cluster # 3819

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Oryza sativa
cluster # 3819 cluster # 3819 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3819#0 length = 660 sequences # 2

consensusID : consensus_3819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 660
fasta sequence

                              [CCGGGTTTCATGAATTCTGCAACGAGTACAAAACATTCATTCATCTAAAAAGGGTCATTACCAAGAGGGCTACACAAGAGAACAGGAATCCCCAACTGATAAGATCGATCATTCATGTCGATTATTCTGCGAAAATGTGTTGTTTTATTATTCACGCATATATGCAAAGCCTTGCTAGCTCACACACACACACACACATTTTTTTGATGATGAAGTGATTAACTCATCACAAAACACGCTATACATCAAACACCCATCTTAATTAAACTCTCAGTGGTAATTAATTACACCTTAATTTTTATCAAGTAATAATAGTAATAATACTGTGGTGTGTTAAGAGGTATAGATCTCTGTCAGTAGCGATTCCTCCAGTACTCCTCGCTCGCCGCGCGCTCGCGCCTCAGCCGCTCCTGCACCCTCGAGATGTACATCGCCGCGCGGCGGTCCACGTCGGCGTCGCCGCCGCCGCCGCCGCCGCCGTGGGCGTGGGCGTGCCCGACGACGGTGACCGCAGACGGCGGCGGCGCTGGCGCCGGCCACGGCGCCGCGGCGGAATAAGGCACGGGGGCGGCGGCGGCGGGGGCGACTACGACGACGGCCGCCGGCGACCGGGGGTAGAAGGCCGGCATCACCCCTGCGGCGGTCGACTTGAGCTTGATG]

[-] EMBL CB679149             [CCGGGTTTCATGAATTCTGCAACGAGTACAAAACATTCATTCATCTAAAAAGGGTCATTACCAAGAGGGCTACACAAGAGAACAGGAATCCCCAACTGATAAGATCGATCATTCATGTCGATTATTCTGCGAAAATGTGTTGTTTTATTATTCACGCATATATGCAAAGCCTTGCTAGCTCACACACACACACACACATTTTTTTGATGATGAAGTGATTAACTCATCACAAAACACGCTATACATCAAACACCCATCTTAATTAAACTCTCAGTGGTAATTAATTACACCTTAATTTTTATCAAGTAATAATAGTAATAATACTGTGGTGTGTTAAGAGGTATAGATCTCTGTCAGTAGCG                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB633683             [                                                                                                                                                                                                                    AAGTGATTAACTCATCACCAAACTCTCTATACATCAAACACCCATCTTAATTAAACTCTCAGTGCTAATTAATTACACCTTAATTTTTATCAAGTAATAATAGTAATAATACTGTGGTGTGTTAAGAGCTATAGATCACTGTCAGTAGCGATTCCTCCAGTACTCCTCGCTCGCCGCGCGCTCGCGCCTCAGCCGCTCCTGCACCCTCGAGATGTACATCGCCGCGCGGCGGTCCACGTCGGCGTCGCCGCCGCCGCCGCCGCCGCCGTGGGCGTGGGCGTGCCCGACGACGGTGACCGCAGACGGCGGCGGCGCTGGCGCCGGCCACGGCGCCGCGGCGGAATAAGGCACGGGGGCGGCGGCGGCGGGGGCGACTACGACGACGGCCGCCGGCGACCGGGGGTAGAAGGCCGGCATCACCCCTGCGGCGGTCGACTTGAGCTTGATG]




>consensus_3819#0
CCGGGTTTCATGAATTCTGCAACGAGTACAAAACATTCATTCATCTAAAAAGGGTCATTA
CCAAGAGGGCTACACAAGAGAACAGGAATCCCCAACTGATAAGATCGATCATTCATGTCG
ATTATTCTGCGAAAATGTGTTGTTTTATTATTCACGCATATATGCAAAGCCTTGCTAGCT
CACACACACACACACACATTTTTTTGATGATGAAGTGATTAACTCATCACAAAACACGCT
ATACATCAAACACCCATCTTAATTAAACTCTCAGTGGTAATTAATTACACCTTAATTTTT
ATCAAGTAATAATAGTAATAATACTGTGGTGTGTTAAGAGGTATAGATCTCTGTCAGTAG
CGATTCCTCCAGTACTCCTCGCTCGCCGCGCGCTCGCGCCTCAGCCGCTCCTGCACCCTC
GAGATGTACATCGCCGCGCGGCGGTCCACGTCGGCGTCGCCGCCGCCGCCGCCGCCGCCG
TGGGCGTGGGCGTGCCCGACGACGGTGACCGCAGACGGCGGCGGCGCTGGCGCCGGCCAC
GGCGCCGCGGCGGAATAAGGCACGGGGGCGGCGGCGGCGGGGGCGACTACGACGACGGCC
GCCGGCGACCGGGGGTAGAAGGCCGGCATCACCCCTGCGGCGGTCGACTTGAGCTTGATG

clustalw multiple alignements is not computed in this case