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Oryza sativa
cluster # 3787 cluster # 3787       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3787#0 length = 1166 sequences # 2  

consensusID : consensus_3787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1166
fasta sequence
                              [CAGCAGCTGAGCAGCATCGAGCATCGCTTGTTCATCTCATCTCAAGATCTGTCTCAGATTAATTACCCAGAGCTAGCTGCATCTCACCGGGTAGGAGATTTCGATTGGAATTGCAAGGAAAGGTAGCTAGCTAGCACTTGCTAAGCTAGGCGCCATGGCGGAGCAGCAGCAGCAGCAGCGCGACGGCGACTTCGAGCCGGTCTACGAGTGGCTCGACGCCGGCGCCCACTATCTCCTCCGCGTCAACGTCCCAGAGTTCAAGAAGGAGGAGTTACAGGTGCACGTGGACCCCGCCGGCCGGCTGACCGTCCGCGGCCAGCACGGCGGCCTCCGGCTGAACAAGGTGTTCCAGCTGCCGCCGACGTGCAACCTCGACGCGATCACCGGCAGGCTGGAGGCCAGCGTGCTCGTCCTCACCGTGCCCAAGAAGCCGGCGACAACCGCCGCCGCCGCCGCCCTGCCGCCCAAGGCCAATCAGGAGGAGGAGAAGGAGACCAAGAAGGCTGACGAACACGACGTCGCCGGCAAGCCGCCGCCGCCGCCGCCGAAGACTGACAGTGATCAGTCCGAGCGGAGGACCCAGCTGTCGGCTAGAGAGAAGAAAGAGGAGCCGCCCAAGGCTACAGCCCCCGCGGCGGCGCCGCCGCAGCCGGCGGCGCGAGAGCGTCATGATGAGGAGGAGAAGGCCAGGGCCGAACACAAGGCGAGGCTGTCCCGGGAGGCGGACAGGAGGATCGAGGCGGCGAGGGCGAGGCTGGCGGCGCAGCAGGCCGCCTCGAGGCCCGCGCCGGCGCCGGCGCCGGAGCCGGAGAAGACGGCCGCGTGGTGGAAGGAGCGC-GCGGCGGAGGAAGGGATGAAGCTGGCGGAGGCCATCGGGAAGAACAAGGAGGTGGTCGCCACGGCCGTCGCCGCGTTCGCACTCGGCGTCTTCGTCTCCACCAAACTATTCTCCCGGAACAACTAATTAATTAATCAATTCACCCAGTATCATTCTCACGTGTGTATCGATCGAAATGCATGTATACTTGTACTACATAATATGCATGAGTTAAAATTTCCACTTATCTTTCTTTTGTACTATTGAGCTTACAACAAGCATCGATACAATGTCCGAAACCTTTAGGGGATAATATAAATGGTATTACAATCTTTAGAGGATTAAAAAA]

