|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3966#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1629 fasta sequence
[GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTCTCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCAGCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAATACTATATAATAGCACAGACTCTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCATAACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATTTGACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAAATTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACATACTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGACAGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCTAGGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCATTATGTTAGAAAAGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAACACAATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGAACGAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAGCCCGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGCTACAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTGCGTGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATGGTTAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCACCTCCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTATATCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTATATGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTGTACTACTTACC]
[+] EMBL AK109857 [GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTCTCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCAGCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAATACTATATAATAGCACAGACTCTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCATAACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATTTGACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAAATTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACATACTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGACAGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCTAGGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCATTATGTTAGAAAAGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAACACAATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGAACGAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAGCCCGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGCTACAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTGCGTGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATGGTTAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCACCTCCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTATATCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTATATGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTGTACTACTTACC]
consensusID : consensus_3966#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1461 fasta sequence
[GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCACCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCACAAATTAATTAAGCTGCTGAT]
[+] EMBL AK060992 [GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCACCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCACAAATTAATTAAGCTGCTGAT]
consensusID : consensus_3966#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 949 fasta sequence
[TGAGTGCGCAGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCTCCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACG]
[+] EMBL AK120038 [TGAGTGCGCAGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCTCCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3966#1 GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGG 60
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGG 60
consensus_3966#1 CGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAAC 120
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 CGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAAC 120
consensus_3966#1 AAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCG 180
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 AAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCG 180
consensus_3966#1 CATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGT 240
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 CATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGT 240
consensus_3966#1 GGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGAT 300
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 GGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGAT 300
consensus_3966#1 GGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCT 360
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 GGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCT 360
consensus_3966#1 AAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACC 420
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 AAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACC 420
consensus_3966#1 CACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCA-TCGTCCAGGGGCTTA--- 476
consensus_3966#2 ---------------------------------TGAGTGCG-CAGTCCAGGGGCTTA--- 23
consensus_3966#0 CACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTC 480
** * * ** * * * **
consensus_3966#1 ---------------ACGTGAAGCAGCTGATGCCTCCATACCTGG--GCGTGGAGCTGAG 519
consensus_3966#2 ---------------ACGTGAAGCAGCTGATGCCTCCATACCTGG--GCGTGGAGCTGAG 66
consensus_3966#0 TCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCA 540
** * ** * * * ** ** * ** ** *** *
consensus_3966#1 CCCGGAGGATCTCAAG-ACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGC 578
