These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3903#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3111 fasta sequence [TCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGATCTCTCCTCCTCCTCCTCCTCCATCCGCGCCTCCACATCTCCACACGCAACACACGGAGACGAATTTTTCTCCTGGTCCCTTCTCGCCTCGCCTCGCCTCGCCTCTCGATCCGATCGGGATACTATGGCCGCGTCGTCGTCGTCGTCGGCGTCGGCGTCGGCGATGGGCGGCGGGGGGATGCGGAAGGCGCCGTCGATGGAGTGGCGGTGGGTATCCACGGAGGAGGACGACGAGGGGGAGGAGGACGGGGACACGGTGGAGGCGGCGGCCGCGGCCGTCGGGGCCGTGGGCAGGGGCGGGAGCTTCGGGTCCGAGGAGGAGGAGGACGAGGAGGACGGCGGCGGCGGCGGCGAGGGGGAGGGGGAGGGCGAGGATGGGGAGAAGCAGAAGCTGATCCGCACCGTGCCGTCCGTCGACTGGTTCGACGTCGAGGGCTACGAGGTCTCCGTCGCGCAGCACATCGAGGACAGCGAGGAGTTTGATTTTGGCAGGACAATGTTTCTTGCCCTTCAGACTCTTGCTGTGGTGTTTGGAGATATTGGAATAAGTCCATTGTATACATTTGATGTCATGTTCAGCAAGTATCCCATTCTTGGAGAGGAGGATGTTCTTGGAGCACTGTCACTTGTCCTTTATACTCTAATTTCGATGCCACTAGTGAAGTATGTCTTAGTCGTCCTTTGGGCTAATGATGATGGTGAAGGTGGTATATTTGCGTTGTACTCTTTGATTTGCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGGATGTCGAGTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGATCCATAAAAGTAAAGGAGAAGCTTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGGACTGCAATGTTCGTATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTCAGTGGCTTGAAAGTTGGGATACCAAATGCCTCACAAGGCCTTGTGGTGATGATTTCAGTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGGGGTTTGCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATATACAATCTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTTATTATTTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTGCAACAGGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGTCAATGTTTGCGCTTCTTGTTCTTCCTTGCCTTGTCTTGGCCAATTTAGGACAAGGCGCTTTTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCATATGCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGGAATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAACGTGTTTGTACAAGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGATAAGAACCAGGAGAGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTCATACAGCGGGAGGCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAGGAGCCTCCAACCCCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGACGTCCCTCTCCTGGCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCAACGCCTCAGCACGATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTCATCAGGCAGGCCAAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCCAGGAAGAATTCCTGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGGAACAACTGCCGCAGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTGCGCTTGACCTCTTATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGTTCGTTGCTATCAAGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAAGAGTATAGTTGCACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCACGTCTCCTGTAATTTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAACACATCAGAGTGTGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCCATGTACTAGACAAGGTACTCGTTTTGAGTTTTTGAGTAAAAATTTTGATATCTACAAG] [+] EMBL AK100672 [TCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGATCTCTCCTCCTCCTCCTCCTCCATCCGCGCCTCCACATCTCCACACGCAACACACGGAGACGAATTTTTCTCCTGGTCCCTTCTCGCCTCGCCTCGCCTCGCCTCTCGATCCGATCGGGATACTATGGCCGCGTCGTCGTCGTCGTCGGCGTCGGCGTCGGCGATGGGCGGCGGGGGGATGCGGAAGGCGCCGTCGATGGAGTGGCGGTGGGTATCCACGGAGGAGGACGACGAGGGGGAGGAGGACGGGGACACGGTGGAGGCGGCGGCCGCGGCCGTCGGGGCCGTGGGCAGGGGCGGGAGCTTCGGGTCCGAGGAGGAGGAGGACGAGGAGGACGGCGGCGGCGGCGGCGAGGGGGAGGGGGAGGGCGAGGATGGGGAGAAGCAGAAGCTGATCCGCACCGTGCCGTCCGTCGACTGGTTCGACGTCGAGGGCTACGAGGTCTCCGTCGCGCAGCACATCGAGGACAGCGAGGAGTTTGATTTTGGCAGGACAATGTTTCTTGCCCTTCAGACTCTTGCTGTGGTGTTTGGAGATATTGGAATAAGTCCATTGTATACATTTGATGTCATGTTCAGCAAGTATCCCATTCTTGGAGAGGAGGATGTTCTTGGAGCACTGTCACTTGTCCTTTATACTCTAATTTCGATGCCACTAGTGAAGTATGTCTTAGTCGTCCTTTGGGCTAATGATGATGGTGAAGGTGGTATATTTGCGTTGTACTCTTTGATTTGCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGGATGTCGAGTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGATCCATAAAAGTAAAGGAGAAGCTTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGGACTGCAATGTTCGTATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTCAGTGGCTTGAAAGTTGGGATACCAAATGCCTCACAAGGCCTTGTGGTGATGATTTCAGTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGGGGTTTGCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATATACAATCTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTTATTATTTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTGCAACAGGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGTCAATGTTTGCGCTTCTTGTTCTTCCTTGCCTTGTCTTGGCCAATTTAGGACAAGGCGCTTTTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCATATGCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGGAATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAACGTGTTTGTACAAGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGATAAGAACCAGGAGAGