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Oryza sativa
cluster # 3864 cluster # 3864       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3864#0 length = 2491 sequences # 2  

consensusID : consensus_3864#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2491
fasta sequence
                              [TGCACCTTTACCAGTCTCTGTCAAACGCAATAAATGACATCACCATGCATCAGCCTTTTCGGGATATCTGCTTCCGTAATACACATCAGCTGTATGATCTCCTGGCCGCTGATGTTGGTGATTCAGAGTTTGCGGCAATGCTTGAAATGCATAACCCAGATAAGGGTTCAAAAGCAATGGCATTTATACCTCTTCGTGCTCGGCTATTTTTGAATTCCCTTGTTGATTGTAAAACAGCTGGGGCAATTCTAGGAGATGGTTCGTGTGCTTCAGAGTCTGGCGAGGCAAAAGAGAGTGAGTTGAAACTCTCTGACAGACTTATACAACTACTGGATACCCTCCAACCAGCAAAGTTCCATTGGCAATGGGTTGAGTTGAGGTTTCTTTTAGATGAACAAGCTCTTCTGGAAAAAGTTGCAGCTGGTAATACATCAGTCGCAGAAGCAATCCAGTCGCTTTCCCCTAATGCTGAAAGCTTTGCCCTTTCTGATAGTGAGAAAGGGTTCACTGAAATCATCCTGTCAAGATTACTTGCCAGACCTGATGCTGCTCCCCTCTACTCAGAACTTGTTCATCTTCTTGGGAAGCTTCAAGAGTCACTTGTCGTGGATGTCAAATGGCTCCTGCAAGGGCAAGATGCCCTTCTGGGACGCAAATCCACAAGGCAGCAGCTTGTTCATATTGCTCAAAGAAAGGGCCTCTCGACAAAGACTCAGGTTTGGAAACCATGGGGCTGGGCCAGCTTGCTTAGTGATGTAATAGCCAGTANAAGTACCAAGAGGAAATTGGAAGTCACTTCAATTGAGGAAGGAGAAGTTGTGGATGACTCTGCTGATGCTAAAAGGCCTAGCAAGGCTAACCCCCATAATGTGGACAGAAGCTTCGAGGGGATTAGATCTATTAATAAATATTTGACTGAGAAAGCCCTTTCAGAATTAATGTTGCCATGCATTGATAGAAGCTCTGCTGAATTTCGTAGTATATTTGCTGGTGATTTGGTGAAGCAGATGGGGACTATCAGTGAACACATCAAAGCAATAGCAAGGAATGGTACGAAACAATCTGGTTTAGTTCCATCAGGAACTGAAGCAGCATCGAACAAATCCAGTAGCCGTAAAGGGATTCGAGGTGGAAGTCCAAATATTGGACGGCGAGCTCCAGTTGGTAATGATCCAACTCCTCCTTCAGCATCTGCTCTGCGAGCAACAGTGTGGTTGCGCCTCCAATTTATCATTAGGTTGCTTCCATTAATCATGGCGGATAGGAGTATGAGACATACACTTGCTTCTGCAATTCTAGGCCTTCTTTCAGCACGCATAATTTATGAAGATGCAGATTTGCCCCTTCCTCCTACCAACACTACCGTTTTAAGGCGGGACGTGGATTCTTTGCTGGAACCTCCCTTAGATGTCCTTCTCGACCGCCCTGGTGAAAGTCTTTTTGAGAGGCTCATATGTGTTTTCCATGCATTACTTGGCAATGGCAAACCAAGTTGGCTGAAGTCAAAGTCAGTTTCTAAGTCGACCACTAGAACTCCAAGAGATTTCCCTGCATTTGATAGTGAAGCAGCTGAGGGCTTACAGTCTGTACTAGATCACCTGGAGATGCCTGGAATAATCAGGCGAAGAATCCAAGCAGCTATGCCAGTTCTCCCACCTTCTCGCCACCCTTGTATATCATGCCAACCACCTCAGTTGTCTTTGGCCGCATTATCACCACTCCAGAGCGGTACATCTACTTCAGGTCCTCAACAGAAAGGCAACTCTACTAGCTGGGTTCCTACTAATGTATCGATCAGAAACAAGGCGGCGTTTGCAACCCAAGATCCTGAGATGGAAGTAGATCCATGGACATTGCTTGAGGATGGCACAAGTTGCCCCTCCATGTCATCTGGAAGTAACAGTTCCAGTGGCATGGCTGGCGATCATGGTAATTTGAAAGCTTGTAGCTGGCTCAAGGGTGCAGTGAGAGTGAGGAGGACAGAACTAACCTATATTGGGTCCCTGGATGATGATAGCTGATCATGCTTGTACGCTATCACTGCTGACGTTGCACAAATTCAAGATGGGGATTGAGGAAAATTTTTCGGTTTTGGACCAGGTTGGGCTTGAGTGGTATACATGCCGCCACCATGATAAACTCCACTATTGAAGTGAGTTTTGTGTTGAAATTGTGGCCTTGTGGGGGCGGCCTTGATGTAGAATATCTTACACCCTGGGGTATTGTTGTTACTAGGGCCTGCGGGAGCGACCTTGTACATAATGTAACATTAATCCATTTGTCAAGCAAGCTGTCCCTGAAAGAAGTTGCCCCAGGGCCCTGTTTGTAGCTTATATTCAAAGTTAGGAAGATATGCATGCATGCAGTAGCTGATGAGTCGAAAGGAATGTATTGGTTTTTGTTTTGCTCGATATGTAACCTAGTGTGAGTTAGCCCCTGCTCAAAACCGAGGGTTGATATTATACAACATTATGTATATCATATGGTGGCT]

[+] EMBL CB635119             [TGCACCTTTACCAGTCTCTGTCAAACGCAATAAATGACATCACCATGCATCAGCCTTTTCGGGATATCTGCTTCCGTAATACACATCAGCTGTATGATCTCCTGGCCGCTGATGTTGGTGATTCAGAGTTTGCGGCAATGCTTGAAATGCATAACCCAGATAAGGGTTCAAAAGCAATGGCATTTATACCTCTTCGTGCTCGGCTATTTTTGAATTCCCTTGTTGATTGTAAAACAGCTGGGGCAATTCTAGGAGATGGTTCGTGTGCTTCAGAGTCTGGCGAGGCAAAAGAGAGTGAGTTGAAACTCTCTGACAGACTTATACAACTACTGGATACCCTCCAACCAGCAAAGTTCCATTGGCAATGGGTTGAGTTGAGGTTTCTTTTAGATGAACAAGCTCTTCTGGAAAAAGTTGCAGCTGGTAATACATCAGTCGCAGAAGCAATCCAGTCGCTTTCCCCTAATGCTGAAAGCTTTGCCCTTTCTGATAGTGAGAAAGGGTTCACTGAAATCATCCTGTCAAGATTACTTGCCAGACCTGATGCTGCTCCCCTCTACTCAGAACTTGTTCATCTTCTTGGGAAGCTTCAAGAGTCACTTGTCGTGGATGTCAAATGGCTCCTGCAAGGGCAAGATGCCCTTCTGGGACGCAAATCCACAAGGCAGCAGCTTGTTCATATTGCTCAAAGAAAGGGCCTCTCGACAAAGACTCAGGTTTGGAAACCATGGGGCTGGGCCAGCTTGCTTAGTGATGTAATAGCCAGTANAAGTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK061964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTGCCAGACCTGATGCTGCTCCCCTCTACTCAGAACTTGTTCATCTTCTTGGGAAGCTTCAAGAGTCACTTGTCGTGGATGTCAAATGGCTCCTGCAAGGGCAAGATGCCCTTCTGGGACGCAAATCCACAAGGCAGCAGCTTGTTCATATTGCTCAAAGAAAGGGCCTCTCGACAAAGACTCAGGTTTGGAAACCATGGGGCTGGGCCAGCTTGCTTAGTGATGTAATAGCCAGTAAAAGTACCAAGAGGAAATTGGAAGTCACTTCAATTGAGGAAGGAGAAGTTGTGGATGACTCTGCTGATGCTAAAAGGCCTAGCAAGGCTAACCCCCATAATGTGGACAGAAGCTTCGAGGGGATTAGATCTATTAATAAATATTTGACTGAGAAAGCCCTTTCAGAATTAATGTTGCCATGCATTGATAGAAGCTCTGCTGAATTTCGTAGTATATTTGCTGGTGATTTGGTGAAGCAGATGGGGACTATCAGTGAACACATCAAAGCAATAGCAAGGAATGGTACGAAACAATCTGGTTTAGTTCCATCAGGAACTGAAGCAGCATCGAACAAATCCAGTAGCCGTAAAGGGATTCGAGGTGGAAGTCCAAATATTGGACGGCGAGCTCCAGTTGGTAATGATCCAACTCCTCCTTCAGCATCTGCTCTGCGAGCAACAGTGTGGTTGCGCCTCCAATTTATCATTAGGTTGCTTCCATTAATCATGGCGGATAGGAGTATGAGACATACACTTGCTTCTGCAATTCTAGGCCTTCTTTCAGCACGCATAATTTATGAAGATGCAGATTTGCCCCTTCCTCCTACCAACACTACCGTTTTAAGGCGGGACGTGGATTCTTTGCTGGAACCTCCCTTAGATGTCCTTCTCGACCGCCCTGGTGAAAGTCTTTTTGAGAGGCTCATATGTGTTTTCCATGCATTACTTGGCAATGGCAAACCAAGTTGGCTGAAGTCAAAGTCAGTTTCTAAGTCGACCACTAGAACTCCAAGAGATTTCCCTGCATTTGATAGTGAAGCAGCTGAGGGCTTACAGTCTGTACTAGATCACCTGGAGATGCCTGGAATAATCAGGCGAAGAATCCAAGCAGCTATGCCAGTTCTCCCACCTTCTCGCCACCCTTGTATATCATGCCAACCACCTCAGTTGTCTTTGGCCGCATTATCACCACTCCAGAGCGGTACATCTACTTCAGGTCCTCAACAGAAAGGCAACTCTACTAGCTGGGTTCCTACTAATGTATCGATCAGAAACAAGGCGGCGTTTGCAACCCAAGATCCTGAGATGGAAGTAGATCCATGGACATTGCTTGAGGATGGCACAAGTTGCCCCTCCATGTCATCTGGAAGTAACAGTTCCAGTGGCATGGCTGGCGATCATGGTAATTTGAAAGCTTGTAGCTGGCTCAAGGGTGCAGTGAGAGTGAGGAGGACAGAACTAACCTATATTGGGTCCCTGGATGATGATAGCTGATCATGCTTGTACGCTATCACTGCTGACGTTGCACAAATTCAAGATGGGGATTGAGGAAAATTTTTCGGTTTTGGACCAGGTTGGGCTTGAGTGGTATACATGCCGCCACCATGATAAACTCCACTATTGAAGTGAGTTTTGTGTTGAAATTGTGGCCTTGTGGGGGCGGCCTTGATGTAGAATATCTTACACCCTGGGGTATTGTTGTTACTAGGGCCTGCGGGAGCGACCTTGTACATAATGTAACATTAATCCATTTGTCAAGCAAGCTGTCCCTGAAAGAAGTTGCCCCAGGGCCCTGTTTGTAGCTTATATTCAAAGTTAGGAAGATATGCATGCATGCAGTAGCTGATGAGTCGAAAGGAATGTATTGGTTTTTGTTTTGCTCGATATGTAACCTAGTGTGAGTTAGCCCCTGCTCAAAACCGAGGGTTGATATTATACAACATTATGTATATCATATGGTGGCT]


>consensus_3864#0 TGCACCTTTACCAGTCTCTGTCAAACGCAATAAATGACATCACCATGCATCAGCCTTTTC GGGATATCTGCTTCCGTAATACACATCAGCTGTATGATCTCCTGGCCGCTGATGTTGGTG ATTCAGAGTTTGCGGCAATGCTTGAAATGCATAACCCAGATAAGGGTTCAAAAGCAATGG CATTTATACCTCTTCGTGCTCGGCTATTTTTGAATTCCCTTGTTGATTGTAAAACAGCTG GGGCAATTCTAGGAGATGGTTCGTGTGCTTCAGAGTCTGGCGAGGCAAAAGAGAGTGAGT TGAAACTCTCTGACAGACTTATACAACTACTGGATACCCTCCAACCAGCAAAGTTCCATT GGCAATGGGTTGAGTTGAGGTTTCTTTTAGATGAACAAGCTCTTCTGGAAAAAGTTGCAG CTGGTAATACATCAGTCGCAGAAGCAATCCAGTCGCTTTCCCCTAATGCTGAAAGCTTTG