cluster # 3884

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Oryza sativa
cluster # 3884 cluster # 3884 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3884#0 length = 1200 sequences # 2
consensusID : consensus_3884#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1200
fasta sequence
                              [TAATTCTTTCCCGATAGCATATCAGTATGAAGAGTGCCCTGGTAATCCTGCTGACGACGACGGCGCTTGCTACCGGCGTCCTCGCAGCGTATAATGACCCGCTCCAGCCAGACCACCTCCTACCTTCGCATGGCATGCCAGGTGTGCCATACATGCCAGGTGTGCCATACACGAGGTCTAGTAATGGTGATCCTTCCATTCGAGCTTCTTCCCCGTACCATCGTCCGTCACCTCCTTGTTCCCATTTGCCATGTCCTTGAAGTGATGCGGAGATACGCGATGGAGCAAAAACCCCACCAGCGAAAACTATAACCGGGAAGGAGTTGGGCGTCCACTTGCGAAGATCGGTTATCGCAAGCGGCGCCTGCGATAATCATATTCACATACGGCCTCCTCCCGCAATAATCTCAGGAGAGTGTCGCCGCCTGCGAAGATTGGTTTGGGCAGGCGCCCGTTATGTGTTCCGCCTGCGAAAATAGCGCTGGATAGTCATCTTCCTCCCCAAGCTCTATTCATTCTATCCGGTGTTTCTCTCTCCTAAAGCTCAGAGAAGATGACCCCAAGAAGGCTGCTGAACTAGCCAGAAAAAAATACTTTCCAATTGATGGCTGCCAGGAAAAATACCAACATGGGAAAGCAATATGGCTGGATTTTGCACTTGATGACGGTCCATGGGAGATGACAAGGTTATATAAATGGTACATGGATGCCAGCAAGAAAGGCCTAAGTCATATAACAATTCGATCACCGCATGATGCTTTCGCCGGCGACGGTTACTTCTGGCTAGATTTTGAAGATCTCCACGCCATATATCGTCAGGAAAAGATTGACGTCAACTATATCGGTGCTTAGTGCATGAATGCATGGATGCTAAGAAGGAAAAAGAACCTATCGGATTCTTGTATCCAACTAGGATCTGTCAAACACAGCATGCCGTGAGGCTATCACCAAGGTCGGAGCAGTTGAAAGACAAGACTCCCGAATAGATAGCTGAATATAAGAAGGGCTTGCACAAGCAGAAAATAATTACTGTTGCACAGTATATTGGACGAGCCTTCTTGCACTTTCAAAATAAGAAAGTCGTCCTAGCCGTTTATAATTTTAAGTCTGGTAAATTTATCTTCTACATATGTGTCTTGTTTTATCCGTGACTAAAGGCACTGTCATTAATATATAGCGATCATTACATCAAATAAAGGA]