[+] EMBL AK109917             [CAGCAGCTGAGCAGCATCGAGCATCGCTTGTTCATCTCATCTCAAGATCTGTCTCAGATTAATTACCCAGAGCTAGCTGCATCTCACCGGGTAGGAGATTTCGATTGGAATTGCAAGGAAAGGTAGCTAGCTAGCACTTGCTAAGCTAGGCGCCATGGCGGAGCAGCAGCAGCAGCAGCGCGACGGCGACTTCGAGCCGGTCTACGAGTGGCTCGACGCCGGCGCCCACTATCTCCTCCGCGTCAACGTCCCAGAGTTCAAGAAGGAGGAGTTACAGGTGCACGTGGACCCCGCCGGCCGGCTGACCGTCCGCGGCCAGCACGGCGGCCTCCGGCTGAACAAGGTGTTCCAGCTGCCGCCGACGTGCAACCTCGACGCGATCACCGGCAGGCTGGAGGCCAGCGTGCTCGTCCTCACCGTGCCCAAGAAGCCGGCGACAACCGCCGCCGCCGCCGCCCTGCCGCCCAAGGCCAATCAGGAGGAGGAGAAGGAGACCAAGAAGGCTGACGAACACGACGTCGCCGGCAAGCCGCCGCCGCCGCCGCCGAAGACTGACAGTGATCAGTCCGAGCGGAGGACCCAGCTGTCGGCTAGAGAGAAGAAAGAGGAGCCGCCCAAGGCTACAGCCCCCGCGGCGGCGCCGCCGCAGCCGGCGGCGCGAGAGCGTCATGATGAGGAGGAGAAGGCCAGGGCCGAACACAAGGCGAGGCTGTCCCGGGAGGCGGACAGGAGGATCGAGGCGGCGAGGGCGAGGCTGGCGGCGCAGCAGGCCGCCTCGAGGCCCGCGCCGGCGCCGGCGCCGGAGCCGGAGAAGACGGCCGCGTGGTGGAAGGAGCGC GCGGCGGAGGAAGGGATGAAGCTGGCGGAGGCCATCGGGAAGAACAAGGAGGTGGTCGCCACGGCCGTCGCCGCGTTCGCACTCGGCGTCTTCGTCTCCACCAAACTATTCTCCCGGAACAACTAATTAATTAATCAATTCACCCAGTATCATTCTCACGTGTGTATCGATCGAAATGCATGTATACTTGTACTACATAATATGCATGAGTTAAA                                                                                                                 ]
[+] EMBL BI806404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCGAGAGCGTCATGACGAGGAGGAGAA GCCA GCCCGTACACAAGGCGA GCTGTCCCGGGA GCGGACAGGAGGATCGA GC GCGA GGCGA GCT GCGGC CAGCA GCCGCCTCGAGGCCCGCGCCGGCGCCGGCGCCGGA CCGGAGAAGAC GCCGCGTGGTGGAAGGAGCGCAGCGGCGGAGGAAGGGATGAAGCTGCCGGA GCCATCGGGAAGAACAAGGAGGTGGTCGCCAC GCCGTC CCGCGTTCGCACTCGGCGTCTTCGTCTCCACC AACTATTCTCCCGGAACAACTAATTAATTAATCAATTCACCCAGTATCATTCTCACGTGTGTATCGATCGAAATGCATGTATACTTGTACTACATAATATGCATGAGTTAAAATTTCCACTTATCTTTCTTTTGTACTATTGAGCTTACAACAAGCATCGATACAATGTCCGAAACCTTTAGGGGATAATATAAATGGTATTACAATCTTTAGAGGATTAAAAAA]


>consensus_3787#0 CAGCAGCTGAGCAGCATCGAGCATCGCTTGTTCATCTCATCTCAAGATCTGTCTCAGATT AATTACCCAGAGCTAGCTGCATCTCACCGGGTAGGAGATTTCGATTGGAATTGCAAGGAA AGGTAGCTAGCTAGCACTTGCTAAGCTAGGCGCCATGGCGGAGCAGCAGCAGCAGCAGCG CGACGGCGACTTCGAGCCGGTCTACGAGTGGCTCGACGCCGGCGCCCACTATCTCCTCCG CGTCAACGTCCCAGAGTTCAAGAAGGAGGAGTTACAGGTGCACGTGGACCCCGCCGGCCG GCTGACCGTCCGCGGCCAGCACGGCGGCCTCCGGCTGAACAAGGTGTTCCAGCTGCCGCC GACGTGCAACCTCGACGCGATCACCGGCAGGCTGGAGGCCAGCGTGCTCGTCCTCACCGT GCCCAAGAAGCCGGCGACAACCGCCGCCGCCGCCGCCCTGCCGCCCAAGGCCAATCAGGA GGAGGAGAAGGAGACCAAGAAGGCTGACGAACACGACGTCGCCGGCAAGCCGCCGCCGCC GCCGCCGAAGACTGACAGTGATCAGTCCGAGCGGAGGACCCAGCTGTCGGCTAGAGAGAA GAAAGAGGAGCCGCCCAAGGCTACAGCCCCCGCGGCGGCGCCGCCGCAGCCGGCGGCGCG AGAGCGTCATGATGAGGAGGAGAAGGCCAGGGCCGAACACAAGGCGAGGCTGTCCCGGGA GGCGGACAGGAGGATCGAGGCGGCGAGGGCGAGGCTGGCGGCGCAGCAGGCCGCCTCGAG GCCCGCGCCGGCGCCGGCGCCGGAGCCGGAGAAGACGGCCGCGTGGTGGAAGGAGCGCGC GGCGGAGGAAGGGATGAAGCTGGCGGAGGCCATCGGGAAGAACAAGGAGGTGGTCGCCAC GGCCGTCGCCGCGTTCGCACTCGGCGTCTTCGTCTCCACCAAACTATTCTCCCGGAACAA CTAATTAATTAATCAATTCACCCAGTATCATTCTCACGTGTGTATCGATCGAAATGCATG TATACTTGTACTACATAATATGCATGAGTTAAAATTTCCACTTATCTTTCTTTTGTACTA TTGAGCTTACAACAAGCATCGATACAATGTCCGAAACCTTTAGGGGATAATATAAATGGT ATTACAATCTTTAGAGGATTAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)