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Oryza sativa
cluster # 3794 cluster # 3794       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3794#0 length = 1845 sequences # 2  

consensusID : consensus_3794#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1845
fasta sequence
                              [AGTGAGGCGATCGAGGATGCAGGGCGGCGGCGGCGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACG-AGCAGCACCGGGAGCTGCTCGAGCGGTACGAGCTGGTGCGGGTGCGGGGGCGCGGTA-NTTCGCGCAGGTTTGGGAGGCTCGCCACCGCCGCACCGGCCTCANCTTCGCCGTCAAGATCCTCAACCTCGCCGGACTTCTCGCCAGCGGCATCCCCATCCGCAAAGTGGAGAGGGAGATCGCGGTGATNAGGCTNCTGAACCACCCGCACATNGTG-GTTTCCACGAGGCGATCGCCGGCGGCGACGGCGGCGGCCACGTGTACATCGTGATGGAGCTCGCGACGCAGGGGCAGCTCTACGATTACGTCACCCAGCTCGGCCGCCTCCGCGAGGATGACGCTCGCAGGATCTTCCAGCAGATTATATCAGGCGCCGAATACTGCCACCACAACATGGTCGTCCACCGTGACCTGAAACTGGAGAACATCCTGATGGATTCAGAGATGAACGTCAAGATCGTCGACTTCGGTTTCAGCAAGTTCTTCAGGCACAACAAGGTGCTCAGCGCGTCATGCGGAAGCCGAGAATATGCCGCTCCCGAGCTACTCGCGGGTAGAAAATATGTTGGTCCACCTGTGGATGTTTGGAGCTGTGGAGTAATCCTTTACATCCTCTTCTGTGGACGCTTGCCCTTTGACAGCGCCGATGTATCAGAGCTGCACAGGATCATCAAGAGAGGAGAGTTCAGTATCCCACCGTACGTGCCTGACGACGCGAGGGATCTCATCTCCAGCATGCTGATCGTGAGACCTGACAAGCGCCTCACCATCACCGAGGTCAGGACGCACCGTTGGCTGCAGCACTCCATCCCTCGCTACCTCGCAATGCCTCCTCTCAACGCTCGCACACAGATCACCAGGATTGATGCTGAGACTGTCGACAAGGTAGTCGGCCATGGCTTTGAAAGGAGGTACTTGGTTGAATCACTTGAGAACAGAGTCGAAAACGAGGCGACGGTCGCCTACAACCTGATCCTCAATAAGAAGTTCGATGCCCCAACACGTTATGTTTGGACAATTGACGTCTATCAAGAAGCTGGACAAAGTAACACCACGGGAGCAGCAGAAGCAACTGGCAGCAGTGCTGCCGGAGAGCCGCCGGTCGCCGTCGCCGGAGAAGACGACGGACGCAACAACGGATGGGCGCTGGGAGGGGTGGAGTTCCACGAGTGCCCCCGCGAGGCGATGCGCGCCATCGCGGCGGCGCTGCGCGAGACCGGCGTCGTCTACGCGCACGACGACGACGACCGCGGCCGCTACGGCAAGCTGCTCTGCGCACGCTTCGCCGGCGCCGCCGGCGTCCGCCGCATCATCCGCAGCTACCTCGCCGCCACCGACGACGCGCCCTCCTCTTCCTCCTCCGCCGGTGGTGGCAGTGGCAGAGGTGAGGCTGGCCATGGCGGTGGAGCTCCCGTCGATGATGCTGTCCTCGAGAGCTTGTCTGCGGCTGTGTTCTTTGAAATTCAGCTGTACAAGTCAGAAGGGGAAGGGAATTACCTGATGGATCTGAAGAGGCTTTCTGGCCCACAGCTTCAATACCTCAACATATGCTCAGAGTTAAGCTCCAAGTTGAGAGCAATTAACTGAGGCGGTAGAAATTAACAGTCTCCTCCAAGGAAGAAATAATCTGAGGAAATATTAGGTTATCCCTCTTTTCCTTTTGTTTTTAGTGAAAGGAAAAGCTAGCATGTATGAGAGGGAAAAATTAAAGAAAAATACATATAACACTATGAGATGAACTTATACAAATATATACTAATTAAATCCGTCAGGAT]