[+] EMBL CB635457             [TAATTCTTTCCCGATAGCATATCAGTATGAAGAGTGCCCTGGTAATCCTGCTGACGACGACGGCGCTTGCTACCGGCGTCCTCGCAGCGTATAATGACCCGCTCCAGCCAGACCACCTCCTACCTTCGCATGGCATGCCAGGTGTGCCATACATGCCAGGTGTGCCATACACGAGGTCTAGTAATGGTGATCCTTCCATTCGAGCTTCTTCCCCGTACCATCGTCCGTCACCTCCTTGTTCCCATTTGCCATGTCCTTGAAGTGATGCGGAGATACGCGATGGAGCAAAAACCCCACCAGCGAAAACTATAACCGGGAAGGAGTTGGGCGTCCACTTGCGAAGATCGGTTATCGCAAGCGGCGCCTGCGATAATCATATTCACATACGGCCTCCTCCCGCAATAATCTCAGGAGAGTGTCGCCGCCTGCGAAGATTGGTTTGGGCAGGCGCCCGTTATGTGTTCCGCCTGCGAAAATAGCGCTGGATAGTCATCTTCCTCCCCAAGCTCTATTCATTCTATCCGGTGTTTCTCTCTCCTAAAGCTCAGAGAAGATGACCCCAAGAAGGCTGCTGAACTAGCCAGAAAAAAATACTTTCCAATTGATGGCTGCCAGGAAAAATACCAACATGGGAAAGCAATATGGCTGGATTTTGCACTTGATGACGGTCCATGGGAGATGACAAGGTTATATAAATGGTACATGGATGCCAGCAAGAAAGGCCTAAGTCATATAACAATTCGATCACCGCATGATGCTTTCGCCGGCGACGGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB635458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCCTGCGAAAATAGCGCTGGATAGTCATCTTCCTCCCCAAGCTCTATTCATTCTATCCGGTGTTTCTCTCTCCTAAAGCTCAGAGAAGATGACCCCAAGAAGGCTGCTGAACTAGCCAGAAAAAAATACTTTCCAATTGATGGCTGCCAGGAAAAATACCAACATGGGAAAGCAATATGGCTGGATTTTGCACTTGATGACGGTCCATGGGAGATGACAAGGTTATATAAATGGTACATGGATGCCAGCAAGAAAGGCCTAAGTCATATAACAATTCGATCACCGCATGATGCTTTCGCCGGCGACGGTTACTTCTGGCTAGATTTTGAAGATCTCCACGCCATATATCGTCAGGAAAAGATTGACGTCAACTATATCGGTGCTTAGTGCATGAATGCATGGATGCTAAGAAGGAAAAAGAACCTATCGGATTCTTGTATCCAACTAGGATCTGTCAAACACAGCATGCCGTGAGGCTATCACCAAGGTCGGAGCAGTTGAAAGACAAGACTCCCGAATAGATAGCTGAATATAAGAAGGGCTTGCACAAGCAGAAAATAATTACTGTTGCACAGTATATTGGACGAGCCTTCTTGCACTTTCAAAATAAGAAAGTCGTCCTAGCCGTTTATAATTTTAAGTCTGGTAAATTTATCTTCTACATATGTGTCTTGTTTTATCCGTGACTAAAGGCACTGTCATTAATATATAGCGATCATTACATCAAATAAAGGA]




>consensus_3884#0
TAATTCTTTCCCGATAGCATATCAGTATGAAGAGTGCCCTGGTAATCCTGCTGACGACGA
CGGCGCTTGCTACCGGCGTCCTCGCAGCGTATAATGACCCGCTCCAGCCAGACCACCTCC
TACCTTCGCATGGCATGCCAGGTGTGCCATACATGCCAGGTGTGCCATACACGAGGTCTA
GTAATGGTGATCCTTCCATTCGAGCTTCTTCCCCGTACCATCGTCCGTCACCTCCTTGTT
CCCATTTGCCATGTCCTTGAAGTGATGCGGAGATACGCGATGGAGCAAAAACCCCACCAG
CGAAAACTATAACCGGGAAGGAGTTGGGCGTCCACTTGCGAAGATCGGTTATCGCAAGCG
GCGCCTGCGATAATCATATTCACATACGGCCTCCTCCCGCAATAATCTCAGGAGAGTGTC
GCCGCCTGCGAAGATTGGTTTGGGCAGGCGCCCGTTATGTGTTCCGCCTGCGAAAATAGC
GCTGGATAGTCATCTTCCTCCCCAAGCTCTATTCATTCTATCCGGTGTTTCTCTCTCCTA
AAGCTCAGAGAAGATGACCCCAAGAAGGCTGCTGAACTAGCCAGAAAAAAATACTTTCCA
ATTGATGGCTGCCAGGAAAAATACCAACATGGGAAAGCAATATGGCTGGATTTTGCACTT
GATGACGGTCCATGGGAGATGACAAGGTTATATAAATGGTACATGGATGCCAGCAAGAAA
GGCCTAAGTCATATAACAATTCGATCACCGCATGATGCTTTCGCCGGCGACGGTTACTTC
TGGCTAGATTTTGAAGATCTCCACGCCATATATCGTCAGGAAAAGATTGACGTCAACTAT
ATCGGTGCTTAGTGCATGAATGCATGGATGCTAAGAAGGAAAAAGAACCTATCGGATTCT
TGTATCCAACTAGGATCTGTCAAACACAGCATGCCGTGAGGCTATCACCAAGGTCGGAGC
AGTTGAAAGACAAGACTCCCGAATAGATAGCTGAATATAAGAAGGGCTTGCACAAGCAGA
AAATAATTACTGTTGCACAGTATATTGGACGAGCCTTCTTGCACTTTCAAAATAAGAAAG
TCGTCCTAGCCGTTTATAATTTTAAGTCTGGTAAATTTATCTTCTACATATGTGTCTTGT
TTTATCCGTGACTAAAGGCACTGTCATTAATATATAGCGATCATTACATCAAATAAAGGA
clustalw multiple alignements is not computed in this case