cluster # 3964

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Oryza sativa
cluster # 3964 cluster # 3964 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3964#0 length = 840 sequences # 3

consensusID : consensus_3964#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 840
fasta sequence

                              [TTTAGTATCATTTGTAAGTACAAGAAACGAACAACTGATCATGCAATTAATGAATTTTGACGCTATATACACTGTGTGTGTATTCAGTATTCTTCATCAGTGATCTCTAGCTAAATCTCTATGAAATTTGTACAAAAATATGTATCAGTTACCACTATCCAACTTGTATTCTCTTCTTTCTTTCTATTCCTTTTCTGCCTTTGGTTTGGTGTTCCTGAGGGAAAAAAATGGTCAAATCAATTTTGGTTGGGCTTGGCAGTGACAGTGGCATTGGCAGAAGCGGAGCGAGTGGCGAGGCGGAGGCGGCCGGCGCGGCAGATCTCGGCGGGGGCGGGCGCGTCCCACCGCTCGGCGCGCGTCATGAGCGCCGCCACCTCCGCCACGCAATCGTCCGCGCCCATGGTCGCCACCCTCCGCCGCACCGCCGCCGCCTCCTCGCCGGCGACCTCGTCAAACAGCGCCTCCCACCCTTGCTCCCACGGCACGCTCGCGTCGCACATCTCCAGCGTCCCGTTCCGCCACTCCGTCCAGCTCCACCCGCGCACCAGCCGCGCCGCCGACGCGCACTCGCCGCCGCGGCACGCCGGCCGGCACGGCCGGCACTTGGCGCCGCTCAGCGGGCCGGGGCTCCCCAGCGACGCCACGGGCACGCCGTACGGCGCCGGCGGGAACGAGTACCTCCGGTCGCTCAGCACGCAGAACGGCAGCCGCCGCTCCCTCGCCTTGACGCCGGCCACCTTCAGCTGCGCCTGGAACGCCGCCTCCGAGTTGAGCTCCTGGTAGCCCGCGACGTCGAGGCGAGGGATCAGCGAGAGCCTGGACAGCGCGACGCGGGACGCG]