[+] EMBL OSC421               [AGTGAGGCGATCGAGGATGCAGGGCGGCGGCGGCGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACG AGCAGCACCGGGAGCTGCTCGAGCGGTACGAGCTGGTGCGGGTGCGGGGGCGCGGTA NTTCGCGCAGGTTTGGGAGGCTCGCCACCGCCGCACCGGCCTCANCTTCGCCGTCAAGATCCTCAACCTCGCCGGACTTCTCGCCAGCGGCATCCCCATCCGCAAAGTGGAGAGGGAGATCGCGGTGATNAGGCTNCTGAACCACCCGCACATNGTG GTTTCCACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK063365             [ GTGAGGCGATCGAGGATGCAGGGCGGCGGCGGCGCGGCGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGCAGCAGCACCGGGAGCTGCTCGAGCGGTACGAGCTGGTGCGGGTGCGGGGGCGCGGTAGCTTCGCGCAGGTGTGGGAGGCTCGCCACCGCCGCACCGGCCTCAGCGTCGCCGTCAAGATCCTCAACCTCGCCGGACTTCTCGCCAGCGGCATCCCCATCCGCAAAGTGGAGAGGGAGATCGCGGTGATGAGGCTGCTGAACCACCCGCACATCGTGCGGTTCCACGAGGCGATCGCCGGCGGCGACGGCGGCGGCCACGTGTACATCGTGATGGAGCTCGCGACGCAGGGGCAGCTCTACGATTACGTCACCCAGCTCGGCCGCCTCCGCGAGGATGACGCTCGCAGGATCTTCCAGCAGATTATATCAGGCGCCGAATACTGCCACCACAACATGGTCGTCCACCGTGACCTGAAACTGGAGAACATCCTGATGGATTCAGAGATGAACGTCAAGATCGTCGACTTCGGTTTCAGCAAGTTCTTCAGGCACAACAAGGTGCTCAGCGCGTCATGCGGAAGCCGAGAATATGCCGCTCCCGAGCTACTCGCGGGTAGAAAATATGTTGGTCCACCTGTGGATGTTTGGAGCTGTGGAGTAATCCTTTACATCCTCTTCTGTGGACGCTTGCCCTTTGACAGCGCCGATGTATCAGAGCTGCACAGGATCATCAAGAGAGGAGAGTTCAGTATCCCACCGTACGTGCCTGACGACGCGAGGGATCTCATCTCCAGCATGCTGATCGTGAGACCTGACAAGCGCCTCACCATCACCGAGGTCAGGACGCACCGTTGGCTGCAGCACTCCATCCCTCGCTACCTCGCAATGCCTCCTCTCAACGCTCGCACACAGATCACCAGGATTGATGCTGAGACTGTCGACAAGGTAGTCGGCCATGGCTTTGAAAGGAGGTACTTGGTTGAATCACTTGAGAACAGAGTCGAAAACGAGGCGACGGTCGCCTACAACCTGATCCTCAATAAGAAGTTCGATGCCCCAACACGTTATGTTTGGACAATTGACGTCTATCAAGAAGCTGGACAAAGTAACACCACGGGAGCAGCAGAAGCAACTGGCAGCAGTGCTGCCGGAGAGCCGCCGGTCGCCGTCGCCGGAGAAGACGACGGACGCAACAACGGATGGGCGCTGGGAGGGGTGGAGTTCCACGAGTGCCCCCGCGAGGCGATGCGCGCCATCGCGGCGGCGCTGCGCGAGACCGGCGTCGTCTACGCGCACGACGACGACGACCGCGGCCGCTACGGCAAGCTGCTCTGCGCACGCTTCGCCGGCGCCGCCGGCGTCCGCCGCATCATCCGCAGCTACCTCGCCGCCACCGACGACGCGCCCTCCTCTTCCTCCTCCGCCGGTGGTGGCAGTGGCAGAGGTGAGGCTGGCCATGGCGGTGGAGCTCCCGTCGATGATGCTGTCCTCGAGAGCTTGTCTGCGGCTGTGTTCTTTGAAATTCAGCTGTACAAGTCAGAAGGGGAAGGGAATTACCTGATGGATCTGAAGAGGCTTTCTGGCCCACAGCTTCAATACCTCAACATATGCTCAGAGTTAAGCTCCAAGTTGAGAGCAATTAACTGAGGCGGTAGAAATTAACAGTCTCCTCCAAGGAAGAAATAATCTGAGGAAATATTAGGTTATCCCTCTTTTCCTTTTGTTTTTAGTGAAAGGAAAAGCTAGCATGTATGAGAGGGAAAAATTAAAGAAAAATACATATAACACTATGAGATGAACTTATACAAATATATACTAATTAAATCCGTCAGGAT]


