Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3833 cluster # 3833       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3833#0 length = 455 sequences # 2  
consensusID : consensus_3833#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 455
fasta sequence 
                              [TCATGTAAACATGACAATCATATTTGCGGANAATNGCTGCTATCTGCAAGCTGCTTGGATTATGACATTTAGCTACTTTTGCTCTGGCGTTGCACCAAATTTTATTGTGGACCAAATGGATTCTCCATGGGCCCAAATCTAGCCTGTTCCTTAGCAAAAGAGTAAAGATGATTTATGCTGTCATGTGGGAAACCCCCTATCAGTGCCAACATGGGGCCATGAACACTACAGCCATCGCACAAGCCAGGCCAGTGCTGCCTGAGGGCTGGTTGTCTTCCCTGTGCATTGCCATTCAGTTAGGACTTTGTGAGTTGGACATACATTAAATTATAAGAGATTGGTTGAGTGTAAAGTGTACTTCAGTTTAAAAGGTGTTGGATTCTTAATCTTCCTCGATCTGTTAAGAGAGACCAGGGGGTATCTCTATCTTCCCTCTCTCGGGATTGCTGAGCTCA]

[+] EMBL OSR19621A            [TCATGTAAACATGACAATCATATTTGCGGANAATNGCTGCTATCTGCAAGCTGCTTGGATTATGACATTTAGCTACTTTTGCTCTGGCGTTGCACCAAATTTTATTGTGGACCAAATGGATTCTCCATGGGCCCAAATCTAGCCTGTTCCTTAGCAAAAGAGTAAAGATGATTTATGCTGTCATGTGGGAAACCCCCTATCAGTGCCAACATGGGGCCATGAACACTACAGCCATCGCACAAGCCAGGCCAGTGCTGCCTGAGGGCTGGTTGTCTTCCCTGTGCATTGCCATTCAGTTAGGACTTTGTGAGTTGGACATACATTAAATTATAAGAGATTGGTTGAGTGTAAAGTGTACTTCAGTTTAAAAGGTGTTGGATTCTTAATCTTCCTCGATCTGTTAAGAGAGACCAGGGGGTATCTCTATCTTCCCTCTCTCGGGATTGCTGAGCTCA]
[+] EMBL OSR20802A            [TCATGTAAACATGACAATCATATTTGCGGANAATAGCTGCTATCTGCAAGCTGCTTGGATTATGACATTTAGCTACTTTTGCTCTGGCGTTGCACCAAATTTTATTGTGGACCAAATGGATTCTCCATGGGCCCAAATCTAGCCTGTTCCTTAGCAAAAGAGTAAAGATGATTTATGCTGTCATGTGGGAAACCCCCTATCAGTGCCAACATGGGGCCATGAACACTACAGCCATCGCACAAGCCAGGCCAGTNCTGCCTGAGGGCTGGTTGTCTTCCCTGTGCATTGCCATTCAGTTAGGACTTTGTGAGTTGGACATACATTAAATTATAAGAGA                                                                                                                      ]




>consensus_3833#0
TCATGTAAACATGACAATCATATTTGCGGANAATNGCTGCTATCTGCAAGCTGCTTGGAT
TATGACATTTAGCTACTTTTGCTCTGGCGTTGCACCAAATTTTATTGTGGACCAAATGGA
TTCTCCATGGGCCCAAATCTAGCCTGTTCCTTAGCAAAAGAGTAAAGATGATTTATGCTG
TCATGTGGGAAACCCCCTATCAGTGCCAACATGGGGCCATGAACACTACAGCCATCGCAC
AAGCCAGGCCAGTGCTGCCTGAGGGCTGGTTGTCTTCCCTGTGCATTGCCATTCAGTTAG
GACTTTGTGAGTTGGACATACATTAAATTATAAGAGATTGGTTGAGTGTAAAGTGTACTT
CAGTTTAAAAGGTGTTGGATTCTTAATCTTCCTCGATCTGTTAAGAGAGACCAGGGGGTA
TCTCTATCTTCCCTCTCTCGGGATTGCTGAGCTCA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)