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Oryza sativa
cluster # 3950 cluster # 3950       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3950#0 length = 2273 sequences # 3  

consensusID : consensus_3950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2273
fasta sequence
                              [CAAAGTGATTTTATTATTATTAGCAGAGCAGAGCAGATCAAGAAAGCAGAGAGAGGTGCCACACTCTTGTATTCACCGACAACTCACTCTGGGCATGGGCATGGCGGATTCACATCTGGATGGGGTGCCGGCGATGAGGAAGACGACGGTCTCCAGCTCCAGCAGCCTCAACATCGCCTTCCTACTCTCCATGGTTGCCACCAACCTGCTGTCCCTCTACCACCTCTCCACCCGCGCATCCACCGCACCGCCGCTCCTCTTGCCGGCGGCGCACCAGGCCCAGGCCCAGGACGAGCAGCTCCTCCGCCAGCTGACCGCCATCCGCGCCACCGTCTCCCAACTCAACCACCTCCGCTCCTCCACGCCCCCGCCTCCGCCGCCGCCACCGGAGCTCCTCCTCTACTCCCGCCTGGCGCCCCTCGCCTCCGCCTGCTCAGCCCACCCGGACCTCCTCCACCGATTCATGTCCTACACGCCCTTCTCCCCCTGCCCCGACGACGCCCTCTCCCTCGCCGAGCCCCTCCTCCTCCGCGGCTGCCACCCGCTGCCCAGGCGAAGGTGCTTCTCATCATCTTCGATCTCGTCTTCTCACAACCTGAATAATCTGCCCACCGATCCCTTCTCCCCGCTCCCGGACTCCGCCGTCCGCTGGCCTCCGGGGGCCAAATGCACCTCCTTCTCCTGCCTCCCGCCCTCGCTCGGCTTCGACCTCGCGCGCACGGAGGCCGCGCGCTTCCTGCGGGCGGAGGGGCCCCTCGACCTCACGGTGCCGCAGCTGCTGCGCCTGGCATCGCTCAGCCGCGCGGGGCCCATCCGGCTGGGGCTGGACGTGGGCGGCGGGACGGGGACGCTGGCGGCGCGCCTCAAGCGGGCGGCCAACGCCACCGTGCTCACCACCACTATGAACCTCGGGGCGCCCTACTCGGAGGCGGCGGCGGCGCGCGGGGTGGTGCCGCTGCACGCGCCGCTGCAGCAGCGCTTCCCGGTGGGGGACGCCACCATGGACCTGGTGCGGGCGGGGCACGCCGTGAACCGCTGGATCCCGGAGGCGGCGCTGGAGTTCCTGTGGTACGACGCGGACAGGGTGCTGCGCCCCCGCGGCCTGCTCTGGGTCGACCACTTCTGGTGCCGCCGCCCTGACCTCGCCGCCGTCTACCAACCCATGCTGCGCCGCCTCGGCTACAAGACCCTCAAGTGGGCCGTCGCCGACAAGACCACACCCACGCCCACGGCGCCACCCGGAGCCAAGCATGACCACGTCTACCTCACCGCCCTGCTGCAGAAGCCCTGATCGATTCATTGCCATTGCCATTGTAGGTGGGATCCTGGAACAAGGCTGTCACTGAGGTGATCAATTTAATTGTGCAATAAGCTCAAAGAGGAATGCCAATGCCAAGGCTCAACAATGAGGATGATGCACTGATTTGATTTGGGGGTCTTTTTTTTACCAAGGACTGTACGTAACTTCTCTGTGGAATCATCATTTTATAAGGAAAGCCTCGCATCTGCAAAAGAATGCAAATCCCCTTCTCACTCAAATTTGCTTTGAAAGTTGACATCTTCCTGTGGCTTATGCTTCGGAATAACATCTTGATGAAGGACAACTTCATCAGGAGAGGGTGGAAAGAAAAATTAGAGAGGTCAACTCTACACCGCAGATGAGATAGTGCCGCATTTTTGTTTACAAAATGCACACTGCCTCGATTTGTTTCGAGTGTAGCACCTTCAATTTTAGGAGTGAGCTCATAATATTCCTCACTTGTTTGGGAAAGGAGGATATGAGGAATTTGATTGCTCTAGGAGTAACTGATGTGGTGTGGTCGATTTTGATAGGAAATTGCTATGCATACAGCTCAATTGTCCGACTCATGTACGACTAAATTTGATCAACGGTTGTAAATGGCTGCAGGCGCATATGAACATACTTTCATTTGATTGATCTGTGGTTGTATATCTCTAGTTGTACATGAGTTGTATAACTAGGTTCTACTTATAGCAGTACTCATTTGGAGAACTTGGAATGAAGCTTCGTTGCTGGATTCCCTCGCACTCTCAGAGATCATCAATGGAAAGCTGCATGTTTATATGTTAGGTTCTGCTACAGTAAGGAACCAGCGAGTCTTCCATCACAACAAAATTCCCAACGACAACTTGGGCGCGGGCGGAAGTGAAAAGACTCGTGAAAATGTTAACCTAGTTCCTGTGAAACTCCTTTTCTTTTTCTTCTCACACTCCTTGTAAATACTTTTAGTGCCACTATAAACAGTGAAATT]

[-] EMBL AK071802             [CAAAGTGATTTTATTATTATTAGCAGAGCAGAGCAGATCAAGAAAGCAGAGAGAGGTGCCACACTCTTGTATTCACCGACAACTCACTCTGGGCATGGGCATGGCGGATTCACATCTGGATGGGGTGCCGGCGATGAGGAAGACGACGGTCTCCAGCTCCAGCAGCCTCAACATCGCCTTCCTACTCTCCATGGTTGCCACCAACCTGCTGTCCCTCTACCACCTCTCCACCCGCGCATCCACCGCACCGCCGCTCCTCTTGCCGGCGGCGCACCAGGCCCAGGCCCAGGACGAGCAGCTCCTCCGCCAGCTGACCGCCATCCGCGCCACCGTCTCCCAACTCAACCACCTCCGCTCCTCCACGCCCCCGCCTCCGCCGCCGCCACCGGAGCTCCTCCTCTACTCCCGCCTGGCGCCCCTCGCCTCCGCCTGCTCAGCCCACCCGGACCTCCTCCACCGATTCATGTCCTACACGCCCTTCTCCCCCTGCCCCGACGACGCCCTCTCCCTCGCCGAGCCCCTCCTCCTCCGCGGCTGCCACCCGCTGCCCAGGCGAAGGTGCTTCTCATCATCTTCGATCTCGTCTTCTCACAACCTGAATAATCTGCCCACCGATCCCTTCTCCCCGCTCCCGGACTCCGCCGTCCGCTGGCCTCCGGGGGCCAAATGCACCTCCTTCTCCTGCCTCCCGCCCTCGCTCGGCTTCGACCTCGCGCGCACGGAGGCCGCGCGCTTCCTGCGGGCGGAGGGGCCCCTCGACCTCACGGTGCCGCAGCTGCTGCGCCTGGCATCGCTCAGCCGCGCGGGGCCCATCCGGCTGGGGCTGGACGTGGGCGGCGGGACGGGGACGCTGGCGGCGCGCCTCAAGCGGGCGGCCAACGCCACCGTGCTCACCACCACTATGAACCTCGGGGCGCCCTACTCGGAGGCGGCGGCGGCGCGCGGGGTGGTGCCGCTGCACGCGCCGCTGCAGCAGCGCTTCCCGGTGGGGGACGCCACCATGGACCTGGTGCGGGCGGGGCACGCCGTGAACCGCTGGATCCCGGAGGCGGCGCTGGAGTTCCTGTGGTACGACGCGGACAGGGTGCTGCGCCCCCGCGGCCTGCTCTGGGTCGACCACTTCTGGTGCCGCCGCCCTGACCTCGCCGCCGTCTACCAACCCATGCTGCGCCGCCTCGGCTACAAGACCCTCAAGTGGGCCGTCGCCGACAAGACCACACCCACGCCCACGGCGCCACCCGGAGCCAAGCATGACCACGTCTACCTCACCGCCCTGCTGCAGAAGCCCTGATCGATTCATTGCCATTGCCATTGTAGGTGGGATCCTGGAACAAGGCTGTCACTGAGGTGATCAATTTAATTGTGCAATAAGCTCAAAGAGGAATGCCAATGCCAAGGCTCAACAATGAGGATGATGCACTGATTTGATTTGGGGGTCTTTTTTTTACCAAGGACTGTACGTAACTTCTCTGTGGAATCATCATTTTATAAGGAAAGCCTCGCATCTGCAAAAGAATGCAAATCCCCTTCTCACTCAAATTTGCTTTGAAAGTTGACATCTTCCTGTGGCTTATGCTTCGGAATAACATCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK107128             [                                                                             GACAACTCACTCTGGGCATGGGCATGGCGGATTCACATCTGGATGGGGTGCCGGCGATGAGGAAGACGACGGTCTCCAGCTCCAGCAGCCTCAACATCGCCTTCCTACTCTCCATGGTTGCCACCAACCTGCTGTCCCTCTACCACCTCTCCACCCGCGCATCCACCGCACCGCCGCTCCTCTTGCCGGCGGCGCACCAGGCCCAGGCCCAGGACGAGCAGCTCCTCCGCCAGCTGACCGCCATCCGCGCCACCGTCTCCCAACTCAACCACCTCCGCTCCTCCACGCCCCCGCCTCCGCCGCCGCCACCGGAGCTCCTCCTCTACTCCCGCCTGGCGCCCCTCGCCTCCGCCTGCTCAGCCCACCCGGACCTCCTCCACCGATTCATGTCCTACACGCCCTTCTCCCCCTGCCCCGACGACGCCCTCTCCCTCGCCGAGCCCCTCCTCCTCCGCGGCTGCCACCCGCTGCCCAGGCGAAGGTGCTTCTCATCATCTTCGATCTCGTCTTCTCACAACCTGAATAATCTGCCCACCGATCCCTTCTCCCCGCTCCCGGACTCCGCCGTCCGCTGGCCTCCGGGGGCCAAATGCACCTCCTTCTCCTGCCTCCCGCCCTCGCTCGGCTTCGACCTCGCGCGCACGGAGGCCGCGCGCTTCCTGCGGGCGGAGGGGCCCCTCGACCTCACGGTGCCGCAGCTGCTGCGCCTGGCATCGCTCAGCCGCGCGGGGCCCATCCGGCTGGGGCTGGACGTGGGCGGCGGGACGGGGACGCTGGCGGCGCGCCTCAAGCGGGCGGCCAACGCCACCGTGCTCACCACCACTATGAACCTCGGGGCGCCCTACTCGGAGGCGGCGGCGGCGCGCGGGGTGGTGCCGCTGCACGCGCCGCTGCAGCAGCGCTTCCCGGTGGGGGACGCCACCATGGACCTGGTGCGGGCGGGGCACGCCGTGAACCGCTGGATCCCGGAGGCGGCGCTGGAGTTCCTGTGGTACGACGCGGACAGGGTGCTGCGCCCCCGCGGCCTGCTCTGGGTCGACCACTTCTGGTGCCGCCGCCCTGACCTCGCCGCCGTCTACCAACCCATGCTGCGCCGCCTCGGCTACAAGACCCTCAAGTGGGCCGTCGCCGACAAGACCACACCCACGCCCACGGCGCCACCCGGAGCCAAGCATGACCACGTCTACCTCACCGCCCTGCTGCAGAAGCCCTGATCGATTCATTGCCATTGCCATTGTAGGTGGGATCCTGGAACAAGGCTGTCACTGAGGTGATCAATTTAATTGTGCAATAAGCTCAAAGAGGAATGCCAATGCCAAGGCTCAACAATGAGGATGATGCACTGATTTGATTTGGGGGTCTTTTTTTTACCAAGGACTGTACGTAACTTCTCTGTGGAATCATCATTTTATAAGGAAAGCCTCGCATCTGCAAAAGAATGCAAATCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK119822             [                                                                                                             TCACATCTGGATGGGGTGCCGGCGATGAGGAAGACGACGGTCTCCAGCTCCAGCAGCCTCAACATCGCCTTCCTACTCTCCATGGTTGCCACCAACCTGCTGTCCCTCTACCACCTCTCCACCCGCGCATCCACCGCACCGCCGCTCCTCTTGCCGGCGGCGCACCAGGCCCAGGCCCAGGACGAGCAGCTCCTCCGTCAGCTGACCGCCATCCGCGCCACCGTCTCCCAACTCAACCACCTCCGCTCCTCCACGCCCCCGCCTCCGCCGCCGCCACCGGAGCTCCTCCTCTACTCCCGCCTGGCGCCCCTCGCCTCCGCCTGCTCAGCCCACCCGGACCTCCTCCACCGATTCATGTCCTACACGCCCTTCTCCCCCTGCCCCGACGACGCCCTCTCCCTCGCCGAGCCCCTCCTCCTCCGCGGCTGCCACCCGCTGCCCAGGCGAAGGTGCTTCTCATCATCTTCGATCTCGTCTTCTCACAACCTGAATAATCTGCCCACCGATCCCTCCTCCCCGCTCCCGGACTCCGCCGTCCGCTGGCCTCCGGGGGCCAAATGCACCTCCTTCTCCTGCCTCCCGCCCTCGCTCGGCTTCGACCTCGCGCGCACGGAGGCCGCGCGCTTCCTGCGGGCGGAGGGGCCCCTCGACCTCACGGTGCCGCAGCTGCTGCGCCTGGCATCGCTCAGCCGCGCGGGGCCCATCCGGCTGGGGCTGGACGTGGGCGGCGGGACGGGGACGCTGGCGGCGCGCCTCAAGCGGGCGGCCAACGCCACCGTGCTCACCACCACTATGAACCTCGGGGCGCCCTACTCGGAGGCGGCGGCGGCGCGCGGGGTGGTGCCGCTGCACGCGCCGCTGCAGCAGCGCTTCCCGGTGGGGGACGCCACCATGGACCTGGTGCGGGCGGGGCACGCCGTGAACCGCTGGATCCCGGAGGCGGCGCTGGAGTTCCTGTGGTACGACGCGGACAGGGTGCTGCGCCCCCGCGGCCTGCTCTGGGTCGACCACTTCTGGTGCCGCCGCCCTGACCTCGCCGCCGTCTACCAACCCATGCTGCGCCGCCTCGGCTACAAGACCCTCAAGTGGGCCGTCGCCGACAAGACCACACCCACGCCCACGGCGCCACCCGGAGCCAAGCATGACCACGTCTACCTCACCGCCCTGCTGCAGAAGCCCTGATCGATTCATTGCCATTGCCATTGTAGGTGGGATCCTGGAACAAGGCTGTCACTGAGGTGATCAATTTAATTGTGCAATAAGCTCAAAGAGGAATGCCAATGCCAAGGCTCAACAATGAGGATGATGCACTGATTTGATTTGGGGGTCTTTTTTTTACCAAGGGCTGTACGTAACTTCTCTGTGGAATCATCATTTTATAAGGAAAGCCTCGCATCTGCAAAAGAATGCAAATCCCCTTCTCACTCAAATTTGCTTTGAAAGTTGACATCTTCCTGTGGCTTATGCTTCGGAATAACATCTTGATGAAGGACAACTTCATCAGGAGAGGGTGGAAAGAAAAATTAGAGAGGTCAACTCTACACCGCAGATGAGATAGTGCCGCATTTTTGTTTACAAAATGCACACTGCCTCGATTTGTTTCGAGTGTAGCACCTTCAATTTTAGGAGTGAGCTCATAATATTCCTCACTTGTTTGGGAAAGGAGGATATGAGGAATTTGATTGCTCTAGGAGTAACTGATGTGGTGTGGTCGATTTTGATAGGAAATTGCTATGCATACAGCTCAATTGTCCGACTCATGTACGACTAAATTTGATCAACGGTTGTAAATGGCTGCAGGCGCATATGAACATACTTTCATTTGATTGATCTGTGGTTGTATATCTCTAGTTGTACATGAGTTGTATAACTAGGTTCTACTTATAGCAGTACTCATTTGGAGAACTTGGAATGAAGCTTCGTTGCTGGATTCCCTCGCACTCTCAGAGATCATCAATGGAAAGCTGCATGTTTATATGTTAGGTTCTGCTACAGTAAGGAACCAGCGAGTCTTCCATCACAACAAAATTCCCAACGACAACTTGGGCGCGGGCGGAAGTGAAAAGACTCGTGAAAATGTTAACCTAGTTCCTGTGAAACTCCTTTTCTTTTTCTTCTCACACTCCTTGTAAATACTTTTAGTGCCACTATAAACAGTGAAATT]


