cluster # 3905

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Oryza sativa
cluster # 3905 cluster # 3905 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3905#0 length = 2778 sequences # 2

consensus_3905#1 length = 959 sequences # 1

consensusID : consensus_3905#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2778
fasta sequence

                              [CACTCGCTCCTCTGTACTGCCGCCGCGCCGCTGCATCCTCGCCGAAGTCGTCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGACGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCCGCTGCGGCCAGCGCCGAGGGCGGCCCCTTCCGCCGCCGCCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTAGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCAGGGTCGTGTGGTCGCCGTCGTGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCAGTCGGGTAGCCGCCACCGACCCTTGCCCTTCGCTGCCCCGTCATCACGGTCGTCCAAGCCGCGTGCCGCCATCGCCAGCCATCCTTCTTACACTCACAGAATGTAGCGTATCTTAGCAGATGCCAATGTGAATGCAGTGACATATGTGGGCTTCAGTAATTAGGAGGAACCAAATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATCTAGCTTGATTGATTGACTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCTCCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATAGTTCTTCCTTACTGTGATTCATGTGCTTCAAGTTAATAGTCTGGTTCTTTCAAAATGAGCAGATCAGTGCTTCTTGAGGTATTCTACTAATAACCTTTGCCTTTGGTTTTACTCACACTCTGTGAGTGTGTAAAAGTAGCTTTCCACTGGACTTCCTTGATTTCCATGGATATGCAGTTAGACATAGGTGTGTGACGCATTAACGTGTCTTTCTGCAGGTTGGCACTTGATAATTTTGTATTGTAATATATAAATAACTCAGTTGCGCAGGTGATTAATGGTTGACAGAAAATTGCCTTCAATTTAGTTCCGTCAATAAGATACTGTGATCTAACTCAATTCTCTTCCATGCCTGACAGCATTGATTCTTGCTGTAAATTTGTATTTCTCTACAAATCAACTTTTATTGCTGAAAAAATATTCACTTCAAATACATAGATGTGCTTTAATGACTATTTATGATGAAATTCATTCAAAGCTTTGGTTTGCCATCGTTTGGCCACCAGTTTTTAATTCCGATTGCTACAGAGGAATTCGCTGTTAGTTTTTATTTGCTATGCTTGTTTCTAATTTACCTTGCAGTTGCAATTACGGAGCCCTCACCAAGAACGGCAACAACAGCAGGCAAAGCTCAACAGATTTGGGTTTGGCGCTGCAAGCTGGAAGAAGTAGGCGCATCAACAGCATAATCCTTTCAGTTTTGGGATACAAGATGCGAGTGCTCAGTCACGAAATGCTCTTGGCCAATCAAAGCTTTTCCAAATATGTGAGGTAAGGAACAGATGGACATGGAAGAATTGGAGGTAACCAATATTGTTACGCATATATTTTCCTATCTGAATCTGTTGTAGAGAATGGCAGATTTCCTTCTCACAGGCATAATTGCAGACGGTCAATACTTTGAAAGGGTAGCTTCGGTTAGAGGTTTGTAGTACCTTTGCTAGCATTTATCTACTCATCTTGGAGATATTAGTTAATTGTGAATCGATGAGCAGTGGTCAAAAAGAAGAAAGAGCATGAATTCCATAACTAAATCTTGTGGGCTATTTTGTCAATCCATAACTAAACCTCAGTAAAACTTTTAGTACCCAACCTGTAGATCATAACTGAATATTCACCTAATATTGTGGCCTACAATTTCATTTCCCAATTCGATGCTCTAGAAGTTTAGAACTATAACATGCATAATTTCATTTTTCTTGCACTGCATAATTTTGTAATTACAGCATGTATTGGACAAACCTGCATCTTTTGCTTGTATATAAAGATTATGTTGTAGAAAGCAGTGGAAATGATTTTTGATGTTTCGGTTCAGTATGCAGTGGATAACGCTGGTGAAAGCTCCAAACCAAATTCGTCCGCACGAACAGAAAATGACAATGTATCTTGCATCCAGCATTTGTTTCTTCAGAAAATGTACAATGCCTATACCATTCAGTGTCACAAAATGTTTCTTCAGACCACACAAAGTATGGGATTGCCACGATTAAATCTTCTATCCCTATAAGCTACAATTGATGTACAGATAATTGAATCAACATATACTTCTTATGAAGAAGAATCACTATTGGTGCATATTTCACATGGTTTGGTAACTAATTTGATTGCGGCTATCCATGGGCGTGAAGCAGCATATACAGTTGCAGTTCTAGGAGAACCATGTCATCATGTAAAAAACATGGCAAGACGCAGGAATGTTGGCTGGATCAATTTTTCATTGATCCATTATTTGGTCTTGATATGGAAAATGTAACAAGATGCTACAGAAGGAGCTGGATCACACACCAACACACACCAACAGTAAAAACTGACCCTTCATACTGGGTGGCAGGACGAGCAGCTACCTTGAATAACTCTATTGATACATGCAAGAATGTACAGTATATTTAATTGAAAGCATGTCACGTCCATGACTTTTGACAAACTAGAGAATGTTGTA]

