cluster # 3942

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Oryza sativa
cluster # 3942 cluster # 3942 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3942#0 length = 928 sequences # 3

consensusID : consensus_3942#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 928
fasta sequence

                              [ACCACCTCGCTCTTTGCATTTCTTGATTTCTCCTCGATCACCTAGTAGTTGATCGAGCAATGGCGGCCAAGGTGCACCCCAACCTGGCCGTGCCGTCGCTGATCCAGCCGCCGATGGCGCCACCGGCGGCGATGGCGGCGGGGGACAGCGTGATGAAGACGAAGGCGGCGGCGGCGGGCGGGGATGTGGTGCTGACGGTGTGGAGGAAGTCGCTACTGTTCAACTGCAGGGGGTTCACGGTGTTCGACGCGAGCGGCGACCTGGTGTACCGGGTGGACAGCTACGCGGCGGACTCGCGCGCGGAGGTGGTGCTCATGGACGCCGCGGGCGTGCCCGTGCTCACCGTCCGCCGCAAGAAGGCGATCGGCAGCCAGCTC-GGGCTTGGGGGCGACCAGTGGCTGGTCCACCCCGGGGAGGAGACCCGCCTCCCGCCGCTCTACGCCGTGAAGCGG-ACGCCGCAGTACGTCCGCGGCGGCGGCAGCGTCAAGACCATGGCGCACGT-CGCGCCCTGCGGCGTCGCCCTCGGCGCCGGCGGCGGCGGTGGCTACGAGATCGAAGGCTCGTACCTGCGGCGGAGCTGCGCGGTGTA-CG-ACGCGCGGCGGCGCGCGGTGGTGGCGGAGGTGCAGGCGAAGGAGGCGGTGGGGACGGACGTGTTCCGGCTGGTGGTGCGGCCGGGGATGGAGGTGTCGGTGGCCATGGCCGTCGTGCTGGCGCTGGAGCAGATGTTCGGCAAGCCCTCCCTGCTCAGGAGCTGGTCCTCCTAATAATTAGCCTGTTTCTTTCTTTCTCTTTTTTTTTCTTTTTTTTTTTGGCCTTGAATTTCCAACATTGTTTGGGCCTGAGAGCAGAAGAGTTGCTCTTGGCTGCCTCTTTCTCTCTGATCCTGAAATGAAACCTCAAATTGGGTGTCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071834             [ACCACCTCGCTCTTTGCATTTCTTGATTTCTCCTCGATCACCTAGTAGTTGATCGAGCAATGGCGGCCAAGGTGCACCCCAACCTGGCCGTGCCGTCGCTGATCCAGCCGCCGATGGCGCCACCGGCGGCGATGGCGGCGGGGGACAGCGTGATGAAGACGAAGGCGGCGGCGGCGGGCGGGGATGTGGTGCTGACGGTGTGGAGGAAGTCGCTACTGTTCAACTGCAGGGGGTTCACGGTGTTCGACGCGAGCGGCGACCTGGTGTACCGGGTGGACAGCTACGCGGCGGACTCGCGCGCGGAGGTGGTGCTCATGGACGCCGCGGGCGTGCCCGTGCTCACCGTCCGCCGCAAGAAGGCGATCGGCAGCCAGCTC GGGCTTGGGGGCGACCAGTGGCTGGTCCACCCCGGGGAGGAGACCCGCCTCCCGCCGCTCTACGCCGTGAAGCGG ACGCCGCAGTACGTCCGCGGCGGCGGCAGCGTCAAGACCATGGCGCACGT CGCGCCCTGCGGCGTCGCCCTCGGCGCCGGCGGCGGCGGTGGCTACGAGATCGAAGGCTCGTACCTGCGGCGGAGCTGCGCGGTGTA CG ACGCGCGGCGGCGCGCGGTGGTGGCGGAGGTGCAGGCGAAGGAGGCGGTGGGGACGGACGTGTTCCGGCTGGTGGTGCGGCCGGGGATGGAGGTGTCGGTGGCCATGGCCGTCGTGCTGGCGCTGGAGCAGATGTTCGGCAAGCCCTCCCTGCTCAGGAGCTGGTCCTCCTAATAATTAGCCTGTTTCTTTCTTTCTCTTTTTTTTTCTTTTTTTTTTTGGCCTTGAATTTCCAACATTGTTTGGGCCTGAGAGCAGAAGAGTTGCTCTTGGCTGCCTCTTTCTCTCTGATCCTGAAATGAAACCTCAAATTGGGTGTCA                 ]
[+] EMBL AU076233             [                     CTTGATTTCTCCTCGATCACCTAGTAGTTGATCGAGCAATGGCGGCCAAGGTGCACCCCAACCTGGCCGTGCCGTCGCTGATCCAGCCGCCGATGGCGCCACCGGCGGCGATGGCGGCGGGGGACAGCGTGATGAAGACGAAGGCGGCGGCGGCGGGCGGGGATGTGGTGCTGACGGTGTGGAGGAAGTCGCTACTGTTCAACTGCAGGGGGTTCACGGTGTTCGACGCGAGCGGCGACCTGGTGTACCGGGTGGACAGCTACGCGGCGGACTCGCGCGCGGAGGTGGTGCTCATGGACGCCGCGGGCGTGCCCGTGCTCACCGTCCGCCGCAAGAAGGCGATCGGCAGCCAGCTCGGGGCTTGGGGGCGACCAGTGGCTGGTCCACCCCGGGGAGGAGACCCGCCTCCCGCCGCTCTACACCGTGAAGCGGAACNCCGCAGTACGTCCGCGGCGGCGGCANCGTCAAGACCATGGCGCACNT CGCGCCCTGCGGCGTCGCCCTC                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU076234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGTACGTCCGCGGCGGCGGNAGCGTCAAGACCATGGCGCACGTCCGCNCCCTGCGGCGTCGCCCTCGGC CCNGCGGCGGCGGTGGCTACGAGATCGAAGGCTCGTACCTGCGGCGGA NTGCGCGGTGTATCGNAC CGCGGCGGCGCGCGGTGGTGGCGGAGGTGCAGGCGAAGGAGGCNGTGGGGACGGACGTGTTCCGGCTGGTGGTGCGGCCGGGGATGGAGGTGTCGGTGGCCATGGCCGTCGTG TGGCGCTGGAGCAGATGTTCGGCAAGCCCTCCCTGCTCAGGAGCTGGTCCTCCTAATAATTAGCCTGTTTCTTTCTTTCTCTTTTTTTTTC TTTTTTTTTTGGCCTTGAATTTCCAACATTGTTTGGGCCTGAGAGCAGAAGAGTTGCTCTTGGCTGCCTCTTTCTCTCTGATCCTGAAATGAAACCTCAAATTGGGNGTCAAAAAAAAAAAAAAAAAA]




