These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3948#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1528 fasta sequence [TTTGCTTTCCAAGAAAGCCATGAAAGGGTGGTGCTAGTGAGCCAGTAATAGCATTACCGTACTTCCACATGTCGCCGGCGAGAGGTGGCACGCCGGAGGAGGAGGGCGGTGGCGCCGACGTCGAGAAGGCGGCGGCGGAGACGGGAGGTAGAGGCACGTGGAGGCACGCGGCGTTCCACGTGGCGACGACGATCGCCACGCCGGCGGCCTATGCTCCCCTCCCGTTTGCTCTTGCCTCCCTTGGCTGGCCTCTTGGTGTTTGTAGCTTGGTCACAGGAACACTAGTTACATGGTGTTCTAGCCTGGTTGTTGCCTCACTGTGGCAGTGGAATGGAGACAAGCACACCAGCTACAAGCTTCTTGCAAAGAGCATCTTTGGTCCCTGGGGTTACTGGTATGTGTCGTTCTTCCAGCAAGTGGCATCAATTGGAAACAACATTGCAATCCAGATTGCAGCTGGGAGCAGCCTCAAGGCTGTGTACAAGCACTACCACACCACTGATGATGGCGCCATGACCCTGCAACAGTTCATCATTCTCTTCGGCGCATTCGAGCTGTTACTCTCCCAGCTTCCTGACATCCACTCACTCCGGTGGGTCAATGCTGCCTGCACCGCTAGCACCATTGGATTTGCAGGGACAGCCATTGGTGTCACCATTTATGATGGGCATCGGATTGATCGGAAGGAAGTTGATTACAGTCTGCAAGGAAGCGCTGCATCAAAGATCTTCAGAGCCTTCAATGCACTGGGCACAATAGCATTCTCATTTGGGGATGCAATGCTGCCAGAAATTCAGAGCTCTGTGCGAGAACCGGTGAGGATGAACATGTACAAAGGCGTGTCGACGGCGTACTCGATCATCGTCATGTCCTACTGGACCCTGGCATTCAGTGGGTACTGGGCATTTGGCTCAGGAGTACAGCCCTACATCCTGTCCTCCCTGACTTTTCCAAGATGGACAATTGTGATGGCAAATCTATTTGCAGTCATTCAGATCACTGGTTGCTTTCAGATATACTGCAGGCCGACATTCGCGCAATTTGAACAGCGGATTCAGGCGAAAGACGCAGG-CTACAGAGCAAGGATGTGGAGGCTGGTGTATACCTCTGCATACATGGTGGTGATCACCCTCATCTCTGCAGCAATGCCATTCTTTGGGGACTTTGTGTCAGTCTGTGGAGCTGTTGGCTTTACCCCTCTGGACTTTGTGC-TACCTGCACTGGCATTTCTGAAGGCCGGGAAGTTACCTGAAAACCCAGGATTACGCCATGCTGTGAAGGTGATCACCTCTGCTGTCGC-TGTCTTGTTCT-CCATTGTCGGAGCTCTGGCATGCATCGGCGCCGTCAGAGCGATCGCACTTGATGTC-AAAACCTACAAATTCTTCCATGACATGTGAATGCAGTTAGTTAGTATCATGTTGGTGATGAAATGAATGTCTCTG-CCATCTGTGCCAGTGGTTTATACCTGGTGATCTGACATGTGCTAAGTATTAAGTATATTTATGATTTGGAATAGCGGCAACAGTTG] [+] EMBL AK119782 [TTTGCTTTCCAAGAAAGCCATGAAAGGGTGGTGCTAGTGAGCCAGTAATAGCATTACCGTACTTCCACATGTCGCCGGCGAGAGGTGGCACGCCGGAGGAGGAGGGCGGTGGCGCCGACGTCGAGAAGGCGGCGGCGGAGACGGGAGGTAGAGGCACGTGGAGGCACGCGGCGTTCCACGTGGCGACGACGATCGCCACGCCGGCGGCCTATGCTCCCCTCCCGTTTGCTCTTGCCTCCCTTGGCTGGCCTCTTGGTGTTTGTAGCTTGGTCACAGGAACACTAGTTACATGGTGTTCTAGCCTGGTTGTTGCCTCACTGTGGCAGTGGAATGGAGACAAGCACACCAGCTACAAGCTTCTTGCAAAGAGCATCTTTGGTCCCTGGGGTTACTGGTATGTGTCGTTCTTCCAGCAAGTGGCATCAATTGGAAACAACATTGCAATCCAGATTGCAGCTGGGAGCAGCCTCAAGGCTGTGTACAAGCACTACCACACCACTGATGATGGCGCCATGACCCTGCAACAGTTCATCATTCTCTTCGGCGCATTCGAGCTGTTACTCTCCCAGCTTCCTGACATCCACTCACTCCGGTGGGTCAATGCTGCCTGCACCGCTAGCACCATTGGATTTGCAGGGACAGCCATTGGTGTCACCATTTATGATGGGCATCGGATTGATCGGAAGGAAGTTGATTACAGTCTGCAAGGAAGCGCTGCATCAAAGATCTTCAGAGCCTTCAATGCACTGGGCACAATAGCATTCTCATTTGGGGATGCAATGCTGCCAGAAATTCAGAGCTCTGTGCGAGAACCGGTGAGGATGAACATGTACAAAGGCGTGTCGACGGCGTACTCGATCATCGTCATGTCCTACTGGACCCTGGCATTCAGTGGGTACTGGGCATTTGGCTCAGGAGTACAGCCCTACATCCTGTCCTCCCTGACTTTTCCAAGATGGACAATTGTGATGGCAAATCTATTTGCAGTCATTCAGATCACTGGTTGCTTTCAGATATACTGCAGGCCGACATTCGCGCAATTTGAACAGCGGATTCAGGCGAAAGACGCAGG