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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3890 cluster # 3890       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3890#0 length = 558 sequences # 3  

consensusID : consensus_3890#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 558
fasta sequence
                              [CCAAAACGCCTCCCCTTCCCGGCCCTCTCCGAGGCGACCTCCCCCTCCCCTCTCCTTAGATCCCTCCTCCCCTTACCGGCCCTCTCCGTCAGCCGGCGGTGGCTGGCGAAGCCGCGTCAGTGGCGTCGGGCGGAGGCAGGCAGCGGCAGACGGCGGGCGCAGCCGCGTCGGCAGCGTCGGGCGAAGGCAGGCAGCAGTTGGGGGCTAGTGACGTCGTCGGAGCCGCGTCGACGGAGCCGCATCGGTGGGAGGAGGCAGGCCACGGGCGTCTATGGCGGTTGGTGGCGGGCGGAGCCACCTCGGCGGCGGCGGGCGGAGGCGCGTCGGCGGGAGGAGGCAGGCCGCGTCAGCGGCGGCTGGCGGAGGCGGAGCCTCGTCGGCGGCGGCGGGCGGAGGCGCGGCTGGCGGGAGGAGGCAGGCCGCGGGAGTCGGCGGTGGCGGGCACGATTCGGTGGTGGGTGGTGGCGATTTGATTTGTGAGGTTTTTGTGAATGTGTTGTGATGTAACATTTGATCTGTAAATTTTTTATTTCAATATGATCTGTGAATTTTTGATGT]

[+] EMBL AA752947             [CCAAAACGCCTCCCCTTCCCGGCCCTCTCCGAGGCGACCT CCCCTCCCCTCTCCTTAGATCCCTCCTCCCCTTACCGGCCCTCTCCGTCAGCCGGCGGTGGCTGGCGAAGCCGCGTCAGTGGCGTCGGGCGGAGGCAGGCAGCGGCAGACGGCGGGCGCAGCCGCGTCGGCAGCGTCGGGCGAAGGCAGGCAGCAGTTGGGGGCTAGTGACGTCGTCGGAGCCGCGTCGACGGAGCCGCATCGGTGGGAGGAGGCAGGCCACTGGCGTCTATGGCGGTTGGTGGCGGGCGGANCCACCTCCGCGGCGGCGGGCGGANGCGCGTCNGCGGGAGGA GCANGCCGCGTCAGCGGCGGCTGGCGGAGGCGGA CCTC TC GCGGCGGCGGGCGGA GCGCGGCTGGCGGGAGGA GCANGCCGCGGGAGTC GCGGTGGCGGGCACNATTCGGTGGTGGGTGGTGGCGATTTGATTTGTGAG  TTTTGTGAATGTG TGTGATGT ACA TTGATCTGTAAt                                    ]
[+] EMBL CB664285             [           CCCCTTCCCGGCCCTCTCCGAGGCGACCTCCCCCTCCCCTCTCCTTAGATCCCTCCTCCCCTTACCGGCCCTCTCCGTCAGCCGGCGGTGGCTGGCGAAGCCGCGTCAGTGGCGTCGGGCGGAGGCAGGCAGCGGCAGACGGCGGGCGCAGCCGCGTCGGCAGCGTCGGGCGAAGGCAGGCAGCAGTTGGGGGCTAGTGACGTCGTCGGAGCCGCGTCGACGGAGCCGCATCGGTGGGAGGAGGCAGGCCACGGGCGTCTATGGCGGTTGGTGGCGGGCGGAGCCACGTCGGCGGCGGCGGGCGGAGGCGCGTCGGCGGGAGGAGGCAGGCCGCGTCAGCGGCGGCTGGCGGAGGCGGAGCCTCGTCGGCGGCGGCGGGCGGAGGCGCGGCTGGCGGGAGGAGGCAGGCCGCGGGAGTCGGCGGTGGCGGGCACGATTCGGTGGTGGGTGGTGGCGATTTGATTTGTGAGGTTTTTGTGAATGTGTTGTGATGTAACATTTGATCTGTAAATTTTTTATTTCAATATGATCTGTGAATTTTTGATGT]
[-] EMBL CB664286             [                          tTCGGAGGNGACCTCCCCCTCCCCTCTCCTTAGATCCCTCCTCCCCTTACCGGCCCTTTCCGTCAGCCGGCGGTGGCTGGCGAAGCCGCGTCAGTGGCGTCGGGCGGAGGCAGGCAGCGGCAGACGGCGGGCGCAGCCGCGTCGGCAGCGTCGGGCGAAGGCAGGCAGCAGTTGGGGGCTAGTGACGTCGTCGGAGCCGCGTCGACGGAGCCGCATCGGTGGGAGGAGGCAGGCCACGGGCGTTTATGGCGGTTGGTGGCGGGCGGAGCCACTTCGGCGGCGGCGGGCGGAGGCGCGTCGGCGGGAGGAGGCAGGCCGCGTCAGCGGCGGCTGGCGGAGGCGGACCCTCGTCGGCGGCGGCGGGCGGAGGCGCGGCTGGCGGGAGGAGGCAGCCCGCGGGAGTCGGCGGTGGCGGGCACGATTCGGTGGTGGGTGGTGGCGATTTGATTTGTGAGGTTTTTGTGAATGTGTTGTGATGTAACATTTGATCTGTAAATTTTTTATTTCAATATGATCTGTGAATT        ]


>consensus_3890#0 CCAAAACGCCTCCCCTTCCCGGCCCTCTCCGAGGCGACCTCCCCCTCCCCTCTCCTTAGA TCCCTCCTCCCCTTACCGGCCCTCTCCGTCAGCCGGCGGTGGCTGGCGAAGCCGCGTCAG TGGCGTCGGGCGGAGGCAGGCAGCGGCAGACGGCGGGCGCAGCCGCGTCGGCAGCGTCGG GCGAAGGCAGGCAGCAGTTGGGGGCTAGTGACGTCGTCGGAGCCGCGTCGACGGAGCCGC ATCGGTGGGAGGAGGCAGGCCACGGGCGTCTATGGCGGTTGGTGGCGGGCGGAGCCACCT CGGCGGCGGCGGGCGGAGGCGCGTCGGCGGGAGGAGGCAGGCCGCGTCAGCGGCGGCTGG CGGAGGCGGAGCCTCGTCGGCGGCGGCGGGCGGAGGCGCGGCTGGCGGGAGGAGGCAGGC CGCGGGAGTCGGCGGTGGCGGGCACGATTCGGTGGTGGGTGGTGGCGATTTGATTTGTGA GGTTTTTGTGAATGTGTTGTGATGTAACATTTGATCTGTAAATTTTTTATTTCAATATGA TCTGTGAATTTTTGATGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)