Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3671 cluster # 3671       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3671#0 length = 1165 sequences # 2  

consensusID : consensus_3671#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1165
fasta sequence
                              [GTGGGCCCCACCCCGTCAGCCTCTCTCCTCTCATCTAGCCGCCGCCTCTCCCCTCGCCGGTGGTGGGTCTCGTCTCGTCTCGCCTCTCCCCCATAAAAGCCAAACCCCCACAAAGCCTTGCCCCTCCTTCTCTTTCATCTCGCCTCCTTCCCCCCCACACCACGTCGCGCGCTCCTGCTGCGCGGACGAGGGAGGAGAGGCTACGCCTGGCCCCTGGCTGCATGCGCCGCCGTTGTGACTGACCATGGACGAGTACAGGCCGCGACGGTCGCCGGCGAGCGAGCGGTTCATCGGGATGTTCGCGTCGCCGTCGTCGTCCCCGACGGAGCCGTCGTTCGTGGCAGGGGATGAGCTCCATGAGGACGACTTCCTGTTCTCGTCCTCCCCCGCCGCGCCGCCCTCGAGCGCGCGGCCGGGGGAGGGGCCCGGGAGCCCGAGCCGGGTGCCGCAGGGGCAGGTCGGGCTCCTCGCCGCGTTGCACGAGGGGGACAAGAGGCTCCTGCTCCGCCGTGGCGGTGGGGGAGGAGGGGGCGCGGCCGCTGCCGCCGCGGCTTCCGCGGGGACGCTGCTCCGTCGCAAGGCGACCATCGCGGCCGCCGCCGCCTCGGCGTCCGGCGGCGGCGGCTCGTTGTCGCCAACCCAGTCCCCGACCTCTGCCGCCCGGGCCATCCCGATGACCCCGAGGCCGAAGAGCGCCGGGCCAGCGGCGCCGTACCACCAGTCGGCTCCGGTGAAGGTGCCCGTCAGCCCGCCCCGGAGGCAGGAGATGTTCAAGTGGGACGAGCTCGACGACGACGACTTCCTCCGGAACGGCGACGCCGCAATGCTGCCCCCGCACGAGATGGTCGCGCGCGCGTCCGCCGGCGGGGCCGGCCCGGCCGCCCCGTTCTCCATGCTCGAGGGCGCCGGTCGCACGCTCAAAGGCCGTGACCTGCGGCGGGTGCGCGACGCCGTGCTCCGGCAAACCGGTTTCCTCGACTGAATTCCGCAAAGGTGATGTGGCTCTGGCTTTTTGTTCAGGTCCGCATGCTCAGTGTCGTAGATCGGTTACATTTTAGGGTATAATTCTAGTGGGTTATTGGTGTAGATCGAGAAGTAAAACCAGATGGTAAGGCAACAAATTGAGTTGGTTTTTTTTTAATGCAACTGCTTGCAATTTTGGTGC]

[+] EMBL AK100104             [GTGGGCCCCACCCCGTCAGCCTCTCTCCTCTCATCTAGCCGCCGCCTCTCCCCTCGCCGGTGGTGGGTCTCGTCTCGTCTCGCCTCTCCCCCATAAAAGCCAAACCCCCACAAAGCCTTGCCCCTCCTTCTCTTTCATCTCGCCTCCTTCCCCCCCACACCACGTCGCGCGCTCCTGCTGCGCGGACGAGGGAGGAGAGGCTACGCCTGGCCCCTGGCTGCATGCGCCGCCGTTGTGACTGACCATGGACGAGTACAGGCCGCGACGGTCGCCGGCGAGCGAGCGGTTCATCGGGATGTTCGCGTCGCCGTCGTCGTCCCCGACGGAGCCGTCGTTCGTGGCAGGGGATGAGCTCCATGAGGACGACTTCCTGTTCTCGTCCTCCCCCGCCGCGCCGCCCTCGAGCGCGCGGCCGGGGGAGGGGCCCGGGAGCCCGAGCCGGGTGCCGCAGGGGCAGGTCGGGCTCCTCGCCGCGTTGCACGAGGGGGACAAGAGGCTCCTGCTCCGCCGTGGCGGTGGGGGAGGAGGGGGCGCGGCCGCTGCCGCCGCGGCTTCCGCGGGGACGCTGCTCCGTCGCAAGGCGACCATCGCGGCCGCCGCCGCCTCGGCGTCCGGCGGCGGCGGCTCGTTGTCGCCAACCCAGTCCCCGACCTCTGCCGCCCGGGCCATCCCGATGACCCCGAGGCCGAAGAGCGCCGGGCCAGCGGCGCCGTACCACCAGTCGGCTCCGGTGAAGGTGCCCGTCAGCCCGCCCCGGAGGCAGGAGATGTTCAAGTGGGACGAGCTCGACGACGACGACTTCCTCCGGAACGGCGACGCCGCAATGCTGCCCCCGCACGAGATGGTCGCGCGCGCGTCCGCCGGCGGGGCCGGCCCGGCCGCCCCGTTCTCCATGCTCGAGGGCGCCGGTCGCACGCTCAAAGGCCGTGACCTGCGGCGGGTGCGCGACGCCGTGCTCCGGCAAACCGGTTTCCTCGACTGAATTCCGCAAAGGTGATGTGGCTCTGGCTTTTTGTTCAGGTCCGCATGCTCAGTGTCGTAGATCGGTTACATTTTAGGGTATAATTCTAGTGGGTTATTGGTGTAGATCGAGAAGTAAAACCAGATGGTAAGGCAACAAATTGAGTTGGTTTTTTTTTAATGCAACTGCTTGCAATTTTGGTGC]
[+] EMBL AU070686             [                                                                                                                                                                            TCCTGCTGCGCGGACGAGGGAGGAGAGGCTACGCCTGNCCCCTGGCTGCATGCGCCGCCGTTGTGACTGACCATGGACGAGTACAGGCCGCGACGGTCGCCGGCGAGCGAGCGGTTCATCGGGATGTTCGCGTCGCCGTCGTCGTCCCCGACGGAGCCGTCGTTCGTGGCAGGGGATNAGCTCCATGAGGACGACTTCCTGTTCTCGTCCTCCCCCGCCGCGCCGNCCTCNAGCGCGCGGCCGGGGGAGGGGCCCGGGAGCCCGAGCCGGGTNCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_3671#0 GTGGGCCCCACCCCGTCAGCCTCTCTCCTCTCATCTAGCCGCCGCCTCTCCCCTCGCCGG TGGTGGGTCTCGTCTCGTCTCGCCTCTCCCCCATAAAAGCCAAACCCCCACAAAGCCTTG CCCCTCCTTCTCTTTCATCTCGCCTCCTTCCCCCCCACACCACGTCGCGCGCTCCTGCTG CGCGGACGAGGGAGGAGAGGCTACGCCTGGCCCCTGGCTGCATGCGCCGCCGTTGTGACT GACCATGGACGAGTACAGGCCGCGACGGTCGCCGGCGAGCGAGCGGTTCATCGGGATGTT CGCGTCGCCGTCGTCGTCCCCGACGGAGCCGTCGTTCGTGGCAGGGGATGAGCTCCATGA GGACGACTTCCTGTTCTCGTCCTCCCCCGCCGCGCCGCCCTCGAGCGCGCGGCCGGGGGA GGGGCCCGGGAGCCCGAGCCGGGTGCCGCAGGGGCAGGTCGGGCTCCTCGCCGCGTTGCA CGAGGGGGACAAGAGGCTCCTGCTCCGCCGTGGCGGTGGGGGAGGAGGGGGCGCGGCCGC TGCCGCCGCGGCTTCCGCGGGGACGCTGCTCCGTCGCAAGGCGACCATCGCGGCCGCCGC CGCCTCGGCGTCCGGCGGCGGCGGCTCGTTGTCGCCAACCCAGTCCCCGACCTCTGCCGC CCGGGCCATCCCGATGACCCCGAGGCCGAAGAGCGCCGGGCCAGCGGCGCCGTACCACCA GTCGGCTCCGGTGAAGGTGCCCGTCAGCCCGCCCCGGAGGCAGGAGATGTTCAAGTGGGA CGAGCTCGACGACGACGACTTCCTCCGGAACGGCGACGCCGCAATGCTGCCCCCGCACGA GATGGTCGCGCGCGCGTCCGCCGGCGGGGCCGGCCCGGCCGCCCCGTTCTCCATGCTCGA GGGCGCCGGTCGCACGCTCAAAGGCCGTGACCTGCGGCGGGTGCGCGACGCCGTGCTCCG GCAAACCGGTTTCCTCGACTGAATTCCGCAAAGGTGATGTGGCTCTGGCTTTTTGTTCAG GTCCGCATGCTCAGTGTCGTAGATCGGTTACATTTTAGGGTATAATTCTAGTGGGTTATT GGTGTAGATCGAGAAGTAAAACCAGATGGTAAGGCAACAAATTGAGTTGGTTTTTTTTTA ATGCAACTGCTTGCAATTTTGGTGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)