[+] EMBL AK073178             [CACTCGCTCCTCTGTACTGCCGCCGCGCCGCTGCATCCTCGCCGAAGTCGTCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGACGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCCGCTGCGGCCAGCGCCGAGGGCGGCCCCTTCCGCCGCCGCCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTAGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCAGGGTCGTGTGGTCGCCGTCGTGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCAGTCGGGTAGCCGCCACCGACCCTTGCCCTTCGCTGCCCCGTCATCACGGTCGTCCAAGCCGCGTGCCGCCATCGCCAGCCATCCTTCTTACACTCACAGAATGTAGCGTATCTTAGCAGATGCCAATGTGAATGCAGTGACATATGTGGGCTTCAGTAATTAGGAGGAACCAAATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATCTAGCTTGATTGATTGACTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCTCCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATAGTTCTTCCTTACTGTGATTCATGTGCTTCAAGTTAATAGTCTGGTTCTTTCAAAATGAGCAGATCAGTGCTTCTTGAGGTATTCTACTAATAACCTTTGCCTTTGGTTTTACTCACACTCTGTGAGTGTGTAAAAGTAGCTTTCCACTGGACTTCCTTGATTTCCATGGATATGCAGTTAGACATAGGTGTGTGACGCATTAACGTGTCTTTCTGCAGGTTGGCACTTGATAATTTTGTATTGTAATATATAAATAACTCAGTTGCGCAGGTGATTAATGGTTGACAGAAAATTGCCTTCAATTTAGTTCCGTCAATAAGATACTGTGATCTAACTCAATTCTCTTCCATGCCTGACAGCATTGATTCTTGCTGTAAATTTGTATTTCTCTACAAATCAACTTTTATTGCTGAAAAAATATTCACTTCAAATACATAGATGTGCTTTAATGACTATTTATGATGAAATTCATTCAAAGCTTTGGTTTGCCATCGTTTGGCCACCAGTTTTTAATTCCGATTGCTACAGAGGAATTCGCTGTTAGTTTTTATTTGCTATGCTTGTTTCTAATTTACCTTGCAGTTGCAATTACGGAGCCCTCACCAAGAACGGCAACAACAGCAGGCAAAGCTCAACAGATTTGGGTTTGGCGCTGCAAGCTGGAAGAAGTAGGCGCATCAACAGCATAATCCTTTCAGTTTTGGGATACAAGATGCGAGTGCTCAGTCACGAAATGCTCTTGGCCAATCAAAGCTTTTCCAAATATGTGAGGTAAGGAACAGATGGACATGGAAGAATTGGAGGTAACCAATATTGTTACGCATATATTTTCCTATCTGAATCTGTTGTAGAGAATGGCAGATTTCCTTCTCACAGGCATAATTGCAGACGGTCAATACTTTGAAAGGGTAGCTTCGGTTAGAGGTTTGTAGTACCTTTGCTAGCATTTATCTACTCATCTTGGAGATATTAGTTAATTGTGAATCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK119419             [    CGCTCCTCTGTACTGCCGCCGCGCCGCTGCATCCTCGCCGAAGTCGTCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGACGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCCGCTGCGGCCAGCGCCGAGGGCGGCCCCTTCCGCCGCCGCCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTAGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCAGGGTCGTGTGGTCGCCGTCGTGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCAGTCGGGTAGCCGCCACCGACCCTTGCCCTTCGCTGCCCCGTCATCACGGTCGTCCAAGCCGCGTGCCGCCATCGCCAGCCATCCTTCTTACACTCACAGAATGTAGCGTATCTTAGCAGATGCCAATGTGAATGCAGTGACATATGTGGGCTTCAGTAATTAGGAGGAACCAAATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATCTAGCTTGATTGATTGACTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCTCCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATAGTTCTTCCTTACTGTGATTCATGTGCTTCAAGTTAATAGTCTGGTTCTTTCAAAATGAGCAGATCAGTGCTTCTTGAGGTATTCTACTAATAACCTTTGCCTTTGGTTTTACTCACACTCTGTGAGTGTGTAAAAGTAGCTTTCCACTGGACTTCCTTGATTTCCATGGATATGCAGTTAGACATAGGTGTGTGACGCATTAACGTGTCTTTCTGCAGGTTGGCACTTGATAATTTTGTATTGTAACATATAAATAACTCAGTTGCGCAGGTGATTAATGGTTGACAGAAAATTGCCTTCAATTTAGTTCCGTCAATAAGATACTGTGATCTAACTCAATTCTCTTCCATGCCTGACAGCATTGATTCTTGCTGTAAATTTGTATTTCTCTACAAATCAACTTTTATTGCTGAAAAAATATTCACTTCAAATACATAGATGTGCTTTAATGACTATTTATGATGAAATTCATTCAAAGCTTTGGTTTGCCATCGTTTGGCCACCAGTTTTTAATTCCGATTGCTACAGAGGAATTCGCTGTTAGTTTTTATTTGCTATGCTTGTTTCTAATTTACCTTGCAGTTGCAATTACGGAGCCCTCACCAAGAACGGCAACAACAGCAGGCAAAGCTCAACAGATTTGGGTTTGGCGCTGCAAGCTGGAAGAAGTAGGCGCATCAACAGCATAATCCTTTCAGTTTTGGGATACAAGATGCGAGTGCTCAGTCACGAAATGCTCTTGGCCAATCAAAGCTTTTCCAAATATGTGAGGTAAGGAACAGATGGACATGGAAGAATTGGAGGTAACCAATATTGTTACGCATATATTTTCCTATCTGAATCTGTTGTAGAGAATGGCAGATTTCCTTCTCACAGGCATAATTGCAGACGGTCAATACTTTGAAAGGGTAGCTTCGGTTAGAGGTTTGTAGTACCTTTGCTAGCATTTATCTACTCATCTTGGAGATATTAGTTAATTGTGAATCGATGAGCAGTGGTCAAAAAGAAGAAAGAGCATGAATTCCATAACTAAATCTTGTGGGCTATTTTGTCAATCCATAACTAAACCTCAGTAAAACTTTTAGTACCCAACCTGTAGATCATAACTGAATATTCACCTAATATTGTGGCCTACAATTTCATTTCCCAATTCGATGCTCTAGAAGTTTAGAACTATAACATGCATAATTTCATTTTTCTTGCACTGCATAATTTTGTAATTACAGCATGTATTGGACAAACCTGCATCTTTTGCTTGTATATAAAGATTATGTTGTAGAAAGCAGTGGAAATGATTTTTGATGTTTCGGTTCAGTATGCAGTGGATAACGCTGGTGAAAGCTCCAAACCAAATTCGTCCGCACGAACAGAAAATGACAATGTATCTTGCATCCAGCATTTGTTTCTTCAGAAAATGTACAATGCCTATACCATTCAGTGTCACAAAATGTTTCTTCAGACCACACAAAGTATGGGATTGCCACGATTAAATCTTCTATCCCTATAAGCTACAATTGATGTACAGATAATTGAATCAACATATACTTCTTATGAAGAAGAATCACTATTGGTGCATATTTCACATGGTTTGGTAACTAATTTGATTGCGGCTATCCATGGGCGTGAAGCAGCATATACAGTTGCAGTTCTAGGAGAACCATGTCATCATGTAAAAAACATGGCAAGACGCAGGAATGTTGGCTGGATCAATTTTTCATTGATCCATTATTTGGTCTTGATATGGAAAATGTAACAAGATGCTACAGAAGGAGCTGGATCACACACCAACACACACCAACAGTAAAAACTGACCCTTCATACTGGGTGGCAGGACGAGCAGCTACCTTGAATAACTCTATTGATACATGCAAGAATGTACAGTATATTTAATTGAAAGCATGTCACGTCCATGACTTTTGACAAACTAGAGAATGTTGTA]




