These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2497 fasta sequence [TTGTCGCCTTCAGGCTTCTCTGCTCCTATAACATCAAAATAAGATTCATCCTAACTCGATAACTGGGTGTTCGCCGGTGAGACCATTATACGGCGTCGGCATGGCTTCAGACACAGAGGATGGTGGAGAGGTGCAACCTACAGAGACGACCACCGATGACTCCTCGTCGCCCATGACGGTGGAGAAGGAGGAGCAGGCGGCGTCGACTGGGATGGAGATAGTGAAGGCAGGAAATAGTAATGCTCAAGAAACTGGGGGTCTCTCTCTAAATTACGAGGAAGCGAGAGCTCTCCTTGGAAGACTGGAATTTCAAAAAGGTAATGTAGAAGCTGCTCTCTGTGTGTTTGATGGCATAGACCTTCAAGCTGCCATCCAACGATTCCAACCATCACTTACTGATAAGACGACATCTAAGAAAGGCCAGACGAAATCAGAATCAGGCATAGAAAATCCTGCTACCCTTGTTCTTGAAGCCATTTACTTGAAATCATTGTCCCTTCAAAAGCTAGGAAAATCAACAGAAGCTGCGAATCAGTGCAAGAGCGTTCTTGATTCAGTCGAAAGCATGTTCCAGAATGGTCCTCCTGACATCGAACAGAAGCTACAAGAAACTATCAACAAATCCGTTGAGCTTCTCCCAGAGGCATGGAAGCAAGCT-GGATCACATCAAGAAGCATTAGCTTCGTACCGACGCAGTCTTCTCAGCCAATGGAATCTTGACGATGAATGTTGCACAAGGATTCAGAAGAGATTTGCTGCATTTCTGCTGTATAGCTGTGTAGAGGGGAGCCCACCCAGCTCGGGATCACAAGTTGAAGGTTCTTTTATTCCTAAGAACAATGTTGAAGAGGCCATTCTACTTCTAATGGTAGTACTGAAGAAATGGTACCAGGGGAAGACGCATTGGGATCCATCGGTGATGGAACATTTGACATACGCATTATCGCTTTGCGACCAACCATCTCTTCTTGCAAAGAATCTAGAAGAGGTTTTGCCTGGAATATATCCTCGCACCGAGAGATGGCACACTCTATCTCTTTGCTATTATGCAATTGGTCAGAAAGAAGTTGCACTAAACTTTCTGAGGAAGTCTCTGAACAAGCATGAGAATCCAAATGATATAATGGCATTGTTGTTGGCTAGTAAGATATGCAGTGAGGAGCGACATCTAGCTTCCGAGGGCGTCGAATACGCGAGAAGAGCGATCAAACTTTCTGAATCTTCAGATGTTCATCTGAAGAGTGTGGGACTCCATTTCTTGGGGAATTGTCTTGGCAAGAAGTCAAAGACTGTCTCATCAGATCACCAAAGGTCTCTCTTGCAGAATGAAACTCTAAAGTCATTCTCAGAGTCGATTGCTCTTGACCGGCACAATCCAGACCTGATATTTGACATGGGAGTTGAATATGCTGAGCAGAGGAACATGAATGCCGCACTGCGATGCGCAAAGGAATATATCGACGCAATCGGTGGATCAGTCTCAAAAGGTTGGAGGTTGCTAGCATTGGTTCTTTCTGCACAGCAGAGATATCCTGAAGCAGAAGTGGCAACAAATGCTGCATTAGATGAGACTGCAAAGTTGGATCAAGGGTCATTACTTAGTCTAAAGGCTAAGCTGAAGGTTGCTCAATCATCACCTATGGAAGCAGTTGAAGCATACCGTGCCCTTCTTGCTCTTGTTCAAGCCCAAAAGAATTCCTCTGGATCTAGCAAGACTGATGCAGAGGGACAGAATGACAGTGTAAGTGAGTTTGAAATCTGGCAAGGACTTGCAAACCTGTACTCCAGTCTCTCAATCTGGAGAGACGCTGAGATATGTCTACGGAAGGCTAGAGCCCTGAAATCCTACTCGGCTGCAACAATGCATGCAGAAGGTTACATGCTCGAGGCGCGAGATCAGAACAAGGAGGCATTGGCTGCCTACGTCAATGCATTCTCGATAGAGCTAGAGCATGTTCCATCCAAGGTGGCCATTGGTGCACTTCTCTGCAAGCAAGGGTCAAGGTATCTCCCTGCAGCGAGATGCTTCCTCTCGGATGCACTGAGAATTGAGCCTACGAACAGGATGGCTTGGCTTCATTTAGGGAAAGTTCACAGGAATGATGGGAGGATCAATGATGCTGCTGATTGTTTTCAGGCTGCGGTGATGCTTGAGGAGTCTGACCCTGTAGAGAGTTTTAGGTCACTCGCATGAGGATATCACAATTCACAAACATGTTCTCTCTTGTTTTTTCAGGTTCATAGTATTTGAGAGAAAAAACACACATTAGATATTACTAAGGTTGTTGTATCTAAAAATATGTGTAATCCTGTATATTTTTTTTCTTTCTGAACTCTATCAGGCATTAACAAACAGAGTGGTGTATCAAAGCTGTAATTAATTAACAACTCACCGTCCTTATATAATTGTTTTACTTGGTGATTTCATCTGGTGTAGCTCCAGAAAATAACTGGATTTGATAATGTAATATGAATCCCAAGTACATAATTCAGCAAA] [+] EMBL AY323950 [TTGTCGCCTTCAGGCTTCTCTGCTCCTATAACATCAAAATAAGATTCATCCTAACTCGATAACTGGGTGTTCGCCGGTGAGACCATTATACGGCGTCGGCATGGCTTCAGACACAGAGGATGGTGGAGAGGTGCAACCTACAGAGACGACCACCGATGACTCCTCGTCGCCCACGACGGTGGAGAAGGAGGAGCAGGCGGCGTCGACTGGGATGGAGATAATGAAGGCAGGAAATAGTAATGCTCAAGAAACTGGGGGTCTCTCTCTAAATTACGAGGAAGCGAGAGCTCTCCTTGGAAGACTGGAATTTCAAAAAGGTAATGTAGAAGCTGCTCTCTGTGTGTTTGATGGCAAAGACCTTCAAGCTGCCATCCAACGATTCCAACCATCACTTACTGATAAGACGACATCTAAGAAAGGCCAGACGAAATCAGAATCAGGCATAGAAAGTCCTGCTACCCTTGTTCTTGAAGCCATTTACTTGAAATCATTGTCCCTTCAAAAGCTAGGAAAATCAACAGAAGCTGCAAATCAGTGCAAGAGCGTTCTTGATTCAGTCGAAAGC TGTTCCAGAATGGTCCTCCTGACATCGAACAGAAGCTACAAGAAACTATCAACAAATCCGTTGAGCTTCTCCCAGAGGCATGGAAGCAAGCTGGGATCACATCAAGAAGCATTAGCTTCGTACCGACGCAGTCTTCTCAGCCAATGGAATCTTGACGATGAATGTTGCACAAGGATTCAGAAGAGATTTGCTGCATTTCTGCTGTATAGCTGTGTAGAGGGGAGCCCACCCAGCTCGGGATCACAAGTTGAAGGTTCTTTTATTCCTAAGAACAATGTTGAAGAGGCCATTCTACTTCTAATGGTAGTACTGAAGAAATGGTACCAGGGGAAGACGCATTGGGATCCATCGGTGATGGAACATTTGACATACGCATTATCGCTTTGCGACCAACCATCTCTTCTTGCAAAGAATCTTGAAGAGGTTTTGCCTGGAATATATCCTCGCACCGAGAGATGGTACACTCTATCTCTTTGCTATTATGCAATTGGTCAGAAAGAAGTTGCACTGAACTTTCTGAGGAAGTCTCTGAACAAGCATGAGAATCCAAATGATATAATGGCATTGTTGTTGGCTAGTAAGATATGCAGTGAGGAGCGACATCTAGCTTCCGAGGGCGTCGAATACGCGAGAAGAGCGATCAAACTTTCTGAATCTTCAGATGTTCATCTGAAGAGTGTGGGACTCCATTTCTTGGGGAATTGTCTTGGCAAGAAGTCAAAGACTGTCTCATCAGATCACCAAAGGTCTCTCTTGCAGAATGAAACTCTAAAGTCATTCTCAGAGTCGATTGCTCTTGACCGGCACAATCCAGACCTGATATTTGACATGGGAGTTGAATATGCTGAGCAGAGGAACATGAATGCCGCACTGCGATGCGCAAAGGAATATATCGACGCAATCGGTGGATCAGTCTCGAAAGGTTGGAGGTTGTTAGCATTGGTTCTTTCTGCACAGCAGAGATATCCTGAAGCAGAAGTGGCAACAAATGCTGCATTAGATGAGACTGCAAAGTTGGATCAAGGGTCATTACTTAGTCTAAAGGCTAAGCTGAAGGTTGCTCAATCATCACCTATGGAAGCAGTTGAAGCATACCGTGCCCTTCTTGCTCTTGTTCAAGCCCAAAAGAATTCTTCTGGATCTAGCAAGACTGATGCAGAGGGACAGAATGACAGTGTAAGTGAGTTTGAAATCTGGCAAGGACTTGCAAACCTGTACTCCAGTCTCTCAATCTGGAGAGACGCTGAGATATGTCTACGGAAGGCTAGAGCCCTGAAATCCTACTCGGCTGCAACAATGCATGCAGAAGGTTACATGCTCGAGGCGCGAGATCAGAACAAGGAGGCATTGGCTGCCTACGTCAATGCATTCTCGATAGAGCTAGAGCATGTTCCATCCAAGGTGGCCATTGGTGCACTTCTCTGCAAGCAAGGGTCAAGGTATCTCCCTGCAGCGAGATGCTTCCTCTCGGATGCACTGAGAATTGAGCCTACGAACAGGATGGCTTGGCTTCATTTAGGGAAAGTTCACAGGAATGATGGGAGGATCAATGATGCTGCTGATTGTTTTCAGGCTGCGGTGATGCTTGAGGAGTCTGACCCTGTAGAGAGTTTTAGGTCACTCGCATGAGGATATCACAATTCACAAACATGTTCTCTCTTGTTTTTTCAGGTTCATAGTATTTGAGAGAAAAA ] [+] EMBL AK069979 [ GGTGTTCGCCGGTGAGACCATTATACGGCGTCGGCATGGCTTCAGACACAGAGGATGGTGGAGAGGTGCAACCTACAGAGACGACCACCGATGACTCCTCGTCGCCCATGACGGTGGAGAAGGAGGAGCAGGCGGCGTCGACTGGGATGGAGATAGTGAAGGCAGGAAATAGTAATGCTCAAGAAACTGGGGGTCTCTCTCTAAATTACGAGGAAGCGAGAGCTCTCCTTGGAAGACTGGAATTTCAAAAAGGTAATGTAGAAGCTGCTCTCTGTGTGTTTGATGGCATAGACCTTCAAGCTGCCATCCAACGATTCCAACCATCACTTACTGATAAGACGACATCTAAGAAAGGCCAGACGAAATCAGAATCAGGCATAGAAAATCCTGCTACCCTTGTTCTTGAAGCCATTTACTTGAAATCATTGTCCCTTCAAAAGCTAGGAAAATCAACAGAAGCTGCGAATCAGTGCAAGAGCGTTCTTGATTCAGTCGAAAGCATGTTCCAGAATGGTCCTCCTGACATCGAACAGAAGCTACAAGAAACTATCAACAAATCCGTTGAGCTTCTCCCAGAGGCATGGAAGCAAGCT