CTACAGAGCAAGGATGTGGAGGCTGGTGTATACCTCTGCATACATGGTGGTGATCACCCTCATCTCTGCAGCAATGCCATTCTTTGGGGACTTTGTGTCAGTCTGTGGAGCTGTTGGCTTTACCCCTCTGGACTTTGTGC TACCTGCACTGGCATTTCTGAAGGCCGGGAAGTTACCTGAAAACCCAGGATTACGCCATGCTGTGAAGGTGATCACCTCTGCTGTCGC TGTCTTGTTCT CCATTGTCGGAGCTCTGGCATGCATCGGCGCCGTCAGAGCGATCGCACTTGATGTC AAAACCTACAAATTCTTCCATGACATGTGAATGCAGTTAGTTAGTATCATGTTGGTGATGAAATGAATGTCTCTG CCATCTGTGCCAGTGGTTTATACCTGGTGATCTGACATGTGCTAAGTATTAAGTATATTTATGATTTGGAATAGCGGCAACAGTTG] [+] EMBL AK064079 [ TGGTGCTAGTGAGCCAGTAATAGCATTACCGTACTTCCACATGTCGCCGGCGAGAGGTGGCACGCCGGAGGAGGAGGGCGGTGGCGCCGACGTCGAGAAGGCGGCGGCGGAGACGGGAGGTAGAGGCACGTGGAGGCACGCGGCGTTCCACGTGGCGACGACGATCGCCACGCCGGCGGCCTATGCTCCCCTCCCGTTTGCTCTTGCCTCCCTTGGCTGGCCTCTTGGTGTTTGTAGCTTGGTCACAGGAACACTAGTTACATGGTGTTCTAGCCTGGTTGTTGCCTCACTGTGGCAGTGGAATGGAGACAAGCACACCAGCTACAAGCTTCTTGCAAAGAGCATCTTTGGTCCCTGGGGTTACTGGTATGTGTCGTTCTTCCAGCAAGTGGCATCAATTGGAAACAACATTGCAATCCAGATTGCAGCTGGGAGCAGCCTCAAGGCTGTGTACAAGCACTACCACACCACTGATGATGGCGCCATGACCCTGCAACAGTTCATCATTCTCTTCGGCGCATTCGAGCTGTTACTCTCCCAGCTTCCTGACATCCACTCACTCCGGTGGGTCAATGCTGCCTGCACCGCTAGCACCATTGGATTTGCAGGGACAGCCATTGGTGTCACCATTTATGATGGGCATCGGATTGATCGGAAGGAAGTTGATTACAGTCTGCAAGGAAGCGCTGCATCAAAGATCTTCAGAGCCTTCAATGCACTGGGCACAATAGCATTCTCATTTGGGGATGCAATGCTGCCAGAAATTCAGAGCTCTGTGCGAGAACCGGTGAGGATGAACATGTACAAAGGCGTGTCGACGGCGTACTCGATCATCGTCATGTCCTACTGGACCCTGGCATTCAGTGGGTACTGGGCATTTGGCTCAGGAGTACAGCCCTACATCCTGTCCTCCCTGACTTTTCCAAGATGGACAATTGTGATGGCAAATCTATTTGCAGTCATTCAGATCACTGGTTGCTTTCAGATATACTGCAGGCCGACATTCGCGCAATTTGAACAGCGGATTCAGGCGAAAGACGCAGG CTACAGAGCAAGGATGTGGAGGCTGGTGTATACCTCTGCATACATGGTGGTGATCACCCTCATCTCTGCAGCAATGCTATTCTTTGGGGACTTTGTGTCAGTCTGTGGAGCTGTTGGCTTTACCCCTCTGGACTTTGTGC TACCTGCACTGGCATTTCTGAAGGCCGGGAAGTTACCTGAAAACCCAGGATTACGCCATGCTGTGAAGGTGATCACCTCTGCTGTCGC TGTCTTGTTCT CCATTGTCGGAGCTCTGGCATGCATCGGCGCCGTCAGAGCGATCGCACTTGATGTC AAAACCTACAAATTCTTCCATGACATGTGAATGCAGTTAGTTAGTATCATGTTGGTGATGAAATGAATGTCTCTG CCATCTGTGCC ] [+] EMBL BQ908080 [ TTCAGGCGTAAGACGCAGGTCTACAGAGCAAGGATGTGGAGGCTGGTGTATACCTCTGCATACATGGTGGTGATCACCCTCATCTCTGCAGCAATGCCATTCTTTGGGGACTTTGTGTCAGTCTGTGGAGCTGTTGGCTTTACCCCTCTGGACTTTGTGCNTACCTGCACTGNCATTTCTGAA GCCGGGAAGTTACCTGTAAACCCAGGATTACGCCATGCTGTGAAGGTGATCACCTCCGCTGTCACATGTCTTGTTCTCCCATTGTCGGAGCTCTGGCATGCATCGGCGCCGTCAGAGCGATCGCACTTGATGTCTATAACCTACAAATTCTTCCATGACATGTGAAT CAGTTAGTTAGTATCATGTTGGTGATGAAATGAATTTGTCTGTCCATCTGT CCAGTGGTTTATAaaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||