>consensus_3905#0
CACTCGCTCCTCTGTACTGCCGCCGCGCCGCTGCATCCTCGCCGAAGTCGTCTTCTTCTC
CGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGG
CCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGACGCGCCGCCGCA
TCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCCGCTGCGGCCA
GCGCCGAGGGCGGCCCCTTCCGCCGCCGCCGCCGACGCAGTCAGTGCCTCCCTCTACCGC
CGCCTAGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCAGGGTCGTGTGGTC
GCCGTCGTGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCT
CGCCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCAC
CTCCTCAGTCGGGTAGCCGCCACCGACCCTTGCCCTTCGCTGCCCCGTCATCACGGTCGT
CCAAGCCGCGTGCCGCCATCGCCAGCCATCCTTCTTACACTCACAGAATGTAGCGTATCT
TAGCAGATGCCAATGTGAATGCAGTGACATATGTGGGCTTCAGTAATTAGGAGGAACCAA
ATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATC
TAGCTTGATTGATTGACTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCT
CCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATAG
TTCTTCCTTACTGTGATTCATGTGCTTCAAGTTAATAGTCTGGTTCTTTCAAAATGAGCA
GATCAGTGCTTCTTGAGGTATTCTACTAATAACCTTTGCCTTTGGTTTTACTCACACTCT
GTGAGTGTGTAAAAGTAGCTTTCCACTGGACTTCCTTGATTTCCATGGATATGCAGTTAG
ACATAGGTGTGTGACGCATTAACGTGTCTTTCTGCAGGTTGGCACTTGATAATTTTGTAT
TGTAATATATAAATAACTCAGTTGCGCAGGTGATTAATGGTTGACAGAAAATTGCCTTCA
ATTTAGTTCCGTCAATAAGATACTGTGATCTAACTCAATTCTCTTCCATGCCTGACAGCA
TTGATTCTTGCTGTAAATTTGTATTTCTCTACAAATCAACTTTTATTGCTGAAAAAATAT
TCACTTCAAATACATAGATGTGCTTTAATGACTATTTATGATGAAATTCATTCAAAGCTT
TGGTTTGCCATCGTTTGGCCACCAGTTTTTAATTCCGATTGCTACAGAGGAATTCGCTGT
TAGTTTTTATTTGCTATGCTTGTTTCTAATTTACCTTGCAGTTGCAATTACGGAGCCCTC
ACCAAGAACGGCAACAACAGCAGGCAAAGCTCAACAGATTTGGGTTTGGCGCTGCAAGCT
GGAAGAAGTAGGCGCATCAACAGCATAATCCTTTCAGTTTTGGGATACAAGATGCGAGTG
CTCAGTCACGAAATGCTCTTGGCCAATCAAAGCTTTTCCAAATATGTGAGGTAAGGAACA
GATGGACATGGAAGAATTGGAGGTAACCAATATTGTTACGCATATATTTTCCTATCTGAA
TCTGTTGTAGAGAATGGCAGATTTCCTTCTCACAGGCATAATTGCAGACGGTCAATACTT
TGAAAGGGTAGCTTCGGTTAGAGGTTTGTAGTACCTTTGCTAGCATTTATCTACTCATCT
TGGAGATATTAGTTAATTGTGAATCGATGAGCAGTGGTCAAAAAGAAGAAAGAGCATGAA
TTCCATAACTAAATCTTGTGGGCTATTTTGTCAATCCATAACTAAACCTCAGTAAAACTT
TTAGTACCCAACCTGTAGATCATAACTGAATATTCACCTAATATTGTGGCCTACAATTTC
ATTTCCCAATTCGATGCTCTAGAAGTTTAGAACTATAACATGCATAATTTCATTTTTCTT
GCACTGCATAATTTTGTAATTACAGCATGTATTGGACAAACCTGCATCTTTTGCTTGTAT
ATAAAGATTATGTTGTAGAAAGCAGTGGAAATGATTTTTGATGTTTCGGTTCAGTATGCA
GTGGATAACGCTGGTGAAAGCTCCAAACCAAATTCGTCCGCACGAACAGAAAATGACAAT
GTATCTTGCATCCAGCATTTGTTTCTTCAGAAAATGTACAATGCCTATACCATTCAGTGT
CACAAAATGTTTCTTCAGACCACACAAAGTATGGGATTGCCACGATTAAATCTTCTATCC
CTATAAGCTACAATTGATGTACAGATAATTGAATCAACATATACTTCTTATGAAGAAGAA
TCACTATTGGTGCATATTTCACATGGTTTGGTAACTAATTTGATTGCGGCTATCCATGGG
CGTGAAGCAGCATATACAGTTGCAGTTCTAGGAGAACCATGTCATCATGTAAAAAACATG
GCAAGACGCAGGAATGTTGGCTGGATCAATTTTTCATTGATCCATTATTTGGTCTTGATA
TGGAAAATGTAACAAGATGCTACAGAAGGAGCTGGATCACACACCAACACACACCAACAG
TAAAAACTGACCCTTCATACTGGGTGGCAGGACGAGCAGCTACCTTGAATAACTCTATTG
ATACATGCAAGAATGTACAGTATATTTAATTGAAAGCATGTCACGTCCATGACTTTTGAC
AAACTAGAGAATGTTGTA

