cluster # 3958

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Oryza sativa
cluster # 3958 cluster # 3958 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3958#0 length = 707 sequences # 3

consensusID : consensus_3958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 707
fasta sequence

                              [CCTTGGACCAACCCCAACCCCAACCAAACCAAACCGTCGCGCGCGCCACTCGCTCTCCACCTCCCCGCGAGTGCGAGGCCATGAAGGGGAAGCGGGGCCGCGTGCGGCTCAACGTCGGAGGCCGGGTGTTCGAGACGATGGCCTCCACGCTCGCCAGCGCCGGCCGGGACACCATGCTCGGCGCCATGATCGACGCCTCCTGGAACCACGGCGGCGGCGGGGACGGCGACGGCGAGGGTGGCGCGGACGAGTACTTCATCGACCGTGACCCGGAGTGCTTCGCGGTGCTGCTCGACCTGCTCCGCACGGGGGGGCTCCACGTGCCGCCCCACGTCGCCGACGGGGTGCTCTGCCGCGAGGCGCTCTACTACGGTCTCCTCGACCGCGTCCGCGCCGCGCGGTGGGGGCCGTTCGACGGGGACCGGCTGCGGCTGGCGGCGTCCGTGGCCGGGAGCGCCGCGGGCGACGGGACGGCCGTCCGCGCCGCGCCCGACGGCGGCTGCTGCGTCGCGCACGGCGGCGCCGTGCGCGTGTACAACTGGGTGATGGAGGAGCGCCGGGCCGTGCACCTCGACCACGCGCCGGTCAACGACGCGGCCTACCTCGACGAGGCCACGCTCCTCGTCGCCGCGCGGGAGAGGCCCGGCACCGGCAGGCGCGACGGCGGCGTGGCGGACTTCTCCGCGCTCACCGGCGACCTGCGCCAC]

