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Oryza sativa
cluster # 3966 cluster # 3966       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3966#0 length = 1629 sequences # 1  
consensus_3966#1 length = 1461 sequences # 1  
consensus_3966#2 length = 949 sequences # 1  

consensusID : consensus_3966#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1629
fasta sequence
                              [GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTCTCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCAGCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAATACTATATAATAGCACAGACTCTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCATAACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATTTGACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAAATTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACATACTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGACAGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCTAGGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCATTATGTTAGAAAAGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAACACAATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGAACGAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAGCCCGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGCTACAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTGCGTGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATGGTTAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCACCTCCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTATATCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTATATGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTGTACTACTTACC]

[+] EMBL AK109857             [GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTCTCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCAGCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAATACTATATAATAGCACAGACTCTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCATAACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATTTGACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAAATTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACATACTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGACAGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCTAGGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCATTATGTTAGAAAAGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAACACAATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGAACGAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAGCCCGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGCTACAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTGCGTGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATGGTTAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCACCTCCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTATATCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTATATGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTGTACTACTTACC]


>consensus_3966#0 GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGG CGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAAC AAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCG CATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGT GGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGAT GGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCT AAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACC CACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTC TCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCA GCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAATACTATATAATAGCACAGACT CTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCAT AACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATTT GACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAAA TTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACATA CTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGAC AGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCTA GGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCATTATGTTAGAAA AGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAACAC AATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGAAC GAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAGCC CGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGCTA CAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTGCG TGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATGGT TAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCACCT CCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTATA TCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTATA TGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTGTA CTACTTACC



consensusID : consensus_3966#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1461
fasta sequence
                              [GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCACCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCACAAATTAATTAAGCTGCTGAT]

[+] EMBL AK060992             [GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGGCGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAACAAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCGCATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGTGGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGATGGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCTAAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACCCACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCACCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCACAAATTAATTAAGCTGCTGAT]


>consensus_3966#1 GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGG CGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAAC AAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCG CATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGT GGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGAT GGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCT AAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACC CACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGTCCAGGGGCTTAACGT GAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGG GGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGCTGACGCCGGTGATCGTGAGCGT GATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGT TGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGG CACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACAT CCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGC GCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCA GAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAA GCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAG GATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTA CGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACT CTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAG CTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCT CCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTA ATTAATCTGCACCTACCTACCTACCACCACCGCTCCATCCATTTCTATATTATATATATT GATCAATCGACTCGACTGTACGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCA CAAATTAATTAAGCTGCTGAT



consensusID : consensus_3966#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 949
fasta sequence
                              [TGAGTGCGCAGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCTCCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACG]

[+] EMBL AK120038             [TGAGTGCGCAGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGAGCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGACCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCACGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCACGCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGCCGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGGCACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCCCGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCTCCGCTCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACG]


>consensus_3966#2 TGAGTGCGCAGTCCAGGGGCTTAACGTGAAGCAGCTGATGCCTCCATACCTGGGCGTGGA GCTGAGCCCGGAGGATCTCAAGACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGA CCCGCTGACGCCGGTGATCGTGAGCGTGATAACCCTGGACCAGCAGATCGAATACTTCCA CGAGTACAGGAAGCGGCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGCGAGGATCATCGA CGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCAACACCTACTTCACCAC GCCCTTCCGGAGCGTGGAGTACGACATCCCCTCCTACGTGGACCTGCTCGTCTCCGGGGC CGCCAAGCTGCTGGACCAGGTGGCGGCGCTCGGGGCACGCCGGATCGGCTTCGTGGGACT GCCCCCCATCGGCTGCGTCCCCTCCCAGAGGACGCTCGGCGGGGGCCCTCACCGCCGCTG CGAGGAGAAGCGCAACTACGCCGCCAAGCTGTTCAACTCCCGGATGGAGGAGGTGATCGC CGCCAAGACCAATCCGGCCACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCA GGAGCTGGTCGAGAACGGGGACAAGTACGGCTTCACGGAGACCACGCGCGGCTGCTGCGG CACCGGCACCATCGAGGTCACCGGACTCTGCGACGCCCGCTTCGTCGACATCTGCGACAA CGTCTCCAACCACGTCTTCTTCGACAGCTACCACCCTACGCAGCGCGCCTACAAAATCAT CGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCCGCC CGCCAATCTGCCATTCCTTCCTTCTTAATTAATCTGCACCTACCTACCTACCACCTCCGC TCCATCCATTTCTATATTATATATATTGATCAATCGACTCGACTGTACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3966#1      GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGG 60
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      GGCACCACGCGCACTCTATAGTACTCCATCCATCCATCTCTCCTGCAGCTGCAGTGCAGG 60
                                                                                  