consensusID : consensus_3905#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 959
fasta sequence

                              [CCTCGGCGTCCTCGCTCGCTCCTCTGTACTGCCGCCACGCCGCTGCATCCTCGCCGAAGCCGCCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGCCGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCTGCCGCGGCCAGCGCCGAGGGAGGCCCCATCCGCCGCCGCCGCCACCATCATCGCCGCCTCATTCCCACTTCGCGTTGTGCCTCCCTCCGCTGCTACCGCATCGGCTCCTGTCGCTGCTTCCGCCGCTCCCGTCTTCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTGGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCGGGGTCGTGCGGTCGCCGTCGCGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCGCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCGGTCGGGTAGCCGCCGCCGACCCCTGCCCTTCGCTGCCCAGCTGTCATCACGGCCGGTCGTCCAAGCCGCGCGCCGCCATCGCCAGCCATCCTTCTTACACTCAAAGAATGTAGCGTATCTTAGCAGATGCCAATGTGAATGCAGTGACATATGTAGGCTTCAGTAATTAGGAGGAACCAAATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATCTAGCTTGATTGATTGGCTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCTCCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATA]

[+] EMBL AK109124             [CCTCGGCGTCCTCGCTCGCTCCTCTGTACTGCCGCCACGCCGCTGCATCCTCGCCGAAGCCGCCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGCCGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCTGCCGCGGCCAGCGCCGAGGGAGGCCCCATCCGCCGCCGCCGCCACCATCATCGCCGCCTCATTCCCACTTCGCGTTGTGCCTCCCTCCGCTGCTACCGCATCGGCTCCTGTCGCTGCTTCCGCCGCTCCCGTCTTCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTGGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCGGGGTCGTGCGGTCGCCGTCGCGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCGCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCGGTCGGGTAGCCGCCGCCGACCCCTGCCCTTCGCTGCCCAGCTGTCATCACGGCCGGTCGTCCAAGCCGCGCGCCGCCATCGCCAGCCATCCTTCTTACACTCAAAGAATGTAGCGTATCTTAGCAGATGCCAATGTGAATGCAGTGACATATGTAGGCTTCAGTAATTAGGAGGAACCAAATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATCTAGCTTGATTGATTGGCTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCTCCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATA]




>consensus_3905#1
CCTCGGCGTCCTCGCTCGCTCCTCTGTACTGCCGCCACGCCGCTGCATCCTCGCCGAAGC
CGCCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTAC
CATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGC
CGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCAT
CTGCCGCGGCCAGCGCCGAGGGAGGCCCCATCCGCCGCCGCCGCCACCATCATCGCCGCC
TCATTCCCACTTCGCGTTGTGCCTCCCTCCGCTGCTACCGCATCGGCTCCTGTCGCTGCT
TCCGCCGCTCCCGTCTTCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTGGGCCCC
CGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCGGGGTCGTGCGGTCGCCGTCGCGCCG
CCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCGCTCC
CACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCG
GTCGGGTAGCCGCCGCCGACCCCTGCCCTTCGCTGCCCAGCTGTCATCACGGCCGGTCGT
CCAAGCCGCGCGCCGCCATCGCCAGCCATCCTTCTTACACTCAAAGAATGTAGCGTATCT
TAGCAGATGCCAATGTGAATGCAGTGACATATGTAGGCTTCAGTAATTAGGAGGAACCAA
ATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATC
TAGCTTGATTGATTGGCTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCT
CCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3905#0      ------------CACTCGCTCCTCTGTACTGCCGCCGCGCCGCTGCATCCTCGCCGAAGT 48
consensus_3905#1      CCTCGGCGTCCTCGCTCGCTCCTCTGTACTGCCGCCACGCCGCTGCATCCTCGCCGAAGC 60
                                  * ********************** ********************** 

