Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3815 cluster # 3815       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3815#0 length = 811 sequences # 2  

consensusID : consensus_3815#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 811
fasta sequence
                              [CTCTTTTATTTTTTTTTATATCTTTAAAAAACCAGCCAACCACCCCCATTATTCTATACCAGCAGAGCGATGCGATTCATTTTCTTTAATCATTTACAACACATGTACAGCTTCACTAATTACAGCAAAACCTCCTAAGCTCTATGCTTACACAAAGGCGTTTTGCCCCTTGGCCCCTTAGTATACAAGCCCAAAAAGAATTGCAAAGAAACAATGCAAGGAAAAAGTGAACACAAATATACAACCAACGAACCAATCAATAAAAATCAGAAACCTATAACCTCCCCTAGCAATCTACTCTTCAATGGCCTGCTATCTGGTATAAAAATGAATTATGCGAACTGTACACCCTATCCTACGGATAGGAACAACTGATTTATCCACAACTTGCAAAGCTCCATGGTGAGAAAAGTTAACTGTTCCCCCTTTGCAATAAAAACGCAAAGCTTGGGTTTTCACGAACAAAAGGTAGCAAATCATCTTCAGCCACCTCAATGATTGGCATTGTCTTTGCAATATCATCAAGTGAAAAAGGTATGCATGAATCATCATCTAGCAGTATGGAAAAGGTTGTGACTGTATTTGATTCCTCGCGTACTGCACTTTTCAAGCTTGATGTGAACTCCGCTGAGATAGCGTTTGAACCATTGATGTCATCCCAGTACATACTAACTATGCGCTCAAGCTGTTGTATGCTGAGTGCAGGGCACACATCAGTGCGTATCTCTTTCAGTGTCCTCATTGGTTTGAGGGAAATCACCAAGAAATCAACAGCCTGTCTGATATGCTTCAGTGCATCCCAGGCTGAACC]

[+] EMBL CB633579             [CTCTTTTATTTTTTTTTATATCTTTAAAAAACCAGCCAACCACCCCCATTATTCTATACCAGCAGAGCGATGCGATTCATTTTCTTTAATCATTTACAACACATGTACAGCTTCACTAATTACAGCAAAACCTCCTAAGCTCTATGCTTACACAAAGGCGTTTTGCCCCTTGGCCCCTTAGTATACAAGCCCAAAAAGAATTGCAAAGAAACAATGCAAGGAAAAAGTGAACACAAATATACAACCAACGAACCAATCAATAAAAATCAGAAACCTATAACCTCCCCTAGCAATCTACTCTTCAATGGCCTGCTATCTGGTATAAAAATGAATTATGCGAACTGTACACCCTATCCTACGGATAGGAACAACTGATTTATCCACAACTTGCAAAGCTCCATGGTGAGAAAAGTTAACTGTTCCCCCTTTGCAATAAAAACGCAAAGCTTGGGTTTTCACGAACAAAAGGTAGCAAATCATCTTCAGCCACCTCAATGATTGGCATTGTCTTTGCAATATCATCAAGTGAAAAAGGTATGCATGAATCATCATCTAGCAGTATGGAAAAGGTTGTGACTGTATTTGATTCCTCGCGTACTGCACTTTTCAAGCTTGATGTGAACTCCGCTGAGATAGCGTTTGAACCATTGATGTCATCCCAGTACATACTAACTATGCGCTCAAGCTGTTGTATGCTGAGTGCAGGGCACACATCAGTGCGTATCTCTTTCAGTGTCCTCATTGGTTTGAGGGAAATCACCAAGAAATCAACAGCCTGTCTGATATGCTTCAGTGCATCCCAGGCTGAACC]
[+] EMBL CB634440             [ cccTTAATTTTTTTTTATATCTTTAAAAAACCAGCCAACCCCCTCCATTATTCTATACCAGCAGAGCGATGCGATTCATTTTCTTTAATCATTTACAACACATGTACAGCTTCACTAATTACAGCAAAACCTCCTAAGCTCTATGCTTACACAAAGGCGTTTTGCCCCTTGGCCCCTTAGTATACAAGCCCAAAAAGAATTGCAAAGAAACAATGCAAGGAAAAAGTGAACACAAATATACAACCAACGAACCAATCAATAAAAATCAGAAACCTATAACCTCCCCTAGCAATCTACTCTTCAATGGCCTGCTATCTGGTATAAAAATGAATTATGCGAACTGTACACCCTATCCTACGGATAGGAACAACTGATTTATCCACAACTTGCAAAGCTCCATGGTGAGAAAAGTTAACTGTTCCCCCTTTGCAATAAAAACGCAAAGCTTGGGTTTTCACGAACAAAAGGTAGCAAATCATCTTCAGCCACCTCAATGATTGGCATTGTCTTTGCAATATCATCAAGTGAAAAAGGTATGCATGAATCATCATCTAGCAGTATGGAAAAGGTTGTGACTGTATTTGATTCCTCGCGTACTGCACTTTTCAAGCTTGATGTGAACTCCGCTGAGATAGCGTTTGAACCATTGATGTCATCCCAGTACATACTAACTATGCGCTCAAGCTGTTGTATGCTGAGTGCAGGGCACACATCAGTGCGTATCTCTTTCAGTGTCCTCATTGGTTTGAGGGAAATCACCAAGAAATCAACAGCCTGTCTGATATGCTTCAGTGCATCCCAGGCTGAAac]


>consensus_3815#0 CTCTTTTATTTTTTTTTATATCTTTAAAAAACCAGCCAACCACCCCCATTATTCTATACC AGCAGAGCGATGCGATTCATTTTCTTTAATCATTTACAACACATGTACAGCTTCACTAAT TACAGCAAAACCTCCTAAGCTCTATGCTTACACAAAGGCGTTTTGCCCCTTGGCCCCTTA GTATACAAGCCCAAAAAGAATTGCAAAGAAACAATGCAAGGAAAAAGTGAACACAAATAT ACAACCAACGAACCAATCAATAAAAATCAGAAACCTATAACCTCCCCTAGCAATCTACTC TTCAATGGCCTGCTATCTGGTATAAAAATGAATTATGCGAACTGTACACCCTATCCTACG GATAGGAACAACTGATTTATCCACAACTTGCAAAGCTCCATGGTGAGAAAAGTTAACTGT TCCCCCTTTGCAATAAAAACGCAAAGCTTGGGTTTTCACGAACAAAAGGTAGCAAATCAT CTTCAGCCACCTCAATGATTGGCATTGTCTTTGCAATATCATCAAGTGAAAAAGGTATGC ATGAATCATCATCTAGCAGTATGGAAAAGGTTGTGACTGTATTTGATTCCTCGCGTACTG CACTTTTCAAGCTTGATGTGAACTCCGCTGAGATAGCGTTTGAACCATTGATGTCATCCC AGTACATACTAACTATGCGCTCAAGCTGTTGTATGCTGAGTGCAGGGCACACATCAGTGC GTATCTCTTTCAGTGTCCTCATTGGTTTGAGGGAAATCACCAAGAAATCAACAGCCTGTC TGATATGCTTCAGTGCATCCCAGGCTGAACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)