>consensus_3942#0
ACCACCTCGCTCTTTGCATTTCTTGATTTCTCCTCGATCACCTAGTAGTTGATCGAGCAA
TGGCGGCCAAGGTGCACCCCAACCTGGCCGTGCCGTCGCTGATCCAGCCGCCGATGGCGC
CACCGGCGGCGATGGCGGCGGGGGACAGCGTGATGAAGACGAAGGCGGCGGCGGCGGGCG
GGGATGTGGTGCTGACGGTGTGGAGGAAGTCGCTACTGTTCAACTGCAGGGGGTTCACGG
TGTTCGACGCGAGCGGCGACCTGGTGTACCGGGTGGACAGCTACGCGGCGGACTCGCGCG
CGGAGGTGGTGCTCATGGACGCCGCGGGCGTGCCCGTGCTCACCGTCCGCCGCAAGAAGG
CGATCGGCAGCCAGCTCGGGCTTGGGGGCGACCAGTGGCTGGTCCACCCCGGGGAGGAGA
CCCGCCTCCCGCCGCTCTACGCCGTGAAGCGGACGCCGCAGTACGTCCGCGGCGGCGGCA
GCGTCAAGACCATGGCGCACGTCGCGCCCTGCGGCGTCGCCCTCGGCGCCGGCGGCGGCG
GTGGCTACGAGATCGAAGGCTCGTACCTGCGGCGGAGCTGCGCGGTGTACGACGCGCGGC
GGCGCGCGGTGGTGGCGGAGGTGCAGGCGAAGGAGGCGGTGGGGACGGACGTGTTCCGGC
TGGTGGTGCGGCCGGGGATGGAGGTGTCGGTGGCCATGGCCGTCGTGCTGGCGCTGGAGC
AGATGTTCGGCAAGCCCTCCCTGCTCAGGAGCTGGTCCTCCTAATAATTAGCCTGTTTCT
TTCTTTCTCTTTTTTTTTCTTTTTTTTTTTGGCCTTGAATTTCCAACATTGTTTGGGCCT
GAGAGCAGAAGAGTTGCTCTTGGCTGCCTCTTTCTCTCTGATCCTGAAATGAAACCTCAA
ATTGGGTGTCAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case