consensus_3905#0      CGTCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTAC 108
consensus_3905#1      CGCCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTAC 120
                      ** *********************************************************

consensus_3905#0      CATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGA 168
consensus_3905#1      CATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGC 180
                      *********************************************************** 

consensus_3905#0      CGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCAT 228
consensus_3905#1      CGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCAT 240
                      ************************************************************

consensus_3905#0      CCGCTGCGGCCAGCGCCGAGGGCGGCCCCTTCCGCCGCCGCCGCC--------------- 273
consensus_3905#1      CTGCCGCGGCCAGCGCCGAGGGAGGCCCCATCCGCCGCCGCCGCCACCATCATCGCCGCC 300
                      * ** ***************** ****** ***************               

consensus_3905#0      ------------------------------------------------------------
consensus_3905#1      TCATTCCCACTTCGCGTTGTGCCTCCCTCCGCTGCTACCGCATCGGCTCCTGTCGCTGCT 360
                                                                                  

consensus_3905#0      ---------------------GACGCAGTCAGTGCCTCCCTCTACCGCCGCCTAGGCCCC 312
consensus_3905#1      TCCGCCGCTCCCGTCTTCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTGGGCCCC 420
                                           ******************************** ******

consensus_3905#0      CGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCAGGGTCGTGTGGTCGCCGTCGTGCCG 372
consensus_3905#1      CGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCGGGGTCGTGCGGTCGCCGTCGCGCCG 480
                      ********************************** ******** *********** ****

consensus_3905#0      CCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCC----- 427
consensus_3905#1      CCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCGCTCC 540
                      *******************************************************     

consensus_3905#0      CACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCA 487
consensus_3905#1      CACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCG 600
                      *********************************************************** 

consensus_3905#0      GTCGGGTAGCCGCCACCGACCCTTGCCCTTCGCTGCCC---CGTCATCACGG----TCGT 540
consensus_3905#1      GTCGGGTAGCCGCCGCCGACCCCTGCCCTTCGCTGCCCAGCTGTCATCACGGCCGGTCGT 660
                      ************** ******* ***************    **********    ****

consensus_3905#0      CCAAGCCGCGTGCCGCCATCGCCAGCCATCCTTCTTACACTCACAGAATGTAGCGTATCT 600
consensus_3905#1      CCAAGCCGCGCGCCGCCATCGCCAGCCATCCTTCTTACACTCAAAGAATGTAGCGTATCT 720
                      ********** ******************************** ****************

consensus_3905#0      TAGCAGATGCCAATGTGAATGCAGTGACATATGTGGGCTTCAGTAATTAGGAGGAACCAA 660
consensus_3905#1      TAGCAGATGCCAATGTGAATGCAGTGACATATGTAGGCTTCAGTAATTAGGAGGAACCAA 780
                      ********************************** *************************

consensus_3905#0      ATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATC 720
consensus_3905#1      ATAGCAAAGAAGGCTCCTAAGCTCCTGGTGCATATTTTCAGTTATTTCATTTTCTGGATC 840
                      ************************************************************

consensus_3905#0      TAGCTTGATTGATTGACTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCT 780
consensus_3905#1      TAGCTTGATTGATTGGCTTGAACATTCCATTTTTCCAGGTGACATATATGAGGTTATGCT 900
                      *************** ********************************************

consensus_3905#0      CCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATAG 840
consensus_3905#1      CCTATAGGTTGATTTCATATTTTTTTCCCCTGTGAACGCAACTGACCTCTCGGTCAATA- 959
                      *********************************************************** 

