Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3856 cluster # 3856       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3856#0 length = 692 sequences # 2  

consensusID : consensus_3856#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 692
fasta sequence
                              [AGCAAGAAGCTCTATCTTCTCCTCTCCTTGTCAACCTAGCTAGTAGCTAGGTAAGTTACCTCGATCGTGCAGGCGATGGCAACGCCGGCAGGAGGACGGCCGTCGCAGCCGCAGCCGCAGGCGCAGCAGCTGTCGGTGGATTTCGAGGCGCTGAGCTACATCAGCAGCCTCGTGGAGGCGTTCCAGGCGTTCGACTCCGACAACGACGGCCTCGTCACGGCGCCGGAGCTGAGGGGCCTCCTGGCGTCGCTCGGCCTCGACAAGCCGGAGCACGAGGTGCGCGACATGCTGGCGCGCGCCGACGCCGACCGCGACGGGAAGCTCAGCGTGGAGGAGCTCCTGGACGTGATGAACGCCGGGCAGCTCGGCCTGGGCGCGCTCGGCGCGCTGCTGCAGTCCGCCGTGCCGGCGCTCGAGTCCGCGGCGGGGCCCGACGGCGTCCTCGGCGCCGATGAGCTCGCCAGGCTGCTCAGCGTCATGGGCACCGCCAGCGTTGAGGACTGCATGGAGATCATCGCCTGCATGGACGGCGACGGCGATGGCGCCATCAGTGTCGAGGAGTTCAGGCTCATGGCCCAGCTGCTCTAGCTTACTATCCACTCCGTAGGCTCTACCAAACATACAACTTTGCAAGAAGCTACGCGTTGTTGGAGAATACTTGATGATGGTTTTAGCAATAAGAGATCGAGTTT]

[+] EMBL AK070430             [AGCAAGAAGCTCTATCTTCTCCTCTCCTTGTCAACCTAGCTAGTAGCTAGGTAAGTTACCTCGATCGTGCAGGCGATGGCAACGCCGGCAGGAGGACGGCCGTCGCAGCCGCAGCCGCAGGCGCAGCAGCTGTCGGTGGATTTCGAGGCGCTGAGCTACATCAGCAGCCTCGTGGAGGCGTTCCAGGCGTTCGACTCCGACAACGACGGCCTCGTCACGGCGCCGGAGCTGAGGGGCCTCCTGGCGTCGCTCGGCCTCGACAAGCCGGAGCACGAGGTGCGCGACATGCTGGCGCGCGCCGACGCCGACCGCGACGGGAAGCTCAGCGTGGAGGAGCTCCTGGACGTGATGAACGCCGGGCAGCTCGGCCTGGGCGCGCTCGGCGCGCTGCTGCAGTCCGCCGTGCCGGCGCTCGAGTCCGCGGCGGGGCCCGACGGCGTCCTCGGCGCCGATGAGCTCGCCAGGCTGCTCAGCGTCATGGGCACCGCCAGCGTTGAGGACTGCATGGAGATCATCGCCTGCATGGACGGCGACGGCGATGGCGCCATCAGTGTCGAGGAGTTCAGGCTCATGGCCCAGCTGCTCTAGCTTACTATCCACTCCGTAGGCTCTACCAAACATACAACTTTGCAAGAAGCTACGCGTTGTTGGAGAATACTTGATGATGGTTTTAGCAATAAGAGATCGAGTTT]
[+] EMBL AU183267             [                                        TAGTAGCTAGGTAAGTTACCTCGATCGTGCAGGCGATGGCAACGCCGGCAGGAGGACGGCCGTCGCAGCCGCAGCCGCAGGCGCAGCAGCTGTCGGTGGATTTCGAGGCGCTGAGCTACATCAGCAGCCTCGTGGAGGCGTTCCAGGCGTTCGACTCCGACAACGACGGCCTCGTCACGGCGCCGGAGCTGAGGGGCCTCCTGGCGTCGCTCGGCCTCGACAAGCCGGAGCACGAGGTGCGCGACATGCTGGCGCGCGCCGACGCCGACCGCGACGGGAAGCTCAGCGTGGAGGAGCTCCTGGACGTGATGAACGCCGGGCAGCTCGGCCTGGGCGCGCTCGGCGCGCTGCTGCAGTCCGCCGTGCCGGCGCTCGAGTCCGCGGCGGGGCCCGACGGCGTCCTCGGCGCCGATGAG                                                                                                                                                                                                                                            ]


>consensus_3856#0 AGCAAGAAGCTCTATCTTCTCCTCTCCTTGTCAACCTAGCTAGTAGCTAGGTAAGTTACC TCGATCGTGCAGGCGATGGCAACGCCGGCAGGAGGACGGCCGTCGCAGCCGCAGCCGCAG GCGCAGCAGCTGTCGGTGGATTTCGAGGCGCTGAGCTACATCAGCAGCCTCGTGGAGGCG TTCCAGGCGTTCGACTCCGACAACGACGGCCTCGTCACGGCGCCGGAGCTGAGGGGCCTC CTGGCGTCGCTCGGCCTCGACAAGCCGGAGCACGAGGTGCGCGACATGCTGGCGCGCGCC GACGCCGACCGCGACGGGAAGCTCAGCGTGGAGGAGCTCCTGGACGTGATGAACGCCGGG CAGCTCGGCCTGGGCGCGCTCGGCGCGCTGCTGCAGTCCGCCGTGCCGGCGCTCGAGTCC GCGGCGGGGCCCGACGGCGTCCTCGGCGCCGATGAGCTCGCCAGGCTGCTCAGCGTCATG GGCACCGCCAGCGTTGAGGACTGCATGGAGATCATCGCCTGCATGGACGGCGACGGCGAT GGCGCCATCAGTGTCGAGGAGTTCAGGCTCATGGCCCAGCTGCTCTAGCTTACTATCCAC TCCGTAGGCTCTACCAAACATACAACTTTGCAAGAAGCTACGCGTTGTTGGAGAATACTT GATGATGGTTTTAGCAATAAGAGATCGAGTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)