consensus_3966#1      CGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAAC 120
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      CGAGGCTGCCTGCTAGCTCGATCGTTAAATACTCAGCTTGCGCTAGATTATAAATTCAAC 120
                                                                                  

consensus_3966#1      AAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCG 180
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      AAGAGAGAGGTAGCGATCGATCTATCTCATCAACAAGATCGAGCCAATTAATTAAGGGCG 180
                                                                                  

consensus_3966#1      CATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGT 240
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      CATGACGATGAAGATGAAGCAGCAGATGATGAACAAGCTCGGCCTCCTTGTGGTGGCGGT 240
                                                                                  

consensus_3966#1      GGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGAT 300
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      GGCGGTGGCGATGGCGCCTGCAGGGAGCTTTGCGTCGTCGTCGGGGAGGGGGGCTCCGAT 300
                                                                                  

consensus_3966#1      GGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCT 360
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      GGTGCCGGCGGTGATCGTGTTCGGCGACTCGATCGTGGATCCAGGGAACAACAACAACCT 360
                                                                                  

consensus_3966#1      AAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACC 420
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      AAAGACGCAGATAAAGGCGAACCATGCCCCCTACGGCATGGACTTCGCCAACAGTGAACC 420
                                                                                  

consensus_3966#1      CACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCA-TCGTCCAGGGGCTTA--- 476
consensus_3966#2      ---------------------------------TGAGTGCG-CAGTCCAGGGGCTTA--- 23
consensus_3966#0      CACCGGCCGCTACTCCAACGGCCTCATTCCCACCGACTTCATCGGTACGGTATCATACTC 480
                                                        ** * *    ** * *   * **   

consensus_3966#1      ---------------ACGTGAAGCAGCTGATGCCTCCATACCTGG--GCGTGGAGCTGAG 519
consensus_3966#2      ---------------ACGTGAAGCAGCTGATGCCTCCATACCTGG--GCGTGGAGCTGAG 66
consensus_3966#0      TCTCTTCTTCTTCTCACTTCAACAATGCAACACTTCATTAAGAGCATGCATGCAGCAGCA 540
                                     ** * **  *    *  * **  **   *   ** ** *** *  

consensus_3966#1      CCCGGAGGATCTCAAG-ACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTACGACCCGC 578
consensus_3966#2      CCCGGAGGATCTCAAG-ACGGGGGTGAGCTTCGCGTCAGGCGCGACGGGGTAGGACCCGC 125
consensus_3966#0      GCAGCAGAGCTGGTAGTGCGTGCACTGACATGAAAACAA-TACTATATAATAGCACAGAC 599
                       * * **       **  ** *      * *     **    * *     **  **   *

consensus_3966#1      TGACGCCGGT-GATCGTGAGCGTG-ATAACC--CTGGACCAGCAGAT----CGAATACTT 630
consensus_3966#2      TGACGCCGGT-GATCGTGAGCGTG-ATAACC--CTGGACCAGCAGAT----CGAATACTT 177
consensus_3966#0      TCTCCGTACTCGACCGCATCCATGCATTGTTTACTGTACTTACAACTACCACGAATGCCA 659
                      *  *     * ** **    * ** **      *** **   **  *    ***** *  

