Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3800 cluster # 3800       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3800#0 length = 626 sequences # 2  

consensusID : consensus_3800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 626
fasta sequence
                              [GATACGCTACGTAAAGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTGCCCCTCAAAACTACTAATGTGTTCTCAGTGACTAGGAAAAAACAAGAAAGATCTGGAGCCTGATAGCCTATATGCACCGTGAACCTTCTTTCCGTACTCTCCAGTTGTGCTGAGCGGCAAGTCCTTATGGTTGGAGCCTTGGAGGCACACAAATCGTCCAGAAGCAACTTGTACACTGCTTTCTGCTGTCTGATGCACAATTTCAGCAGAATAGAGATACTTTAATCCAGGAGCATTTTCGAAATTTAACTAGGAAACATTTTATAGCCTTGGGAAGTTTGCTTGGCTAATGGGTGTCATCTATAGAGGAACAGAGGGAGCAGAACATATTGTGAGTACGATTCCACTCCTAAAACATGCCTAGCCATTTAATGTGGTTGTAGGCTGATCAGTATTTCTGATAGGAACATGTGTTTGAAACTTTTCCCCCACAAGTGTGAATTTACAAACCAGGCCATGCTTGTTCCAACCAAAGTAGGTTATTCTAAAGAGAATGGGAAAAATAGAACAAAGCAAGGCATAAAGAAACAGCAAAAGTAAATGGCATTAAGAAACTATGGATGAATATGACAGTAC]

[+] EMBL CF277273             [GATACGCTACGTAAAGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTGCCCCTCAAAACTACTAATGTGTTCTCAGTGACTAGGAAAAAACAAGAAAGATCTGGAGCCTGATAGCCTATATGCACCGTGAACCTTCTTTCCGTACTCTCCAGTTGTGCTGAGCGGCAAGTCCTTATGGTTGGAGCCTTGGAGGCACACAAATCGTCCAGAAGCAACTTGTACACTGCTTTCTGCTGTCTGATGCACAATTTCAGCAGAATAGAGATACTTTAATCCAGGAGCATTTTCGAAATTTAACTAGGAAACATTTTATAGCCTTGGGAAGTTTGCTTGGCTAATGGGTGTCATCTATAGAGGAACAGAGGGAGCAGAACATATTGTGAGTACGATTCCACTCCTAAAACATGCCTAGCCATTTAATGTGGTTGTAGGCTGATCAGTATTTCTGATAGGAACATGTGTTTGAAACTTTTCCCCCACAAGTGTGAATTTACAAACCAGGCCATGCTTGTTCCAACCAAAGTAGGTTATTCTAAAGAGAATGGGAAAAATAGAACAAAGCAAGGCATAAAGAAACAGCAAAAGTAAATGGCATTAAGAAACTATGGATGAATATGACAGTAC]
[-] EMBL BI803021             [                                       TTTTTTTTTTGGCCATCAAAACTACTAATGTGTTCTCAGTGACTAGGAAAAAACAAGAAAGGTCTGAAGCCTGATAGCCTATATGCACTGTGAACCTTCTTTCCATACTCTCCAGTTGTGCTGAGCTGCAGGTCCTCAGGGTT GAG CTTGGAGGCACACAAATCGTCCAGAAGCAACATGGACACTG TTTCTGCTGTCTGATGCACAATTTCAGCAGAATAGAGATACTTTAATCCAGGA                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_3800#0 GATACGCTACGTAAAGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTGCCCCTCAAAA CTACTAATGTGTTCTCAGTGACTAGGAAAAAACAAGAAAGATCTGGAGCCTGATAGCCTA TATGCACCGTGAACCTTCTTTCCGTACTCTCCAGTTGTGCTGAGCGGCAAGTCCTTATGG TTGGAGCCTTGGAGGCACACAAATCGTCCAGAAGCAACTTGTACACTGCTTTCTGCTGTC TGATGCACAATTTCAGCAGAATAGAGATACTTTAATCCAGGAGCATTTTCGAAATTTAAC TAGGAAACATTTTATAGCCTTGGGAAGTTTGCTTGGCTAATGGGTGTCATCTATAGAGGA ACAGAGGGAGCAGAACATATTGTGAGTACGATTCCACTCCTAAAACATGCCTAGCCATTT AATGTGGTTGTAGGCTGATCAGTATTTCTGATAGGAACATGTGTTTGAAACTTTTCCCCC ACAAGTGTGAATTTACAAACCAGGCCATGCTTGTTCCAACCAAAGTAGGTTATTCTAAAG AGAATGGGAAAAATAGAACAAAGCAAGGCATAAAGAAACAGCAAAAGTAAATGGCATTAA GAAACTATGGATGAATATGACAGTAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)