>consensus_3794#0 AGTGAGGCGATCGAGGATGCAGGGCGGCGGCGGCGCGGCGTCGGCGGCGGCGGCGGCGGC GGCGGCGGCGACGAGCAGCACCGGGAGCTGCTCGAGCGGTACGAGCTGGTGCGGGTGCGG GGGCGCGGTANTTCGCGCAGGTTTGGGAGGCTCGCCACCGCCGCACCGGCCTCANCTTCG CCGTCAAGATCCTCAACCTCGCCGGACTTCTCGCCAGCGGCATCCCCATCCGCAAAGTGG AGAGGGAGATCGCGGTGATNAGGCTNCTGAACCACCCGCACATNGTGGTTTCCACGAGGC GATCGCCGGCGGCGACGGCGGCGGCCACGTGTACATCGTGATGGAGCTCGCGACGCAGGG GCAGCTCTACGATTACGTCACCCAGCTCGGCCGCCTCCGCGAGGATGACGCTCGCAGGAT CTTCCAGCAGATTATATCAGGCGCCGAATACTGCCACCACAACATGGTCGTCCACCGTGA CCTGAAACTGGAGAACATCCTGATGGATTCAGAGATGAACGTCAAGATCGTCGACTTCGG TTTCAGCAAGTTCTTCAGGCACAACAAGGTGCTCAGCGCGTCATGCGGAAGCCGAGAATA TGCCGCTCCCGAGCTACTCGCGGGTAGAAAATATGTTGGTCCACCTGTGGATGTTTGGAG CTGTGGAGTAATCCTTTACATCCTCTTCTGTGGACGCTTGCCCTTTGACAGCGCCGATGT ATCAGAGCTGCACAGGATCATCAAGAGAGGAGAGTTCAGTATCCCACCGTACGTGCCTGA CGACGCGAGGGATCTCATCTCCAGCATGCTGATCGTGAGACCTGACAAGCGCCTCACCAT CACCGAGGTCAGGACGCACCGTTGGCTGCAGCACTCCATCCCTCGCTACCTCGCAATGCC TCCTCTCAACGCTCGCACACAGATCACCAGGATTGATGCTGAGACTGTCGACAAGGTAGT CGGCCATGGCTTTGAAAGGAGGTACTTGGTTGAATCACTTGAGAACAGAGTCGAAAACGA GGCGACGGTCGCCTACAACCTGATCCTCAATAAGAAGTTCGATGCCCCAACACGTTATGT TTGGACAATTGACGTCTATCAAGAAGCTGGACAAAGTAACACCACGGGAGCAGCAGAAGC AACTGGCAGCAGTGCTGCCGGAGAGCCGCCGGTCGCCGTCGCCGGAGAAGACGACGGACG CAACAACGGATGGGCGCTGGGAGGGGTGGAGTTCCACGAGTGCCCCCGCGAGGCGATGCG CGCCATCGCGGCGGCGCTGCGCGAGACCGGCGTCGTCTACGCGCACGACGACGACGACCG CGGCCGCTACGGCAAGCTGCTCTGCGCACGCTTCGCCGGCGCCGCCGGCGTCCGCCGCAT CATCCGCAGCTACCTCGCCGCCACCGACGACGCGCCCTCCTCTTCCTCCTCCGCCGGTGG TGGCAGTGGCAGAGGTGAGGCTGGCCATGGCGGTGGAGCTCCCGTCGATGATGCTGTCCT CGAGAGCTTGTCTGCGGCTGTGTTCTTTGAAATTCAGCTGTACAAGTCAGAAGGGGAAGG GAATTACCTGATGGATCTGAAGAGGCTTTCTGGCCCACAGCTTCAATACCTCAACATATG CTCAGAGTTAAGCTCCAAGTTGAGAGCAATTAACTGAGGCGGTAGAAATTAACAGTCTCC TCCAAGGAAGAAATAATCTGAGGAAATATTAGGTTATCCCTCTTTTCCTTTTGTTTTTAG TGAAAGGAAAAGCTAGCATGTATGAGAGGGAAAAATTAAAGAAAAATACATATAACACTA TGAGATGAACTTATACAAATATATACTAATTAAATCCGTCAGGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)