These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3900#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2845 fasta sequence [TCTCATGTCCACCGCCGCGGACTCCTCCTCCCTCTCCGGCGACTCCTCCCCGGCCTCCTCCGGCGACGCCGAATCCTCCTCCTCCCCGTCCTCCTCCGCCGCCGCCGCTGGGGGCTCCGACGACCCCGCCCCCGTCGACCAAGTCGTCGCCTCGGGCTCCGGTGCAGGCGGCGATGGCGACGCCGCCGCAGCCGTCCCAACCTCGCCGCGCATTGGCATGTACTTCGAGACGGAGGAGGACGCGTACGAGTTCTACAAGGCGTACGCCGCCAGGCTCGGCTTCGTCGTCCGCAAGTCCAACAAGTCCAAGAACTCGCGCCACACCGTCACCCGCCGCCTCTTCGTCTGCTCCAAGCAGGGATTCCGCCAAGAACCCAAGAAGCCGCCTCAGGACGAGGCCGCCGCGGCGTCGCCCCCGCCTCCGCGGTGCCCGGACTCGCGCACTGGGTGCCTGGCGTCGCTCACCATCAAGCTCCTCCCGTCGGCCAACGCGTTCCGAGTCACCGACTTTGCCACCGAGCACAACCACCCGCTCGCCTCCGCCGCGCCCGCCGTGTCGCTGGCATTGCTGCCGCCGAGCTCGTCCCACCACACCATCGCTGCCGTGGCGAGCCTGCCGGACCCGAGGGATGGGCCACGCACCGATATGCACTTTGAGACGGAGGACGACGCGTATGCTTTCTACAACCGGTACGCTGAGCATGTGGGCTTCAGTGTCCGCCGCTCGTACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTG-TTTGTTCCCGCGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAGCACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGCAAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGAGCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAGGGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGTGCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCCTTCAGTGTATTATGCGGTAGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTGGGCTGATGCAGAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATACAACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACCACCACAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAAATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGATTGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTGCACAAGTGTGTGGCATATCTACCATAACTCAAAGAGGCACTTGAAGCAGGTATTTGAAGGCTCAAAGAGTTTTGCCAATGCTTTAAGCCATTGTCTCTTTGAATGTGATGATGAGGTGGAATTCTTGTCAGCATGGGAAAAACTAATTGAGAAGCATGATGTAGGTGAGAATGAGTGGCTCAACAAACTTTTTCTGGAGAAAGAAAAATGGGCTTTGCCTTATTGGAGAGCCTTGTTTTCTGCTGATATCCTCACCACTCTTAGGAAGGATAATATGATTAATGATATTAAACGGGAGCTCAGTGAGCAAGAAGATATTCTGCAGTTCTTAAGGCGCTATGAGACCATGCTTGAGGCGCATCGGTCAAAGAAATTGCAGGCTGATGTTGATGGAAGCCAGGTGACATTGCCAATCCCATCCTTGCGAATGTTAAAGCAAGCTTCAAGTGCATACACGCCCGAAGCTTTCAAGATGTTCCAGGGTGAGTTTGAGGCTTACATGAATTGCATGTCCTTCCCATGTGGTGGACTTGGCACAATCTCGGAGTATAAAATAACACTTGATGAGAAGCCATCAGAGAGCATTGTGAAATTTGATGCACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTGTCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTTGAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATCTAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTTGATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAGTGTTCTTCTGAAGCATCTAGATGATATTTTACAAACGGGTTATCCTGATATAGGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACAGAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGTGTTAGTCAAATGCAGGAGTATGGCTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATTATACTTTGGTAGCTGTTCTGCTAAATATAACCAATCCTGATGTCTCT] [+] EMBL AK119387 [TCTCATGTCCACCGCCGCGGACTCCTCCTCCCTCTCCGGCGACTCCTCCCCGGCCTCCTCCGGCGACGCCGAATCCTCCTCCTCCCCGTCCTCCTCCGCCGCCGCCGCTGGGGGCTCCGACGACCCCGCCCCCGTCGACCAAGTCGTCGCCTCGGGCTCCGGTGCAGGCGGCGATGGCGACGCCGCCGCAGCCGTCCCAACCTCGCCGCGCATTGGCATGTACTTCGAGACGGAGGAGGACGCGTACGAGTTCTACAAGGCGTACGCCGCCAGGCTCGGCTTCGTCGTCCGCAAGTCCAACAAGTCCAAGAACTCGCGCCACACCGTCACCCGCCGCCTCTTCGTCTGCTCCAAGCAGGGATTCCGCCAAGAACCCAAGAAGCCGCCTCAGGACGAGGCCGCCGCGGCGTCGCCCCCGCCTCCGCGGTGCCCGGACTCGCGCACTGGGTGCCTGGCGTCGCTCACCATCAAGCTCCTCCCGTCGGCCAACGCGTTCCGAGTCACCGACTTTGCCACCGAGCACAACCACCCGCTCGCCTCCGCCGCGCCCGCCGTGTCGCTGGCATTGCTGCCGCCGAGCTCGTCCCACCACACCATCGCTGCCGTGGCGAGCCTGCCGGACCCGAGGGATGGGCCACGCACCGATATGCACTTTGAGACGGAGGACGACGCGTATGCTTTCTACAACCGGTACGCTGAGCATGTGGGCTTCAGTGTCCGCCGCTCGTACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTG TTTGTTCCCGCGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAGCACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGCAAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGAGCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAGGGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGTGCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCCTTCAGTGTATTATGCGGTAGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTGGGCTGATGCAGAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATACAACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACCACCACAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAAATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGATTGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTGCACAAGTGTGTGGCATATCTACCATAACTCAAAGAGGCACTTGAAGCAGGTATTTGAAGGCTCAAAGAGTTTTGCCAATGCTTTAAGCCATTGTCTCTTTGAATGTGATGATGAGGTGGAATTCTTGTCAGCATGGGAAAAACTAATTGAGAAGCATGATGTAGGTGAGAATGAGTGGCTCAACAAACTTTTTCTGGAGAAAGAAAAATGGGCTTTGCCTTATTGGAGAGCCTTGTTTTCTGCTGATATCCTCACCACTCTTAGGAAGGATAATATGATTAATGATATTAAACGGGAGCTCAGTGAGCAAGAAGATATTCTGCAGTTCTTAAGGCGCTATGAGACCATGCTTGAGGCGCATCGGTCAAAGAAATTGCAGGCTGATGTTGATGGAAGCCAGGTGACATTGCCAATCCCATCCTTGCGAATGTTAAAGCAAGCTTCAAGTGCATACACGCCCGAAGCTTTCAAGATGTTCCAGGGTGAGTTTGAGGCTTACATGAATTGCATGTCCTTCCCATGTGGTGGACTTGGCACAATCTCGGAGTATAAAATAACACTTGATGAGAAGCCATCAGAGAGCATTGTGAAATTTGATGCACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTGTCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTTGAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATCTAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTTGATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAGTGTTCTTCTGAAGCATCTAGATGATATTTTACAAACGGGTTATCCTGATATAGGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACAGAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGTGTTAGTCAAATGCAGGAGTATGGCTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATTATACTTTGGTAGCTGTTCTGCTAAATATAACCAATCCTGATGTCTCT] [+] EMBL CB634256 [ TACAAGAAGCGAAAGCGTGGGGTGATCGTGTCCCGGATCTTTGAGAGGTTCCCGCGAGGGAGTTAGTGACCGTGCCAAGCACGAGAGTATTGCCATTGTCAGCAACAATGCTAGCACAGGGCCATCAGGCACACCTAGACCAGGCCCTCCACCGACGCGGACAGGGTGCCAGGCAAGAATGGTAATCAAGATCACCCCATGCCGGACGTACCGGGTGGCAAAGTTTGTTCCGGAGCATAATCATCCACTTGCCAATCCAGATAGTGTGCACAAGCTGCGGTCGCACAAAATGAGGGCTCGAGCTCATGAGCTTGGGGCAGGGGAACTGCATCGCAGAAAGCATGGGAAAGGTGTGCAACTTGGGGATGCTGGAGCAGTGCTGGAATACTTGGAAGAGCTGCAGGTAGGGAACCCTTCAGTGTATTATGCGGTTGGAGTGGGGCCTGATGGAAAATCAGCTGCAAATTTCTTCTGGGCTGATGCAAAGTCAATGATCGACTATAGGAGCTTTGGTGATGTTGTTTGCTTTGATACAACATATGAGTTAAATGGGTATGGAAGGCCATTTGCATTGTTTGTTGGTGTGGACAACCACAAACAGATGCTTGTGTTTGGTGCTGCTCTGCTTTATGATGAGAGCATTGAATCATTGAAATGGGTATTCAAGGCGTTTGCTGATGCAATGTGTGGTAAGCAGCCAGACACTGTTTTGATTGATGAGCGTCCTGAGTGTGCTATGGCAGCAGCAGAGGTTTGGCCAAGAAGTAGCCATTGCACAAGTGTGTGGCATATC ] [-] EMBL CB634257 [ GAAATTTGATGCACTAGATGGATCAGCTACGTGCAGCTGTAGGAAGTTTGAATCTGTTGGAATTCAGTGCTGTCATGTACTAAAGGTACTTGATCTCAAGAATATAAAGGAACTCCCAGAACAATACATTTTGAGGAGATGGAGAAAAGACGCTCGTTCTGTCAGAATAGGGGAAGAACCTTCTGGTGGATCTAGCAGTATGCGTTCAGCCTCAGAAGTCCGCTTCAGTACTATGTGCCGTTTTCTTAGCTTGATAGCTTCAAGGGCTGCCAGATCTGAGGAGGCAACGTCTTATATCGAAAGTCAATCAAGTGTTCTTCTGAAGCATCTAGATGATATTTTACAAACAGGTTATCCTGATATAGGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACGCAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGCGTTAGTCAAATGCAGGAGTATGGTTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATGGTACTTTGGTAGCTGTTCTGCTAAATATAACCAAaatataga ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||