GGATCACATCAAGAAGCATTAGCTTCGTACCGACGCAGTCTTCTCAGCCAATGGAATCTTGACGATGAATGTTGCACAAGGATTCAGAAGAGATTTGCTGCATTTCTGCTGTATAGCTGTGTAGAGGGGAGCCCACCCAGCTCGGGATCACAAGTTGAAGGTTCTTTTATTCCTAAGAACAATGTTGAAGAGGCCATTCTACTTCTAATGGTAGTACTGAAGAAATGGTACCAGGGGAAGACGCATTGGGATCCATCGGTGATGGAACATTTGACATACGCATTATCGCTTTGCGACCAACCATCTCTTCTTGCAAAGAATCTAGAAGAGGTTTTGCCTGGAATATATCCTCGCACCGAGAGATGGCACACTCTATCTCTTTGCTATTATGCAATTGGTCAGAAAGAAGTTGCACTAAACTTTCTGAGGAAGTCTCTGAACAAGCATGAGAATCCAAATGATATAATGGCATTGTTGTTGGCTAGTAAGATATGCAGTGAGGAGCGACATCTAGCTTCCGAGGGCGTCGAATACGCGAGAAGAGCGATCAAACTTTCTGAATCTTCAGATGTTCATCTGAAGAGTGTGGGACTCCATTTCTTGGGGAATTGTCTTGGCAAGAAGTCAAAGACTGTCTCATCAGATCACCAAAGGTCTCTCTTGCAGAATGAAACTCTAAAGTCATTCTCAGAGTCGATTGCTCTTGACCGGCACAATCCAGACCTGATATTTGACATGGGAGTTGAATATGCTGAGCAGAGGAACATGAATGCCGCACTGCGATGCGCAAAGGAATATATCGACGCAATCGGTGGATCAGTCTCAAAAGGTTGGAGGTTGCTAGCATTGGTTCTTTCTGCACAGCAGAGATATCCTGAAGCAGAAGTGGCAACAAATGCTGCATTAGATGAGACTGCAAAGTTGGATCAAGGGTCATTACTTAGTCTAAAGGCTAAGCCGAAGGTTGCTCAATCATCACCTATGGAAGCAGTTGAAGCATACCGTGCCCTTCTTGCTCTTGTTCAAGCCCAAAAGAATTCCTCTGGATCTAGCAAGACTGATGCAGAGGGACAGAATGACAGTGTAAGTGAGTTTGAAA ] [+] EMBL AK071439 [ GTTCGCCGGTGAGACCATTATACGGCGTCGGCATGGCTTCAGACACAGAGGATGGTGGAGAGGTGCAACCTACAGAGACGACCACCGATGACTCCTCGTCGCCCATGACGGTGGAGAAGGAGGAGCAGGCGGCGTCGACTGGGATGGAGATAGTGAAGGCAGGAAATAGTAATGCTCAAGAAACTGGGGGTCTCTCTCTAAATTACGAGGAAGCGAGAGCTCTCCTTGGAAGACTGGAATTTCAAAAAGGTAATGTAGAAGCTGCTCTCTGTGTGTTTGATGGCATAGACCTTCAAGCTGCCATCCAACGATTCCAACCATCACTTACTGATAAGACGACATCTAAGAAAGGCCAGACGAAATCAGAATCAGGCATAGAAAATCCTGCTACCCTTGTTCTTGAAGCCATTTACTTGAAATCATTGTCCCTTCAAAAGCTAGGAAAATCAACAGAAGCTGCGAATCAGTGCAAGAGCGTTCTTGATTCAGTCGAAAGCATGTTCCAGAATGGTCCTCCTGACATCGAACAGAAGCTACAAGAAACTGTCAACAAATCCGTTGAGCTTCTCCCAGAGGCATGGAAGCAAGCT