Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3784 cluster # 3784       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3784#0 length = 386 sequences # 2  
consensusID : consensus_3784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 386
fasta sequence 
                              [CTACGGCTCCACCTTCTTCGGCTCCCCCTCCGGCCGGTTCTGCGACGGCCGCCTCATCATCGACTTCCTCATGGATGCAATGGATATGCCGTTCCTCAATGCATATTTGGATTCTGTTGGTGCACCTAACTTACGTACGGGTGTTAATTTTGCTCAAGCTGGCTGTTCAATTACTCCAGCAACGGCAACATCTGTCAGCCCATTTTCATTTGGTCTTCAGATTAAGCAATTCTTTGCATTCAAGGACAAAGTTACTAAGCTT-CTATCTAAAGGAGATACGTACAGGAGATATATTCCTCAGTCGGATTACTTTTTCGCGGGGAC-TTTACACGTTTGACATAGGTCAAAATGACCTTGCTGGTGAATTCTACTGGAAAACAGAGGAC]

[+] EMBL OSC28171             [CTACGGCTCCACCTTCTTCGGCTCCCCCTCCGGCCGGTTCTGCGACGGCCGCCTCATCATCGACTTCCTCATGGATGCAATGGATATGCCGTTCCTCAATGCATATTTGGATTCTGTTGGTGCACCTAACTTACGTACGGGTGTTAATTTTGCTCAAGCTGGCTGTTCAATTACTCCAGCAACGGCAACATCTGTCAGCCCATTTTCATTTGGTCTTCAGATTAAGCAATTCTTTGCATTCAAGGACAAAGTTACTAAGCTT CTATCTAAAGGAGATACGTACAGGAGATATATTCCTCAGTCGGATTACTTTTTCGCGGGGAC TTTACACGTTTGACATAGGTCAAAATGACCTTGCTGGTGAATTCTACTGGAAAACAGAGGAC]
[+] EMBL OSC27841             [CTACGGCTCCACCTTCTTCGGCTCCCCCTCCGGCCGGTTCTGCGACGGCCGCCTCATCATCGACTTCCTCATGGATGCAATGGATATGCCGTTCCTCAATGCATATTTGGATTCTGTTGGTGCACCTAACTTACGTGCGGGTGTTAATTTTGCTCAAGCTGGCTGTTCAATTACTCCAGCAACGGCAACATNTGTCAGCCCATTTTCATTTGGTCTTCAGATTAAGCAATTCTTTGCATTCAAGGNCAAAGTTACTAAGCTTCCTATCTAAAGNAGATACGTACAGGGGATATATTCCTCAGTCGGATTAC TTTTCGCGGGGNCTTTTACACGTTTGNCATAGGCCA                                        ]




>consensus_3784#0
CTACGGCTCCACCTTCTTCGGCTCCCCCTCCGGCCGGTTCTGCGACGGCCGCCTCATCAT
CGACTTCCTCATGGATGCAATGGATATGCCGTTCCTCAATGCATATTTGGATTCTGTTGG
TGCACCTAACTTACGTACGGGTGTTAATTTTGCTCAAGCTGGCTGTTCAATTACTCCAGC
AACGGCAACATCTGTCAGCCCATTTTCATTTGGTCTTCAGATTAAGCAATTCTTTGCATT
CAAGGACAAAGTTACTAAGCTTCTATCTAAAGGAGATACGTACAGGAGATATATTCCTCA
GTCGGATTACTTTTTCGCGGGGACTTTACACGTTTGACATAGGTCAAAATGACCTTGCTG
GTGAATTCTACTGGAAAACAGAGGAC

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)