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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3709 cluster # 3709       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3709#0 length = 1007 sequences # 2  

consensusID : consensus_3709#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1007
fasta sequence
                              [GGTTTGGACGATCGGTTTACCATATTAAGCATTTTAACTGGTGCCAACGTGGTGATGGAATCTGCCATGTATGATGTTCCTAATTAATCAATACCGGCAAAATGGCAAAATCAAACCGAACCAAGCACTTGTTGTATTCTTAACTACAATCTGTGCATATTCTGATGAAAAAAGTGAGATTGAGGAACTCTCCATGGTTGCGCTATCTGGATGCATTTGGTTGCAGGCTTTTGTTGTGACACTGGACACAAACTCATTCACTTATCCGCAAATCATTCTCATATGGGGAAACTTTATCGCCTTCTACATGATCAACTTAATAGTCAGTGCGGTACCAACACTCCAAATGTATACTATAATGTTCCGCCTGTGTAGCCAACCTTCGTACTGGATAACCATGGGTCTGATTGTTGCGGTAGGAATGGGCCCGGTGCTGGCTTTGAGATACTTCAGGAACATGTTTCGACCTAATGCCATCAACATACTTCAGCAAATCGAGCAATCCAATGGACATACCCATACCACCAGAAATATGGAGTCACGGATCATATCTGCTGGCAGTTATCTCACCCATTTACTAGCCGATTCGCGTCGCAACAGGGGCGCTACCTATCAGCCTCTTCTTTCAGATTCTGTAGCATCTGACGGATGATCTGCTGCACCTATCAGCATCAGACCTTGGCAGCTTGCGTTAACTGTATCTCTTACCAGTGCAATATGCTAGCATGCACACCCATAGTCTCTAACAGCAATAGGATTTACTGATCACACAAAATTCTGAGAGTCAAAGCACAGAAGAAAGTTTCGCAGGTTCATTGCAAAAATGCTGCAATGCCTGGAATTCAGGAAAAAAAATACATGTGTTCCAAATTATCCCAGATGTATAGTTTTGCTGTTAAAACAGAAGTATATATGGCTGTTTTGGTTTGATGGCAATTATTGCCCTACCAATTATTTGGTACTTCGTTCGTCCCAAAATATAAAGCTTCTAGTATTCAGAATTTGTC]

[+] EMBL AK063167             [GGTTTGGACGATCGGTTTACCATATTAAGCATTTTAACTGGTGCCAACGTGGTGATGGAATCTGCCATGTATGATGTTCCTAATTAATCAATACCGGCAAAATGGCAAAATCAAACCGAACCAAGCACTTGTTGTATTCTTAACTACAATCTGTGCATATTCTGATGAAAAAAGTGAGATTGAGGAACTCTCCATGGTTGCGCTATCTGGATGCATTTGGTTGCAGGCTTTTGTTGTGACACTGGACACAAACTCATTCACTTATCCGCAAATCATTCTCATATGGGGAAACTTTATCGCCTTCTACATGATCAACTTAATAGTCAGTGCGGTACCAACACTCCAAATGTATACTATAATGTTCCGCCTGTGTAGCCAACCTTCGTACTGGATAACCATGGGTCTGATTGTTGCGGTAGGAATGGGCCCGGTGCTGGCTTTGAGATACTTCAGGAACATGTTTCGACCTAATGCCATCAACATACTTCAGCAAATCGAGCAATCCAATGGACATACCCATACCACCAGAAATATGGAGTCACGGATCATATCTGCTGGCAGTTATCTCACCCATTTACTAGCCGATTCGCGTCGCAACAGGGGCGCTACCTATCAGCCTCTTCTTTCAGATTCTGTAGCATCTGACGGATGATCTGCTGCACCTATCAGCATCAGACCTTGGCAGCTTGCGTTAACTGTATCTCTTACCAGTGCAATATGCTAGCATGCACACCCATAGTCTCTAACAGCAATAGGATTTACTGATCACACAAAATTCTGAGAGTCAAAGCACAGAAGAAAGTTTCGCAGGTTCATTGCAAAAATGCTGCAATGCCTGGAATTCAGGAAAAAAAATACATGTGTTCCAAATTATCCCAGATGTATAGTTTTGCTGTTAAAACAGAAGTATATATGGCTGTTTTGGTTTGATGGCAATTA                                                                    ]
[-] EMBL BE229334             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tgnGTCACGGAT ATATNTGNTGGCAGTTNT TCACCCATTTACTA CCGATT GGGTTGCAACAGGGGCGCNACCTATCAGCCTNTTCTTTCAGATTCTGTAGCATCTGACGGATGATCTG TGCACCTATCAGCATCAGACCTTGGCAGCTTGCGTTAACTGTATNTCTTACCAGTGCAATATGCTAGCATGCACACCCATAGTCTCTAACAGCAATAGGATTTACTGATCACACAAAATTCTGAGAGTCAAAGCACAGAAGAAAGTTTCGCAGGTTCATTGCAAAAATGCTGCAATGCCTGGAATTCAGGAAAAAAAATACATGTGTTCCAAATTATCCCAGATGTATAGTTTTGCTGTTAAAACAGAAGTATATATGGCTGTTTTGGTTTGATGGCAATTATTGCCCTACCAATTATTTGGTACTTCGTTCGTCCCAAAATATAAAGCTTCTAGTATTCAGAATTTGTC]


>consensus_3709#0 GGTTTGGACGATCGGTTTACCATATTAAGCATTTTAACTGGTGCCAACGTGGTGATGGAA TCTGCCATGTATGATGTTCCTAATTAATCAATACCGGCAAAATGGCAAAATCAAACCGAA CCAAGCACTTGTTGTATTCTTAACTACAATCTGTGCATATTCTGATGAAAAAAGTGAGAT TGAGGAACTCTCCATGGTTGCGCTATCTGGATGCATTTGGTTGCAGGCTTTTGTTGTGAC ACTGGACACAAACTCATTCACTTATCCGCAAATCATTCTCATATGGGGAAACTTTATCGC CTTCTACATGATCAACTTAATAGTCAGTGCGGTACCAACACTCCAAATGTATACTATAAT GTTCCGCCTGTGTAGCCAACCTTCGTACTGGATAACCATGGGTCTGATTGTTGCGGTAGG AATGGGCCCGGTGCTGGCTTTGAGATACTTCAGGAACATGTTTCGACCTAATGCCATCAA CATACTTCAGCAAATCGAGCAATCCAATGGACATACCCATACCACCAGAAATATGGAGTC ACGGATCATATCTGCTGGCAGTTATCTCACCCATTTACTAGCCGATTCGCGTCGCAACAG GGGCGCTACCTATCAGCCTCTTCTTTCAGATTCTGTAGCATCTGACGGATGATCTGCTGC ACCTATCAGCATCAGACCTTGGCAGCTTGCGTTAACTGTATCTCTTACCAGTGCAATATG CTAGCATGCACACCCATAGTCTCTAACAGCAATAGGATTTACTGATCACACAAAATTCTG AGAGTCAAAGCACAGAAGAAAGTTTCGCAGGTTCATTGCAAAAATGCTGCAATGCCTGGA ATTCAGGAAAAAAAATACATGTGTTCCAAATTATCCCAGATGTATAGTTTTGCTGTTAAA ACAGAAGTATATATGGCTGTTTTGGTTTGATGGCAATTATTGCCCTACCAATTATTTGGT ACTTCGTTCGTCCCAAAATATAAAGCTTCTAGTATTCAGAATTTGTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)