GGATCACATCAAGAAGCATTAGCTTCGTACCGACGCAGTCTTCTCAGCCAATGGAATCTTGACGATGAATGTTGCACAAGGATTCAGAAGAGATTTGCTGCATTTCTGCTGTATAGCTGTGTAGAGGGGAGCCCACCCAGCTCGGGATCACAAGTTGAAGGTTCTTTTATTCCTAAGAACAATGTTGAAGAGGCCATTCTACTTCTAATGGTAGTACTGAAGAAATGGTACCAGGGGAAGACGCATTGGGATCCATCGGTGATGGAACATTTGACATACGCATTATCGCTTTGCGACCAACCATCTCTTCTTGCAAAGAATCTAGAAGAGGTTTTGCCTGGAATATATCCTCGCACCGAGAGATGGCACACTCTATCTCTTTGCTATTATGCAATTGGTCAGAAAGAAGTTGCACTAAACTTTCTGAGGAAGTCTCTGAACAAGCATGAGAATCCAAATGATATAATGGCATTGTTGTTGGCTAGTAAGATATGCAGTGAGGAGCGACATCTAGCTTCCGAGGGCGTCGAATACGCGAGAAGAGCGATCAAACTTTCTGAATCTTCAGATGTTCATCTGAAGAGTGTGGGACTCCATTTCTTGGGGAATTGTCTTGGCAAGAAGTCAAAGACTGTCTCATCAGATCACCAAAGGTCTCTCTTGCAGAATGAAACTCTAAAGTCATTCTCAGAGTCGATTGCTCTTGACCGGCACAATCCAGACCTGATATTTGACATGGGAGTTGAATATGCTGAGCAGAGGAACATGAATGCCGCACTGCGATGCGCAAAGGAATATATCGACGCAATCGGTGGATCAGTCTCAAAAGGTTGGAGGTTGCTAGCATTGGTTCTTTCTGCACAGCAGAGATATCCTGAAGCAGAAGTGGCAACAAATGCTGCATTAGATGAGACTGCAAAGTTGGATCAAGGGTCATTACTTAGTCTAAAGGCTAAGCTGAAGGTTGCTCAATCATCACCTATGGAAGCAGTTGAAGCATACCGTGCCCTTCTTGCTCTTGTTCAAGCCCAAAAGAATTCCTCTGGATCTAGCAAGACTGATGCAGAGGGACAGAATGACAGTGTAAGTGAGTTTGAAATCTGGCAAGGACTTGCAAACCTGTACTCCAGTCTCTCAATCTGGAGAGACGCTGAGATATGTCTGCGGAAGGCTAGAGCCCTGAAATCCTACTCGGCTGCAACAATGCATGCAGAAGGTTACATGCTCGAGGCGCGAGATCAGAACAAGGTGGCATTGGCTGCCTACGTCAATGCATTCTCGATAGAGCTAGAGCATGTTCCATCCAAGGTGGCCATTGGTGCACTTCTCTGCAAGCAAGGGTCAAGGTATCTCCCTGCAGCGAGATGCTTCCTCTCGGATGCACTGAGAATTGAGCCTACGAACAGGATGGCTTGGCTTCATTTAGGGAAAGTTCACAGGAATGATGGGAGGATCAATGATGCTGCTGATTGTTTTCAGGCTGCGGTGATGCTTGAGGAGTCTGACCCTGTAGAGAGTTTTAGGTCACTCGCATGAGGATATCACAATTCACAAACATGTTCTCTCTTGTTTTTTCAGGTTCATAGTATTTGAGAGAATTAACACACATTAGATATTACTAAGGTTGTTGTATCTAAAAATATGTGTAATCCTGTATATTTTTTTTCTTTCTGAACTCTATCAGGCATTAACAAACAGAGTGGTGTATCAAAGCTGTAATTAATTAACAACTCACCGTCCTTATATAATTGTTTTACTTGGTGATTTCATCTGGTGTAGCTCCAGAAAATAACTGGATTTGATAATGTAATATGAATCCCAAGTACATAATTCAGCAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||