consensus_3966#1      CCACGAGTACAGGAAGCG------GCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGC--- 681
consensus_3966#2      CCACGAGTACAGGAAGCG------GCTGGTGGGGGTTGTGGGGGAGGAGGAGACGGC--- 228
consensus_3966#0      TAACGAAAACAAAATGGTTTACATGCATGTATGTTCTCTGCCGTTAGACATACCGTCATT 719
                        ****  ***  * *        **  **  *   * **  *   **     ** *   

consensus_3966#1      -GAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCA-AC 739
consensus_3966#2      -GAGGATCATCGACGGCGCGCTCTTCGTGGTGTGCGCCGGCACCGACGACATCGCCA-AC 286
consensus_3966#0      TGACTTTTATTAATTAATTTATTTAAAAAATAGACACATATATTTATAGTGATGGGATAA 779
                       **   * **  *        * *      *   * *    *   *       *  * * 

consensus_3966#1      ACCTACTTCACCACGCCCTTCCGG-AGCGTGGAGTACGACATCCCCTCCTACGTGGACCT 798
consensus_3966#2      ACCTACTTCACCACGCCCTTCCGG-AGCGTGGAGTACGACATCCCCTCCTACGTGGACCT 345
consensus_3966#0      ATTAACTTCCCAACTAGCTCCCTTTAAAAAAGAACATGACAAAAGTTTCCAAAATCACAT 839
                      *   ***** * **   ** **   *     **  * ****     * * *     ** *

consensus_3966#1      GCTCGT---CTCCGGGGCCG----CCAAGCTGCTGGACCAGGT-----GGCGGCGCTCGG 846
consensus_3966#2      GCTCGT---CTCCGGGGCCG----CCAAGCTGCTGGACCAGGT-----GGCGGCGCTCGG 393
consensus_3966#0      ACTCCTAGATTCTTAGGATAAGATCCATTCACCTAAATTCACTTTTGAAAAGACCGTCGA 899
                       *** *    **   **       ***  *  **  *     *        * *  *** 

consensus_3966#1      GGCACGCCGGAT-CGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCC-----CTCCCA 900
consensus_3966#2      GGCACGCCGGAT-CGGCTTCGTGGGACTGCCCCCCATCGGCTGCGTCCC-----CTCCCA 447
consensus_3966#0      CAGTTACCAATTTCAAAAGTGTAACATAATTACACATAGTATTCATACCATGTTCTTCCT 959
                            **   * *      **   *      * *** *  * * * **     ** ** 

consensus_3966#1      GAGGACGCTCGGCGG--GGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCC 958
consensus_3966#2      GAGGACGCTCGGCGG--GGGCCCTCACCGCCGCTGCGAGGAGAAGCGCAACTACGCCGCC 505
consensus_3966#0      AGGTAGTATCAATGATCAAGAATTGGAACATATAGCTAGACAATATGCA-TTATGTTAGA 1018
                        * *   **   *     *   *          ** **   *   ***  ** *     

consensus_3966#1      AAGCTG--TTCAACTCCCG--GATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGC--C 1012
consensus_3966#2      AAGCTG--TTCAACTCCCG--GATGGAGGAGGTGATCGCCGCCAAGACCAATCCGGC--C 559
consensus_3966#0      AAAGTGGTTTTTTTTTCTGAAGACCATATATATGATTACAGCAACGTTAAATTAACCAAC 1078
                      **  **  **    * * *  **      *  ****  * ** * *   ***    *  *

consensus_3966#1      ACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGT-----CGAGA 1067
consensus_3966#2      ACCACCAGGATGGTGTACGTCGACATCTACACCATCCTGCAGGAGCTGGT-----CGAGA 614
consensus_3966#0      ACAATCAATGCACTGGTCCTTAAGACAAGAAACCTTTTGATGCCATTTATATTTGTGAGA 1138
                      ** * **      **  * *  * *     * * *  **  *    *  *      ****

