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Oryza sativa
cluster # 3652 cluster # 3652       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3652#0 length = 996 sequences # 2  

consensusID : consensus_3652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 996
fasta sequence
                              [AATACCTTGTTTCATTTTGTTCATTTTTCTATGTTTACATGTCCATTTCAGTTGCCAAATTCGCTCTGATCTTGCAGAATTTCATAGCAGAGATGGGATGTGTAGAATCCAAGCTGGTTGCTACTATCAAGTACAGGAGAGTGGAGAAGGATCTTGACAAGAAGGTGGCTGAGGCGCTCAAGGAGAGGACCAAGTCGAAGAAGAAGACCTTCAGGTCAGTGAACAGCATCACCATGGGTCTCCCTCGCTTCAAGGAGGGCCTCAGGAACATCAGGGATGTCTTCGACCAATATGATGAGGACTCAAATGGGACAATTGACAATGAGGAGCTGAGGAACTGCCTGAACAAGCTTCAGGTCCAGATGTCAGAGGAGGAGATCGACAATATTCATCGCTACTGCGACATCGACAACAGGAAGGGGATCCAGTTCCCGGAGTTCGTCGTCTTCCTCTGCCTCATGTACCTTCTTTTTGGTTCAGATGTCACATACCGTGTTTCAGAGTTTGAATCCGCCAGGCTCAACTATGTTTTCGATGAGCTCATCGACGCCTTCCTGTTCTTCGACAAGGATGGAAATGGCAAGATGAAGAGGAAAGATGTAACCCAGAGGATGAATGAGGCTACTCATCAGGAGAGGACCCCCAGCCACATAACGTCACAGCTATTCAAAGAGATGGACCTGAACAGGAATGGCCATGTGAACCTGAAGGAGTTTCTCTTATCAATTATCAGATGGGCAGGAGTTGAGACTGATGATGATGAAGCAAGAAATGAGACTTCTCCATAGTCTTCTTTTATTTTCACATTTGTCAAATGTACAGCAGAAGATCAAATTGCAAGTTCAGAGTGCACTTACTATTCAGTCACATTGCTTCTGTGGCCAAGTATTGTTGAGTGCAATGTTCAGATTGCATGGAACTAAATTATGTATACAAACAAGATGTAAAGGGTATTGTATAAGAAACTAGTAGTCTAAATTGACATGTGTGTTCATT]

[+] EMBL CB628255             [AATACCTTGTTTCATTTTGTTCATTTTTCTATGTTTACATGTCCATTTCAGTTGCCAAATTCGCTCTGATCTTGCAGAATTTCATAGCAGAGATGGGATGTGTAGAATCCAAGCTGGTTGCTACTATCAAGTACAGGAGAGTGGAGAAGGATCTTGACAAGAAGGTGGCTGAGGCGCTCAAGGAGAGGACCAAGTCGAAGAAGAAGACCTTCAGGTCAGTGAACAGCATCACCATGGGTCTCCCTCGCTTCAAGGAGGGCCTCAGGAACATCAGGGATGTCTTCGACCAATATGATGAGGACTCAAATGGGACAATTGACAATGAGGAGCTGAGGAACTGCCTGAACAAGCTTCAGGTCCAGATGTCAGAGGAGGAGATCGACAATATTCATCGCTACTGCGACATCGACAACAGGAAGGGGATCCAGTTCCCGGAGTTCGTCGTCTTCCTCTGCCTCATGTACCTTCTTTTTGGTTCAGATGTCACATACCGTGTTTCAGAGTTTGAATCCGCCAGGCTCAACTATGTTTTCGATGAGCTCATCGACGCCTTCCTGTTCTTCGACAAGGATGGAAATGGCAAGATGAAGAGGAAAGATGTAACCCAGAGGATGAATGAGGCTACTCATCAGGAGAGGACCCCCAGCCACATAACGTCACAGCTATTCAAAGAGATGGACCTGAACAGGAATGGCCATGTGAACCTGAAGGAGTTTCTCTTATCAATTATCAGATGGGCAGGAGTTGAGACTGATGATGATGAAGCAAGAAATGAGACTTCTCCATAGTCTTCTTTTATTT                                                                                                                                                                                                   ]
[-] EMBL CB628256             [                                                                                                                                                                                                                            GAACAGCATCACCATGGGTCTCCCTCGCTTCAAGGAGGGCCTCAGGAACATCAGGGATGTCTTCGACCAATATGATGAGGACTCAAATGGGACAATTGACAATGAGGAGCTGAGGAACTGCCTGAACAAGCTTCAGGTCCAGATGTCAGAGGAGGAGATCGACAATATTCATCGCTACTGCGACATCGACAACAGGAAGGGGATCCAGTTCCCGGAGTTCGTCGTCTTCCTCTGCCTCATGTACCTTCTTTTTGGTTCAGATGTCACATACCGTGTTTCAGAGTTTGAATCCGCCAGGCTCAACTATGTTTTCGATGAGCTCATCGACGCCTTCCTGTTCTTCGACAAGGATGGAAATGGCAAGATGAAGAGGAAAGATGTAACCCAGAGGATGAATGAGGCTACTCATCAGGAGAGGACCCCCAGCCACATAACGTCACAGCTATTCAAAGAGATGGACCTGAACAGGAATGGCCATGTGAACCTGAAGGAGTTTCTCTTATCAATTATCAGATGGGCAGGAGTTGAGACTGATGATGATGAAGCAAGAAATGAGACTTCTCCATAGTCTTCTTTTATTTTCACATTTGTCAAATGTACAGCAGAAGATCAAATTGCAAGTTCAGAGTGCACTTACTATTCAGTCACATTGCTTCTGTGGCCAAGTATTGTTGAGTGCAATGTTCAGATTGCATGGAACTAAATTATGTATACAAACAAGATGTAAAGGGTATTGTATAAGAAACTAGTAGTCTAAATTGACATGTGTGTTCATT]


>consensus_3652#0 AATACCTTGTTTCATTTTGTTCATTTTTCTATGTTTACATGTCCATTTCAGTTGCCAAAT TCGCTCTGATCTTGCAGAATTTCATAGCAGAGATGGGATGTGTAGAATCCAAGCTGGTTG CTACTATCAAGTACAGGAGAGTGGAGAAGGATCTTGACAAGAAGGTGGCTGAGGCGCTCA AGGAGAGGACCAAGTCGAAGAAGAAGACCTTCAGGTCAGTGAACAGCATCACCATGGGTC TCCCTCGCTTCAAGGAGGGCCTCAGGAACATCAGGGATGTCTTCGACCAATATGATGAGG ACTCAAATGGGACAATTGACAATGAGGAGCTGAGGAACTGCCTGAACAAGCTTCAGGTCC AGATGTCAGAGGAGGAGATCGACAATATTCATCGCTACTGCGACATCGACAACAGGAAGG GGATCCAGTTCCCGGAGTTCGTCGTCTTCCTCTGCCTCATGTACCTTCTTTTTGGTTCAG ATGTCACATACCGTGTTTCAGAGTTTGAATCCGCCAGGCTCAACTATGTTTTCGATGAGC TCATCGACGCCTTCCTGTTCTTCGACAAGGATGGAAATGGCAAGATGAAGAGGAAAGATG TAACCCAGAGGATGAATGAGGCTACTCATCAGGAGAGGACCCCCAGCCACATAACGTCAC AGCTATTCAAAGAGATGGACCTGAACAGGAATGGCCATGTGAACCTGAAGGAGTTTCTCT TATCAATTATCAGATGGGCAGGAGTTGAGACTGATGATGATGAAGCAAGAAATGAGACTT CTCCATAGTCTTCTTTTATTTTCACATTTGTCAAATGTACAGCAGAAGATCAAATTGCAA GTTCAGAGTGCACTTACTATTCAGTCACATTGCTTCTGTGGCCAAGTATTGTTGAGTGCA ATGTTCAGATTGCATGGAACTAAATTATGTATACAAACAAGATGTAAAGGGTATTGTATA AGAAACTAGTAGTCTAAATTGACATGTGTGTTCATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)