consensus_3905#0      TTCTTCCTTACTGTGATTCATGTGCTTCAAGTTAATAGTCTGGTTCTTTCAAAATGAGCA 900
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GATCAGTGCTTCTTGAGGTATTCTACTAATAACCTTTGCCTTTGGTTTTACTCACACTCT 960
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GTGAGTGTGTAAAAGTAGCTTTCCACTGGACTTCCTTGATTTCCATGGATATGCAGTTAG 1020
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      ACATAGGTGTGTGACGCATTAACGTGTCTTTCTGCAGGTTGGCACTTGATAATTTTGTAT 1080
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TGTAATATATAAATAACTCAGTTGCGCAGGTGATTAATGGTTGACAGAAAATTGCCTTCA 1140
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      ATTTAGTTCCGTCAATAAGATACTGTGATCTAACTCAATTCTCTTCCATGCCTGACAGCA 1200
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TTGATTCTTGCTGTAAATTTGTATTTCTCTACAAATCAACTTTTATTGCTGAAAAAATAT 1260
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TCACTTCAAATACATAGATGTGCTTTAATGACTATTTATGATGAAATTCATTCAAAGCTT 1320
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TGGTTTGCCATCGTTTGGCCACCAGTTTTTAATTCCGATTGCTACAGAGGAATTCGCTGT 1380
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TAGTTTTTATTTGCTATGCTTGTTTCTAATTTACCTTGCAGTTGCAATTACGGAGCCCTC 1440
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      ACCAAGAACGGCAACAACAGCAGGCAAAGCTCAACAGATTTGGGTTTGGCGCTGCAAGCT 1500
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GGAAGAAGTAGGCGCATCAACAGCATAATCCTTTCAGTTTTGGGATACAAGATGCGAGTG 1560
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      CTCAGTCACGAAATGCTCTTGGCCAATCAAAGCTTTTCCAAATATGTGAGGTAAGGAACA 1620
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GATGGACATGGAAGAATTGGAGGTAACCAATATTGTTACGCATATATTTTCCTATCTGAA 1680
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TCTGTTGTAGAGAATGGCAGATTTCCTTCTCACAGGCATAATTGCAGACGGTCAATACTT 1740
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TGAAAGGGTAGCTTCGGTTAGAGGTTTGTAGTACCTTTGCTAGCATTTATCTACTCATCT 1800
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TGGAGATATTAGTTAATTGTGAATCGATGAGCAGTGGTCAAAAAGAAGAAAGAGCATGAA 1860
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TTCCATAACTAAATCTTGTGGGCTATTTTGTCAATCCATAACTAAACCTCAGTAAAACTT 1920
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TTAGTACCCAACCTGTAGATCATAACTGAATATTCACCTAATATTGTGGCCTACAATTTC 1980
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      ATTTCCCAATTCGATGCTCTAGAAGTTTAGAACTATAACATGCATAATTTCATTTTTCTT 2040
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GCACTGCATAATTTTGTAATTACAGCATGTATTGGACAAACCTGCATCTTTTGCTTGTAT 2100
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      ATAAAGATTATGTTGTAGAAAGCAGTGGAAATGATTTTTGATGTTTCGGTTCAGTATGCA 2160
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GTGGATAACGCTGGTGAAAGCTCCAAACCAAATTCGTCCGCACGAACAGAAAATGACAAT 2220
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GTATCTTGCATCCAGCATTTGTTTCTTCAGAAAATGTACAATGCCTATACCATTCAGTGT 2280
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      CACAAAATGTTTCTTCAGACCACACAAAGTATGGGATTGCCACGATTAAATCTTCTATCC 2340
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      CTATAAGCTACAATTGATGTACAGATAATTGAATCAACATATACTTCTTATGAAGAAGAA 2400
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TCACTATTGGTGCATATTTCACATGGTTTGGTAACTAATTTGATTGCGGCTATCCATGGG 2460
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      CGTGAAGCAGCATATACAGTTGCAGTTCTAGGAGAACCATGTCATCATGTAAAAAACATG 2520
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      GCAAGACGCAGGAATGTTGGCTGGATCAATTTTTCATTGATCCATTATTTGGTCTTGATA 2580
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TGGAAAATGTAACAAGATGCTACAGAAGGAGCTGGATCACACACCAACACACACCAACAG 2640
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      TAAAAACTGACCCTTCATACTGGGTGGCAGGACGAGCAGCTACCTTGAATAACTCTATTG 2700
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      ATACATGCAAGAATGTACAGTATATTTAATTGAAAGCATGTCACGTCCATGACTTTTGAC 2760
consensus_3905#1      ------------------------------------------------------------
                                                                                  

consensus_3905#0      AAACTAGAGAATGTTGTA 2778
consensus_3905#1      ------------------