[-] EMBL AK107964             [TTTAGTATCATTTGTAAGTACAAGAAACGAACAACTGATCATGCAATTAATGAATTTTGACGCTATATACACTGTGTGTGTATTCAGTATTCTTCATCAGTGATCTCTAGCTAAATCTCTATGAAATTTGTACAAAAATATGTATCAGTTACCACTATCCAACTTGTATTCTCTTCTTTCTTTCTATTCCTTTTCTGCCTTTGGTTTGGTGTTCCTGAGGGAAAAAAATGGTCAAATCAATTTTGGTTGGGCTTGGCAGTGACAGTGGCATTGGCAGAAGCGGAGCGAGTGGCGAGGCGGAGGCGGCCGGCGCGGCAGATCTCGGCGGGGGCGGGCGCGTCCCACCGCTCGGCGCGCGTCATGAGCGCCGCCACCTCCGCCACGCAATCGTCCGCGCCCATGGTCGCCACCCTCCGCCGCACCGCCGCCGCCTCCTCGCCGGCGACCTCGTCAAACAGCGCCTCCCACCCTTGCTCCCACGGCACGCTCGCGTCGCACATCTCCAGCGTCCCGTTCCGCCACTCCGTCCAGCTCCACCCGCGCACTCGCCGCGGCGgc                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB643430             [                        AAACGAACAACTGATCATGCAATTAATGAATTTTGACGCTATATACACTGTGTGTGTATTCAGTATTCTTCATCAGTGATCTCTAGCTAAATCTCTATGAAATTTGTACAAAAATATGTATCAGTTACCACTATCCAACTTGTATTCTCTTCTTTCTTTCTATTCCTTTTCTGCCTTTGGTTTGGTGTTCCTGAGGGAAAAAAATGGTCAAATCAATTTTGGTTGGGCTTGGCAGTGACAGTGGCATTGGCAGAAGCGGAGCGAGTGGCGAGGCGGAGGCGGCCGGCGCGGCAGATCTCGGCGGGGGCGGGCGCGTCCCACCGCTCGGCGCGCGTCATGAGCGCCGCCACCTCCGCCACGCAATCGTCCGCGCCCATGGTCGCCACCCTCCGCCGCACCGCCGCCGCCTCCTCGCCGGCGACCTCGTCAAACAGCGCCTCCCACCCTTGCTCCCACGGCACGCTCGCGTCGCACATCTCCAGCGTCCCGTTCCGCCACTCCGTCCAGCTCCACCCGCGCACCAGCCGCGCCGCCGACGCGCACTCGCCGCCGCGGCACGCCGGCCGGCACGGCCGGCACTTGGCGCCGCTCAGCGGGCCGGGGCTCCCCAGCGACGCCACGGGCACGCCGTACGGCGCCGGCGGGAACGAGTACCTCCGGTCGCTCAGCACGCAGAACGGCAGCCGCCGCTCCCTCGCCTTGACGCCGGCCACCTTCAGCTGCG                                                                                            ]
[-] EMBL BI305265             [                                                                                                                                                                                                                                                                                                                                                                                                                             CCGCCGCACCGCCGCCGCCTCCTCGCCGGCGACCTCGTCAAACAGCGCCTCCCACCCTTGCTCCCACGGCACGCTCGCGTCGCACATCTCCAGCGTCCCGTTCCGCCACTCCGTCCAGCTCCACCCGCGCACCAGCCGCGCCGCCGACGCGCACTCGCCGCCGCGGCACGCCGGCCGGCACGGCCGGCACTTGGCGCCGCTCAGCGGGCCGGGGCTCCCCAGCGACGCCACGGGCACGCCGTACGGCGCCGGCGGGAACGAGTACCTCCGGTCGCTCAGCACGCAGAACGGCAGCCGCCGCTCCCTCGCCTTGACGCCGGCCACCTTCAGCTGCGCCTGGAACGCCGCCTCCGAGTTGAGCTCCTGGTAGCCCGCGACGTCGAGGCGAGGGATCAGCGAGAGCCTGGACAGCGCGACGCGGGACGCG]




>consensus_3964#0
TTTAGTATCATTTGTAAGTACAAGAAACGAACAACTGATCATGCAATTAATGAATTTTGA
CGCTATATACACTGTGTGTGTATTCAGTATTCTTCATCAGTGATCTCTAGCTAAATCTCT
ATGAAATTTGTACAAAAATATGTATCAGTTACCACTATCCAACTTGTATTCTCTTCTTTC
TTTCTATTCCTTTTCTGCCTTTGGTTTGGTGTTCCTGAGGGAAAAAAATGGTCAAATCAA
TTTTGGTTGGGCTTGGCAGTGACAGTGGCATTGGCAGAAGCGGAGCGAGTGGCGAGGCGG
AGGCGGCCGGCGCGGCAGATCTCGGCGGGGGCGGGCGCGTCCCACCGCTCGGCGCGCGTC
ATGAGCGCCGCCACCTCCGCCACGCAATCGTCCGCGCCCATGGTCGCCACCCTCCGCCGC
ACCGCCGCCGCCTCCTCGCCGGCGACCTCGTCAAACAGCGCCTCCCACCCTTGCTCCCAC
GGCACGCTCGCGTCGCACATCTCCAGCGTCCCGTTCCGCCACTCCGTCCAGCTCCACCCG
CGCACCAGCCGCGCCGCCGACGCGCACTCGCCGCCGCGGCACGCCGGCCGGCACGGCCGG
CACTTGGCGCCGCTCAGCGGGCCGGGGCTCCCCAGCGACGCCACGGGCACGCCGTACGGC
GCCGGCGGGAACGAGTACCTCCGGTCGCTCAGCACGCAGAACGGCAGCCGCCGCTCCCTC
GCCTTGACGCCGGCCACCTTCAGCTGCGCCTGGAACGCCGCCTCCGAGTTGAGCTCCTGG
TAGCCCGCGACGTCGAGGCGAGGGATCAGCGAGAGCCTGGACAGCGCGACGCGGGACGCG

clustalw multiple alignements is not computed in this case