[+] EMBL CB669135             [CCTTGGACCAACCCCAACCCCAACCAAACCAAACCGTCGCGCGCGCCACTCGCTCTCCACCTCCCCGCGAGTGCGAGGCCATGAAGGGGAAGCGGGGCCGCGTGCGGCTCAACGTCGGAGGCCGGGTGTTCGAGACGATGGCCTCCACGCTCGCCAGCGCCGGCCGGGACACCATGCTCGGCGCCATGATCGACGCCTCCTGGAACCACGGCGGCGGCGGGGACGGCGACGGCGAGGGTGGCGCGGACGAGTACTTCATCGACCGTGACCCGGAGTGCTTCGCGGTGCTGCTCGACCTGCTCCGCACGGGGGGGCTCCACGTGCCGCCCCACGTCGCCGACGGGGTGCTCTGCCGCGAGGCGCTCTACTACGGTCTCCTCGACCGCGTCCGCGCCGCGCGGTGGGGGCCGTTCGACGGGGACCGGCTGCGGCTGGCGGCGTCCGTGGCCGGGAGCGCCGCGGGCGACGGGACGGCCGTCCGCGCCGCGCCCGACGGCGGCTGCTGCGTCGCGCACGGCGGCGCCGTGCGCGTGTACAACTGGGTGATGGAGGAGCGCCGGGCCGTGCACCTCTACCACGCGCCGGTCAACGACGCGG                                                                                                              ]
[+] EMBL CB642409             [                                 CCGTCGCGCGCGCCACTCGCTCTCCACCTCCCCGCGAGTGCGAGGCCATGAAGGGGAAGCGGGGCCGCGTGCGGCTCAACGTCGGAGGCCGGGTGTTCGAGACGATGGCCTCCACGCTCGCCAGCGCCGGCCGGGACACCATGCTCGGCGCCATGATCGACGCCTCCTGGAACCACGGCGGCGGCGGGGACGGCGACGGCGAGGGTGGCGCGGACGAGTACTTCATCGACCGTGACCCGGAGTGCTTCGCGGTGCTGCTCGACCTGCTCCGCACGGGGGGGCTCCACGTGCCGCCCCACGTCGCCGACTAGGTGCTCTGCCGCGAGGCGCTCTACTACGGTCTCCTCGACCGCGTCCGCGCCGCGCGGTGGGGGCCGTTCGACGGGGACCGGCTGCGGCTGGCGGCGTCCGTGGCCGGGAGCGCCGCGGGCGACGGGACGGCCGTCCGCGCCGCGCCCGACGGCGGCTGCTGCGTCGCGCACGGCGGCGCCGTGCGCGTGTACAACTGGGTGATGGAGGAGCGCCGGGCCGTGCACCTCGACCACGCGCCGGTCAACGACGCGGCCTACCTCGACGAGGCCACGCTCCTCGTCGCCGCGCGGGAGAGGCCCGGCACCGGCAGGCGCGACGGCGGCGTGGCGGACTTCTCCGCGCTCACCGGCGACCTGCGCCAC]
[+] EMBL CB661877             [                                 CCGTCGCGCGCGCCACTCGCTCTCCACCTCCCCGCGAGTGCGAGGCCATGAAGGGGAAGCGGGGCCGCGTGCGGCTCAACGTCGGAGGCCGGGTGTTCGAGACGATGGCCTCCACGCTCGCCAGCGCCGGCCGGGACACCATGCTCGGCGCCATGATCGACGCCTCCTGGAACCACGGCGGCGGCGGGGACGGCGACGGCGAGGGTGGCGCGGACGAGTACTTCATCGACCGTGACCCGGAGTGCTTCGCGGTGCTGCTCGACCTGCTCCGCACGGGGGGGCTCCACGTGCCGCCCCACGTCGCCGACGGGGTGCTCTGCCGCGAGGCGCTCTACTACGGTCTCCTCGACCGCGTCCGCGCCGCGCGGTGGGGGCCGTTCGACGGGGACCGGCTGCGGCTGGCGGCGTCCGTGGCCGGGAGCGCCGCGGGCGACGGGACGGCCGTCCGCGCCGCGCCCGACGGCGGCTGCTGCGTCGCGCACGGCGGCGCCGTGCGCGTGTACAACTGGGTGATGGAGGAGCGCCGGGCCGTGCACCTCGACCACGCGCCGGTCAACGACGCGGCCTACCTCGACGAGGCCACGCTC                                                                                       ]




>consensus_3958#0
CCTTGGACCAACCCCAACCCCAACCAAACCAAACCGTCGCGCGCGCCACTCGCTCTCCAC
CTCCCCGCGAGTGCGAGGCCATGAAGGGGAAGCGGGGCCGCGTGCGGCTCAACGTCGGAG
GCCGGGTGTTCGAGACGATGGCCTCCACGCTCGCCAGCGCCGGCCGGGACACCATGCTCG
GCGCCATGATCGACGCCTCCTGGAACCACGGCGGCGGCGGGGACGGCGACGGCGAGGGTG
GCGCGGACGAGTACTTCATCGACCGTGACCCGGAGTGCTTCGCGGTGCTGCTCGACCTGC
TCCGCACGGGGGGGCTCCACGTGCCGCCCCACGTCGCCGACGGGGTGCTCTGCCGCGAGG
CGCTCTACTACGGTCTCCTCGACCGCGTCCGCGCCGCGCGGTGGGGGCCGTTCGACGGGG
ACCGGCTGCGGCTGGCGGCGTCCGTGGCCGGGAGCGCCGCGGGCGACGGGACGGCCGTCC
GCGCCGCGCCCGACGGCGGCTGCTGCGTCGCGCACGGCGGCGCCGTGCGCGTGTACAACT
GGGTGATGGAGGAGCGCCGGGCCGTGCACCTCGACCACGCGCCGGTCAACGACGCGGCCT
ACCTCGACGAGGCCACGCTCCTCGTCGCCGCGCGGGAGAGGCCCGGCACCGGCAGGCGCG
ACGGCGGCGTGGCGGACTTCTCCGCGCTCACCGGCGACCTGCGCCAC

clustalw multiple alignements is not computed in this case