CCCTTTCTGATAGTGAGAAAGGGTTCACTGAAATCATCCTGTCAAGATTACTTGCCAGAC CTGATGCTGCTCCCCTCTACTCAGAACTTGTTCATCTTCTTGGGAAGCTTCAAGAGTCAC TTGTCGTGGATGTCAAATGGCTCCTGCAAGGGCAAGATGCCCTTCTGGGACGCAAATCCA CAAGGCAGCAGCTTGTTCATATTGCTCAAAGAAAGGGCCTCTCGACAAAGACTCAGGTTT GGAAACCATGGGGCTGGGCCAGCTTGCTTAGTGATGTAATAGCCAGTANAAGTACCAAGA GGAAATTGGAAGTCACTTCAATTGAGGAAGGAGAAGTTGTGGATGACTCTGCTGATGCTA AAAGGCCTAGCAAGGCTAACCCCCATAATGTGGACAGAAGCTTCGAGGGGATTAGATCTA TTAATAAATATTTGACTGAGAAAGCCCTTTCAGAATTAATGTTGCCATGCATTGATAGAA GCTCTGCTGAATTTCGTAGTATATTTGCTGGTGATTTGGTGAAGCAGATGGGGACTATCA GTGAACACATCAAAGCAATAGCAAGGAATGGTACGAAACAATCTGGTTTAGTTCCATCAG GAACTGAAGCAGCATCGAACAAATCCAGTAGCCGTAAAGGGATTCGAGGTGGAAGTCCAA ATATTGGACGGCGAGCTCCAGTTGGTAATGATCCAACTCCTCCTTCAGCATCTGCTCTGC GAGCAACAGTGTGGTTGCGCCTCCAATTTATCATTAGGTTGCTTCCATTAATCATGGCGG ATAGGAGTATGAGACATACACTTGCTTCTGCAATTCTAGGCCTTCTTTCAGCACGCATAA TTTATGAAGATGCAGATTTGCCCCTTCCTCCTACCAACACTACCGTTTTAAGGCGGGACG TGGATTCTTTGCTGGAACCTCCCTTAGATGTCCTTCTCGACCGCCCTGGTGAAAGTCTTT TTGAGAGGCTCATATGTGTTTTCCATGCATTACTTGGCAATGGCAAACCAAGTTGGCTGA AGTCAAAGTCAGTTTCTAAGTCGACCACTAGAACTCCAAGAGATTTCCCTGCATTTGATA GTGAAGCAGCTGAGGGCTTACAGTCTGTACTAGATCACCTGGAGATGCCTGGAATAATCA GGCGAAGAATCCAAGCAGCTATGCCAGTTCTCCCACCTTCTCGCCACCCTTGTATATCAT GCCAACCACCTCAGTTGTCTTTGGCCGCATTATCACCACTCCAGAGCGGTACATCTACTT CAGGTCCTCAACAGAAAGGCAACTCTACTAGCTGGGTTCCTACTAATGTATCGATCAGAA ACAAGGCGGCGTTTGCAACCCAAGATCCTGAGATGGAAGTAGATCCATGGACATTGCTTG AGGATGGCACAAGTTGCCCCTCCATGTCATCTGGAAGTAACAGTTCCAGTGGCATGGCTG GCGATCATGGTAATTTGAAAGCTTGTAGCTGGCTCAAGGGTGCAGTGAGAGTGAGGAGGA CAGAACTAACCTATATTGGGTCCCTGGATGATGATAGCTGATCATGCTTGTACGCTATCA CTGCTGACGTTGCACAAATTCAAGATGGGGATTGAGGAAAATTTTTCGGTTTTGGACCAG GTTGGGCTTGAGTGGTATACATGCCGCCACCATGATAAACTCCACTATTGAAGTGAGTTT TGTGTTGAAATTGTGGCCTTGTGGGGGCGGCCTTGATGTAGAATATCTTACACCCTGGGG TATTGTTGTTACTAGGGCCTGCGGGAGCGACCTTGTACATAATGTAACATTAATCCATTT GTCAAGCAAGCTGTCCCTGAAAGAAGTTGCCCCAGGGCCCTGTTTGTAGCTTATATTCAA AGTTAGGAAGATATGCATGCATGCAGTAGCTGATGAGTCGAAAGGAATGTATTGGTTTTT GTTTTGCTCGATATGTAACCTAGTGTGAGTTAGCCCCTGCTCAAAACCGAGGGTTGATAT TATACAACATTATGTATATCATATGGTGGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)