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTCATACAGCGGGAGGCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAGGAGCCTCCAACCCCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGACGTCCCTCTCCTGGCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCAACGCCTCAGCACGATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTCATCAGGCAGGCCAAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCCAGGAAGAATTCCTGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGGAACAACTGCCGCAGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTGCGCTTGACCTCTTATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGTTCGTTGCTATCAAGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAAGAGTATAGTTGCACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCACGTCTCCTGTAATTTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAACACATCAGAGTGTGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCCATGTACTAGACAAGGTACTCGTTTTGAGTTTTTGAGTAAAAATTTTGATATCTACAAG] [+] EMBL CB667740 [ TGTTCTTCCTTGCCTTGTCTTGGCCTATTTAGGACAAGGCGCTTTTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCATATGCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGGAATG ] consensusID : consensus_3903#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2865 fasta sequence [GACTAAGTTAGAACATTAACATCTTTCAGTGATTCCATGACTCTACAGGTGGTATATTTGCGTTGTACTCTTTGATTTGCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGGATGTCGAGTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGACCCATAAAAGTAAAGGAGAAGCTTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGGACTGCAATGTTCATATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTCAGTGGCTTGAAAGTTGGGATACCAAATGCCTCACAAGGTGATCCTTTAGATCCCTGTATCTGATAGCACCTAAGCAAACTATTTATTTAACTCCACTAAATGTTATTTGCAGGCCTTGTGGTGATGATTTCAGTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGGGGTTTGCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATATACAATCTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTTATTATTTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTGCAACAGGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGTCAATGTTTGCGCTTCTTGTTCCTCCTTGCCTTGTCTTGGCCTATTTAGGACAAGGCGCTTTTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCATATGGTAATCCTATATACTTGTATAGTTCATCCCCACTAAGTGTAGTTAATGTTATCTCTCTTCTATCATTAAGCCACATCACCTTAATTATTTCTAGCCATTGGATGATAGATCTATGGTTCAAATTGTCTCTTCTTTCTTCCCTCATAACACCAAGTAATCTCAATTTTTTAGGCCTCAAAATTCATAAGTATCAATTTGTTTTAGTTTTAATATTCGTATTTAATCTTATTTGTGCATATTATGCAACTTAATTTCCCTCAGCAATGTGGCAGGGTATTCATCTAGTAATAACTTAATATATGGTTATACTTTTTAGTGCAAATCTGTCTATTTATCTGCTTTTTAATAAGTTGTAATGCTCAGTGTTCTACATGCGCTTACCCTGTTCCATATTGAACAGCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGGAATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAACGTGTTTGTACAAGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGATAAGAACCAGGAGAGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTCATACAGCGGGAGGCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAGGAGCCTCCAACCCCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGACGTCCCTCTCCTGGCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCAACGCCTCAGCACGATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTCATCAGGCAGGCCAAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCCAGGAAGAATTCCTGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGGAACAACTGCCGCAGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTGCGCTTGACCTCTTATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGTTCGTTGCTATCAAGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAAGAGTATAGTTGCACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCACGTCTCCTGTAATTTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAACACATCAGAGTGTGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCCATGTACTAGACAAGGTACTCGTTTTGAGTTTTTGAGTAA] [+] EMBL AK060729 [GACTAAGTTAGAACATTAACATCTTTCAGTGATTCCATGACTCTACAGGTGGTATATTTGCGTTGTACTCTTTGATTTGCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGGATGTCGAGTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGACCCATAAAAGTAAAGGAGAAGCTTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGGACTGCAATGTTCATATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTCAGTGGCTTGAAAGTTGGGATACCAAATGCCTCACAAGGTGATCCTTTAGATCCCTGTATCTGATAGCACCTAAGCAAACTATTTATTTAACTCCACTAAATGTTATTTGCAGGCCTTGTGGTGATGATTTCAGTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGGGGTTTGCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATATACAATCTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTTATTATTTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTGCAACAGGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGTCAATGTTTGCGCTTCTTGTTCCTCCTTGCCTTGTCTTGGCCTATTTAGGACAAGGCGCTTTTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCATATGGTAATCCTATATACTTGTATAGTTCATCCCCACTAAGTGTAGTTAATGTTATCTCTCTTCTATCATTAAGCCACATCACCTTAATTATTTCTAGCCATTGGATGATAGATCTATGGTTCAAATTGTCTCTTCTTTCTTCCCTCATAACACCAAGTAATCTCAATTTTTTAGGCCTCAAAATTCATAAGTATCAATTTGTTTTAGTTTTAATATTCGTATTTAATCTTATTTGTGCATATTATGCAACTTAATTTCCCTCAGCAATGTGGCAGGGTATTCATCTAGTAATAACTTAATATATGGTTATACTTTTTAGTGCAAATCTGTCTATTTATCTGCTTTTTAATAAGTTGTAATGCTCAGTGTTCTACATGCGCTTACCCTGTTCCATATTGAACAGCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGGAATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAACGTGTTTGTACAAGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGATAAGAACCAGGAGAGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTCATACAGCGGGAGGCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAGGAGCCTCCAACCCCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGACGTCCCTCTCCTGGCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCAACGCCTCAGCACGATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTCATCAGGCAGGCCAAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCCAGGAAGAATTCCTGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGGAACAACTGCCGCAGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTGCGCTTGACCTCTTATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGTTCGTTGCTATCAAGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAAGAGTATAGTTGCACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCACGTCTCCTGTAATTTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAACACATCAGAGTGTGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCCATGTACTAGACAAGGTACTCGTTTTGAGTTTTTGAGTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3903#0 TCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGATCTCTCCTCCTCCT 60 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 CCTCCTCCATCCGCGCCTCCACATCTCCACACGCAACACACGGAGACGAATTTTTCTCCT 120 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 GGTCCCTTCTCGCCTCGCCTCGCCTCGCCTCTCGATCCGATCGGGATACTATGGCCGCGT 180 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 CGTCGTCGTCGTCGGCGTCGGCGTCGGCGATGGGCGGCGGGGGGATGCGGAAGGCGCCGT 240 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 CGATGGAGTGGCGGTGGGTATCCACGGAGGAGGACGACGAGGGGGAGGAGGACGGGGACA 300 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 CGGTGGAGGCGGCGGCCGCGGCCGTCGGGGCCGTGGGCAGGGGCGGGAGCTTCGGGTCCG 360 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 AGGAGGAGGAGGACGAGGAGGACGGCGGCGGCGGCGGCGAGGGGGAGGGGGAGGGCGAGG 420 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 ATGGGGAGAAGCAGAAGCTGATCCGCACCGTGCCGTCCGTCGACTGGTTCGACGTCGAGG 480 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 GCTACGAGGTCTCCGTCGCGCAGCACATCGAGGACAGCGAGGAGTTTGATTTTGGCAGGA 540 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 CAATGTTTCTTGCCCTTCAGACTCTTGCTGTGGTGTTTGGAGATATTGGAATAAGTCCAT 600 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 TGTATACATTTGATGTCATGTTCAGCAAGTATCCCATTCTTGGAGAGGAGGATGTTCTTG 660 consensus_3903#1 ------------------------------------------------------------ consensus_3903#0 GAGCACTGTCACTTGTCCTTTATACTCTAATTTCGATGCCACTAGTGAAGTATGTCTTAG 720 consensus_3903#1 ------------------------------------------GACTAAGTTAGAACATTA 18 * * * ** * * consensus_3903#0 TCGTCCTTTGGGCTAATGATGATGGTGAAGGTGGTATATTTGCGTTGTACTCTTTGATTT 780 consensus_3903#1 ACATCTTTCAGTGATTCCATGACTCTACAGGTGGTATATTTGCGTTGTACTCTTTGATTT 78 * ** ** * **** * ******************************** consensus_3903#0 GCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGGATGTCGA 840 consensus_3903#1 GCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGGATGTCGA 138 ************************************************************ consensus_3903#0 GTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGATCCATAAAAGTAAAGGAGAAGC 900 consensus_3903#1 GTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGACCCATAAAAGTAAAGGAGAAGC 198 ************************************** ********************* consensus_3903#0 TTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGGACTGCAA 960 consensus_3903#1 TTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGGACTGCAA 258 ************************************************************ consensus_3903#0 TGTTCGTATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTCAGTGGCT 1020 consensus_3903#1 TGTTCATATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTCAGTGGCT 318 ***** ****************************************************** consensus_3903#0 TGAAAGTTGGGATACCAAATGCCTCACAAGG----------------------------- 1051 consensus_3903#1 TGAAAGTTGGGATACCAAATGCCTCACAAGGTGATCCTTTAGATCCCTGTATCTGATAGC 378 ******************************* consensus_3903#0 ----------------------------------------------CCTTGTGGTGATGA 1065 consensus_3903#1 ACCTAAGCAAACTATTTATTTAACTCCACTAAATGTTATTTGCAGGCCTTGTGGTGATGA 438 ************** consensus_3903#0 TTTCAGTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGG 1125 consensus_3903#1 TTTCAGTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGG 498 ************************************************************ consensus_3903#0 GGTTTGCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATAT 1185 consensus_3903#1 GGTTTGCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATAT 558 ************************************************************ consensus_3903#0 ACAATCTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTT 1245 consensus_3903#1 ACAATCTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTT 618 ************************************************************ consensus_3903#0 ATTATTTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTG 1305 consensus_3903#1 ATTATTTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTG 678 ************************************************************ consensus_3903#0 CAACAGGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGT 1365 consensus_3903#1 CAACAGGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGT 738 ************************************************************ consensus_3903#0 CAATGTTTGCGCTTCTTGTTCTTCCTTGCCTTGTCTTGGCCAATTTAGGACAAGGCGCTT 1425 consensus_3903#1 CAATGTTTGCGCTTCTTGTTCCTCCTTGCCTTGTCTTGGCCTATTTAGGACAAGGCGCTT 798 ********************* ******************* ****************** consensus_3903#0 TTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAG 1485 consensus_3903#1 TTCTTATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAG 858 ************************************************************ consensus_3903#0 TTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGA 1545 consensus_3903#1 TTTTCTGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGA 918 ************************************************************ consensus_3903#0 CGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCA 1605 consensus_3903#1 CGACAGCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCA 978 ************************************************************ consensus_3903#0 AGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGT 1665 consensus_3903#1 AGATCATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGT 1038 ************************************************************ consensus_3903#0 TTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCA 1725 consensus_3903#1 TTTTATTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCA 1098 ************************************************************ consensus_3903#0 ATGCATATG--------------------------------------------------- 1734 consensus_3903#1 ATGCATATGGTAATCCTATATACTTGTATAGTTCATCCCCACTAAGTGTAGTTAATGTTA 1158 ********* consensus_3903#0 ------------------------------------------------------------ consensus_3903#1 TCTCTCTTCTATCATTAAGCCACATCACCTTAATTATTTCTAGCCATTGGATGATAGATC 1218 consensus_3903#0 ------------------------------------------------------------ consensus_3903#1 TATGGTTCAAATTGTCTCTTCTTTCTTCCCTCATAACACCAAGTAATCTCAATTTTTTAG 1278 consensus_3903#0 ------------------------------------------------------------ consensus_3903#1 GCCTCAAAATTCATAAGTATCAATTTGTTTTAGTTTTAATATTCGTATTTAATCTTATTT 1338 consensus_3903#0 ------------------------------------------------------------ consensus_3903#1 GTGCATATTATGCAACTTAATTTCCCTCAGCAATGTGGCAGGGTATTCATCTAGTAATAA 1398 consensus_3903#0 ------------------------------------------------------------ consensus_3903#1 CTTAATATATGGTTATACTTTTTAGTGCAAATCTGTCTATTTATCTGCTTTTTAATAAGT 1458 consensus_3903#0 -------------------------------------------------CCATAGCTGAG 1745 consensus_3903#1 TGTAATGCTCAGTGTTCTACATGCGCTTACCCTGTTCCATATTGAACAGCCATAGCTGAG 1518 *********** consensus_3903#0 CTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAA 1805 consensus_3903#1 CTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTTCTAATTTGGGAA 1578 ************************************************************ consensus_3903#0 ACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTC 1865 consensus_3903#1 ACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTAGAGTTGGTTTTC 1638 ************************************************************ consensus_3903#0 TTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCT 1925 consensus_3903#1 TTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATAATTTTTGCATCT 1698 ************************************************************ consensus_3903#0 GGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAA 1985 consensus_3903#1 GGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAGTATGACAGTGAA 1758 ************************************************************ consensus_3903#0 GTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATT 2045 consensus_3903#1 GTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAACCTTGGTACTATT 1818 ************************************************************ consensus_3903#0 AGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTT 2105 consensus_3903#1 AGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTTCCGGCAATTTTT 1878 ************************************************************ consensus_3903#0 GGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGG 2165 consensus_3903#1 GGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTTGTATGCATCAGG 1938 ************************************************************ consensus_3903#0 AATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAACGTGTTTGTACA 2225 consensus_3903#1 AATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAACGTGTTTGTACA 1998 ************************************************************ consensus_3903#0 AGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGATAAGAACCAGGAG 2285 consensus_3903#1 AGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGATAAGAACCAGGAG 2058 ************************************************************ consensus_3903#0 AGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTCATACAGCGGGAG 2345 consensus_3903#1 AGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTCATACAGCGGGAG 2118 ************************************************************ consensus_3903#0 GCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAGGAGCCTCCAACC 2405 consensus_3903#1 GCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAGGAGCCTCCAACC 2178 ************************************************************ consensus_3903#0 CCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGACGTCCCTCTCCTG 2465 consensus_3903#1 CCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGACGTCCCTCTCCTG 2238 ************************************************************ consensus_3903#0 GCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCAACGCCTCAGCAC 2525 consensus_3903#1 GCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCAACGCCTCAGCAC 2298 ************************************************************ consensus_3903#0 GATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTCATCAGGCAGGCC 2585 consensus_3903#1 GATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTCATCAGGCAGGCC 2358 ************************************************************ consensus_3903#0 AAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCCAGGAAGAATTCC 2645 consensus_3903#1 AAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCCAGGAAGAATTCC 2418 ************************************************************ consensus_3903#0 TGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGGAACAACTGCCGC 2705 consensus_3903#1 TGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGGAACAACTGCCGC 2478 ************************************************************ consensus_3903#0 AGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTGCGCTTGACCTCT 2765 consensus_3903#1 AGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTGCGCTTGACCTCT 2538 ************************************************************ consensus_3903#0 TATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGTTCGTTGCTATCA 2825 consensus_3903#1 TATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGTTCGTTGCTATCA 2598 ************************************************************ consensus_3903#0 AGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAAGAGTATAGTTGC 2885 consensus_3903#1 AGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAAGAGTATAGTTGC 2658 ************************************************************ consensus_3903#0 ACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCACGTCTCCTGTAAT 2945 consensus_3903#1 ACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCACGTCTCCTGTAAT 2718 ************************************************************ consensus_3903#0 TTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAACACATCAGAGTG 3005 consensus_3903#1 TTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAACACATCAGAGTG 2778 ************************************************************ consensus_3903#0 TGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCCATGTACTAGACA 3065 consensus_3903#1 TGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCCATGTACTAGACA 2838 ************************************************************ consensus_3903#0 AGGTACTCGTTTTGAGTTTTTGAGTAAAAATTTTGATATCTACAAG 3111 consensus_3903#1 AGGTACTCGTTTTGAGTTTTTGAGTAA------------------- 2865 *************************** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||