consensus_3966#1      ACGGGGACAA----GTACGGCTTCACGGAGACCACGCGCGGCTGC-TGCGG-CACCGGCA 1121
consensus_3966#2      ACGGGGACAA----GTACGGCTTCACGGAGACCACGCGCGGCTGC-TGCGG-CACCGGCA 668
consensus_3966#0      ACGAGTATAAAATTGTGTTCTTCTTTCTCCACCATACATGCATGCATGCAAATAATGTAG 1198
                      *** * * **    **     *        ****  *  *  *** ***    *  *   

consensus_3966#1      CCATCGAGGTCACCGGACT----CTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTC 1177
consensus_3966#2      CCATCGAGGTCACCGGACT----CTGCGACGCCCGCTTCGTCGACATCTGCGACAACGTC 724
consensus_3966#0      CCCGCATAGTATATATACTAGTATAGTAGTAGTGAGAAATTAATTAATGGAAATACTAGC 1258
                      **  *   **      ***      *              *    *   *  * *    *

consensus_3966#1      TCCAACCACGTCTTCTTCGA----CAGCTACCACCCTACGCA-GCGCGCCTA--CAAAAT 1230
consensus_3966#2      TCCAACCACGTCTTCTTCGA----CAGCTACCACCCTACGCA-GCGCGCCTA--CAAAAT 777
consensus_3966#0      TACAACTACGTACAATACCAAGTATAGGTGGAGATATATGCATGCATGCATGAGTAGGTG 1318
                      * **** ****    * * *     ** *       ** *** **  ** *    *    

consensus_3966#1      CATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCC 1290
consensus_3966#2      CATCGTCGACTACATCTTCGACAACTATCTCCAGTTCCTCCTCGCCTAGCCGCCCCGCCC 837
consensus_3966#0      CGTGCAGGGCGGCGTTATTAGCTGGCCGCCGCGTGGTGTACATGCATGGCGATGGTGATG 1378
                      * *    * *  * *  *   *      *  *      * *  ** * **      *   

consensus_3966#1      GCCCGCCAATCTGCCATTC--CTTCCTTCTTAATTAATCTGCAC-CTACCTACCTACCAC 1347
consensus_3966#2      GCCCGCCAATCTGCCATTC--CTTCCTTCTTAATTAATCTGCAC-CTACCTACCTACCAC 894
consensus_3966#0      GTTAATTTGGACGACAGACGACATCGACATGCATGCATGGACAGGCCATCTCCGCCTCAC 1438
                      *           * **  *  * **    *  **  **   **  * * ** *    ***

consensus_3966#1      CACCGCTCCATCCATTT-CTAT-----ATTATATATATTGATCAATCGACT-CGACTGTA 1400
consensus_3966#2      CTCCGCTCCATCCATTT-CTAT-----ATTATATATATTGATCAATCGACT-CGACTGTA 947
consensus_3966#0      CTCCGATCGATCAATCCGCCATCATCAATTTCATTCATCATTTAATACACTACAGTTGTA 1498
                      * *** ** *** **   * **     ***  **  **   * ***  *** *   ****

consensus_3966#1      CGTATTTTCGACAACAATTTTCCCCTTCTTTTTTCCCGCACAAATTAATTAAGCTGCTGA 1460
consensus_3966#2      CG---------------------------------------------------------- 949
consensus_3966#0      TATCACGCGCCATTCTTTATTTTGCATCCATCTCTCATCCTTATTCCATGCAGGACTGTA 1558
                                                                                  

consensus_3966#1      T----------------------------------------------------------- 1461
consensus_3966#2      ------------------------------------------------------------
consensus_3966#0      TATGTGCATGAGCTATCATTAATTAATTTAGTTGCCGGTACTGCAGTTGCTGACTTGCTG 1618
                                                                                  

consensus_3966#1      -----------
consensus_3966#2      -----------
consensus_3966#0      TACTACTTACC 1629
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)