>consensus_3950#0 CAAAGTGATTTTATTATTATTAGCAGAGCAGAGCAGATCAAGAAAGCAGAGAGAGGTGCC ACACTCTTGTATTCACCGACAACTCACTCTGGGCATGGGCATGGCGGATTCACATCTGGA TGGGGTGCCGGCGATGAGGAAGACGACGGTCTCCAGCTCCAGCAGCCTCAACATCGCCTT CCTACTCTCCATGGTTGCCACCAACCTGCTGTCCCTCTACCACCTCTCCACCCGCGCATC CACCGCACCGCCGCTCCTCTTGCCGGCGGCGCACCAGGCCCAGGCCCAGGACGAGCAGCT CCTCCGCCAGCTGACCGCCATCCGCGCCACCGTCTCCCAACTCAACCACCTCCGCTCCTC CACGCCCCCGCCTCCGCCGCCGCCACCGGAGCTCCTCCTCTACTCCCGCCTGGCGCCCCT CGCCTCCGCCTGCTCAGCCCACCCGGACCTCCTCCACCGATTCATGTCCTACACGCCCTT CTCCCCCTGCCCCGACGACGCCCTCTCCCTCGCCGAGCCCCTCCTCCTCCGCGGCTGCCA CCCGCTGCCCAGGCGAAGGTGCTTCTCATCATCTTCGATCTCGTCTTCTCACAACCTGAA TAATCTGCCCACCGATCCCTTCTCCCCGCTCCCGGACTCCGCCGTCCGCTGGCCTCCGGG GGCCAAATGCACCTCCTTCTCCTGCCTCCCGCCCTCGCTCGGCTTCGACCTCGCGCGCAC GGAGGCCGCGCGCTTCCTGCGGGCGGAGGGGCCCCTCGACCTCACGGTGCCGCAGCTGCT GCGCCTGGCATCGCTCAGCCGCGCGGGGCCCATCCGGCTGGGGCTGGACGTGGGCGGCGG GACGGGGACGCTGGCGGCGCGCCTCAAGCGGGCGGCCAACGCCACCGTGCTCACCACCAC TATGAACCTCGGGGCGCCCTACTCGGAGGCGGCGGCGGCGCGCGGGGTGGTGCCGCTGCA CGCGCCGCTGCAGCAGCGCTTCCCGGTGGGGGACGCCACCATGGACCTGGTGCGGGCGGG GCACGCCGTGAACCGCTGGATCCCGGAGGCGGCGCTGGAGTTCCTGTGGTACGACGCGGA CAGGGTGCTGCGCCCCCGCGGCCTGCTCTGGGTCGACCACTTCTGGTGCCGCCGCCCTGA CCTCGCCGCCGTCTACCAACCCATGCTGCGCCGCCTCGGCTACAAGACCCTCAAGTGGGC CGTCGCCGACAAGACCACACCCACGCCCACGGCGCCACCCGGAGCCAAGCATGACCACGT CTACCTCACCGCCCTGCTGCAGAAGCCCTGATCGATTCATTGCCATTGCCATTGTAGGTG GGATCCTGGAACAAGGCTGTCACTGAGGTGATCAATTTAATTGTGCAATAAGCTCAAAGA GGAATGCCAATGCCAAGGCTCAACAATGAGGATGATGCACTGATTTGATTTGGGGGTCTT TTTTTTACCAAGGACTGTACGTAACTTCTCTGTGGAATCATCATTTTATAAGGAAAGCCT CGCATCTGCAAAAGAATGCAAATCCCCTTCTCACTCAAATTTGCTTTGAAAGTTGACATC TTCCTGTGGCTTATGCTTCGGAATAACATCTTGATGAAGGACAACTTCATCAGGAGAGGG TGGAAAGAAAAATTAGAGAGGTCAACTCTACACCGCAGATGAGATAGTGCCGCATTTTTG TTTACAAAATGCACACTGCCTCGATTTGTTTCGAGTGTAGCACCTTCAATTTTAGGAGTG AGCTCATAATATTCCTCACTTGTTTGGGAAAGGAGGATATGAGGAATTTGATTGCTCTAG GAGTAACTGATGTGGTGTGGTCGATTTTGATAGGAAATTGCTATGCATACAGCTCAATTG TCCGACTCATGTACGACTAAATTTGATCAACGGTTGTAAATGGCTGCAGGCGCATATGAA CATACTTTCATTTGATTGATCTGTGGTTGTATATCTCTAGTTGTACATGAGTTGTATAAC TAGGTTCTACTTATAGCAGTACTCATTTGGAGAACTTGGAATGAAGCTTCGTTGCTGGAT TCCCTCGCACTCTCAGAGATCATCAATGGAAAGCTGCATGTTTATATGTTAGGTTCTGCT ACAGTAAGGAACCAGCGAGTCTTCCATCACAACAAAATTCCCAACGACAACTTGGGCGCG GGCGGAAGTGAAAAGACTCGTGAAAATGTTAACCTAGTTCCTGTGAAACTCCTTTTCTTT TTCTTCTCACACTCCTTGTAAATACTTTTAGTGCCACTATAAACAGTGAAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)