consensus_3966#2 CCCGGAGGATCTCAAG-ACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGACCCGC 125
consensus_3966#0 GCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAA-TACTATATAATAGCACAGAC 599
* * ** ** ** * * * ** * * ** ** *
consensus_3966#1 TGACGCCGGT-GATCGTGAGCGTG-ATAACC--CTGGACCAGCAGAT----CGAATACTT 630
consensus_3966#2 TGACGCCGGT-GATCGTGAGCGTG-ATAACC--CTGGACCAGCAGAT----CGAATACTT 177
consensus_3966#0 TCTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCA 659
* * * ** ** * ** ** *** ** ** * ***** *
consensus_3966#1 CCACGAGTACAGGAAGCG------GCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGC--- 681
consensus_3966#2 CCACGAGTACAGGAAGCG------GCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGC--- 228
consensus_3966#0 TAACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATT 719
**** *** * * ** ** * * ** * ** ** *
consensus_3966#1 -GAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCA-AC 739
consensus_3966#2 -GAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCA-AC 286
consensus_3966#0 TGACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAA 779
** * ** * * * * * * * * * * *
consensus_3966#1 ACCTACTTCACCACGCCCTTCCGG-AGCGTGGAGTACGACATCCCCTCCTACGTGGACCT 798
consensus_3966#2 ACCTACTTCACCACGCCCTTCCGG-AGCGTGGAGTACGACATCCCCTCCTACGTGGACCT 345
consensus_3966#0 ATTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACAT 839
* ***** * ** ** ** * ** * **** * * * ** *
consensus_3966#1 GCTCGT---CTCCGGGGCCG----CCAAGCTGCTGGACCAGGT-----GGCGGCGCTCGG 846
consensus_3966#2 GCTCGT---CTCCGGGGCCG----CCAAGCTGCTGGACCAGGT-----GGCGGCGCTCGG 393
consensus_3966#0 ACTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGA 899
*** * ** ** *** * ** * * * * ***
consensus_3966#1 GGCACGCCGGAT-CGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCC-----CTCCCA 900
consensus_3966#2 GGCACGCCGGAT-CGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCC-----CTCCCA 447
consensus_3966#0 CAGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCT 959
** * * ** * * *** * * * * ** ** **
consensus_3966#1 GAGGACGCTCGGCGG--GGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCC 958
consensus_3966#2 GAGGACGCTCGGCGG--GGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCC 505
consensus_3966#0 AGGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCA-TTATGTTAGA 1018
* * ** * * * ** ** * *** ** *
consensus_3966#1 AAGCTG--TTCAACTCCCG--GATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGC--C 1012
consensus_3966#2 AAGCTG--TTCAACTCCCG--GATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGC--C 559
consensus_3966#0 AAAGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAAC 1078
** ** ** * * * ** * **** * ** * * *** * *
consensus_3966#1 ACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGT-----CGAGA 1067
consensus_3966#2 ACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGT-----CGAGA 614
consensus_3966#0 ACAATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGA 1138
** * ** ** * * * * * * * ** * * * ****
consensus_3966#1 ACGGGGACAA----GTACGGCTTCACGGAGACCACGCGCGGCTGC-TGCGG-CACCGGCA 1121
consensus_3966#2 ACGGGGACAA----GTACGGCTTCACGGAGACCACGCGCGGCTGC-TGCGG-CACCGGCA 668
consensus_3966#0 ACGAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAG 1198
*** * * ** ** * **** * * *** *** * *
consensus_3966#1 CCATCGAGGTCACCGGACT----CTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTC 1177
consensus_3966#2 CCATCGAGGTCACCGGACT----CTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTC 724
consensus_3966#0 CCCGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGC 1258
** * ** *** * * * * * * *
consensus_3966#1 TCCAACCACGTCTTCTTCGA----CAGCTACCACCCTACGCA-GCGCGCCTA--CAAAAT 1230
consensus_3966#2 TCCAACCACGTCTTCTTCGA----CAGCTACCACCCTACGCA-GCGCGCCTA--CAAAAT 777
consensus_3966#0 TACAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTG 1318
* **** **** * * * ** * ** *** ** ** * *
consensus_3966#1 CATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCC 1290
consensus_3966#2 CATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCC 837
consensus_3966#0 CGTGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATG 1378
* * * * * * * * * * * * ** * ** *
consensus_3966#1 GCCCGCCAATCTGCCATTC--CTTCCTTCTTAATTAATCTGCAC-CTACCTACCTACCAC 1347
consensus_3966#2 GCCCGCCAATCTGCCATTC--CTTCCTTCTTAATTAATCTGCAC-CTACCTACCTACCAC 894
consensus_3966#0 GTTAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCAC 1438
* * ** * * ** * ** ** ** * * ** * ***
consensus_3966#1 CACCGCTCCATCCATTT-CTAT-----ATTATATATATTGATCAATCGACT-CGACTGTA 1400
consensus_3966#2 CTCCGCTCCATCCATTT-CTAT-----ATTATATATATTGATCAATCGACT-CGACTGTA 947
consensus_3966#0 CTCCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTA 1498
* *** ** *** ** * ** *** ** ** * *** *** * ****
consensus_3966#1 CGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCACAAATTAATTAAGCTGCTGA 1460
consensus_3966#2 CG---------------------------------------------------------- 949
consensus_3966#0 TATCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTA 1558
consensus_3966#1 T----------------------------------------------------------- 1461
consensus_3966#2 ------------------------------------------------------------
consensus_3966#0 TATGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTG 1618
consensus_3966#1 -----------
consensus_3966#2 -----------
consensus_3966#0 TACTACTTACC 1629
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||