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Oryza sativa
cluster # 3977 cluster # 3977       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3977#0 length = 1061 sequences # 3  

consensusID : consensus_3977#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1061
fasta sequence
                              [GGAGGGGTGCGCCGGGTCGGCCATCCTCGCCGGGTTCGACGACGCCGTCGCCGACGGCGTCGACGTCATCTCCGTCTCCCTCGGCGCGTCGCCCTACTTCCGCCCGGACTTCTCCGACGACCCCATCGCCATCGGCTCGTTCCACGCCGTGGCCAAGGGCATCATGGTCGTCTGCTCCGCCGGCAACGCAGGGCCGGACGCCGCCACCGTCGTGAACGCGGCGCCGTGGATCCTTACCGTCGCGGCGAGCACGATCGACCGCTACTTCCAATCGGACGTCGTGCTCGGCGGCAACAACACCGCTGTCAAGGGTGGAGCTATAAACTTCTCCAACTTGAACAAATCACCAAAATACCCATTGATCACCGGTGAATCAGCCAAGTCCAGCTCAGTTTCTGATACCGAGTCAGCAAGTCACTGTGAGCCGGGGACGCTGGATGCGAGCAAGATAAAAGGGAAGATCGTGCTGTGTCACCACTCGCGGAACAGCGACACGCCCAAGACGGAGAAGGTCGGGGAGCTCAAGAGCGCCGGCGCGGTTGGCGCCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCCTGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAGTGAGCCTGTCGTGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGTGGTCGCCTACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGACGTGGCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGCCGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGTCGGGGACGTCCATGGCCTGCCCGCACGTGGCCGGGGCGGCGGCCGCCGTCAGGGCGTGGAACCCGGCGTGGAGCCCTGCGGCGATCCGGTCGGCGATCATGACGACGGCGGCCCAGCTGAACAACGACGGGGCGGCCGTGACGACCGACTCGGGGTCGCCGGCGACGCCGTACGACCACGGCGCGG]

[+] EMBL AK106911             [GGAGGGGTGCGCCGGGTCGGCCATCCTCGCCGGGTTCGACGACGCCGTCGCCGACGGCGTCGACGTCATCTCCGTCTCCCTCGGCGCGTCGCCCTACTTCCGCCCGGACTTCTCCGACGACCCCATCGCCATCGGCTCGTTCCACGCCGTGGCCAAGGGCATCATGGTCGTCTGCTCCGCCGGCAACGCAGGGCCGGACGCCGCCACCGTCGTGAACGCGGCGCCGTGGATCCTTACCGTCGCGGCGAGCACGATCGACCGCTACTTCCAATCGGACGTCGTGCTCGGCGGCAACAACACCGCTGTCAAGGGTGGAGCTATAAACTTCTCCAACTTGAACAAATCACCAAAATACCCATTGATCACCGGTGAATCAGCCAAGTCCAGCTCAGTTTCTGATACCGAGTCAGCAAGTCACTGTGAGCCGGGGACGCTGGATGCGAGCAAGATAAAAGGGAAGATCGTGCTGTGTCACCACTCGCGGAACAGCGACACGCCCAAGACGGAGAAGGTCGGGGAGCTCAAGAGCGCCGGCGCGGTTGGCGCCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCCTGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAGTGAGCCTGTCGTGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGTGGTCGCCCACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGACGTGGCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGCCGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGCCGGGGACGTCCATGGCCTGCCCGCACGTGGCCGGGGCGGCGGCCGCCGTCAGGGCGTGGAACCCGGCGTGGAGCCCTGCGGCGATCCGGTCGGCGATCATGACGACGGCGGCCCAGCTGAACAACGACGGGGCGGCCGTGACGACCGACTCGGGGTCGCCGGCGACGCCGTACGACCACGGCGCGG]
[+] EMBL BI807404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCGGTTGGC CCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCCTGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAGTGAGCCTGTCGCGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGTGGTCGCCTACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGACGT GCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGCCGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGTCGGGGACGTCCATGGCCTGCCCGCACGTG                                                                                                                                                             ]
[+] EMBL AU076255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGGCGCCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCCTGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAGTGAGCCTGTCGTGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGTGGTCGCCTACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGACGTGGCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGCCGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGTCGGGGACGTCCATGGCCTGCCCGCACGTGGCCGG                                                                                                                                                        ]


>consensus_3977#0 GGAGGGGTGCGCCGGGTCGGCCATCCTCGCCGGGTTCGACGACGCCGTCGCCGACGGCGT CGACGTCATCTCCGTCTCCCTCGGCGCGTCGCCCTACTTCCGCCCGGACTTCTCCGACGA CCCCATCGCCATCGGCTCGTTCCACGCCGTGGCCAAGGGCATCATGGTCGTCTGCTCCGC CGGCAACGCAGGGCCGGACGCCGCCACCGTCGTGAACGCGGCGCCGTGGATCCTTACCGT CGCGGCGAGCACGATCGACCGCTACTTCCAATCGGACGTCGTGCTCGGCGGCAACAACAC CGCTGTCAAGGGTGGAGCTATAAACTTCTCCAACTTGAACAAATCACCAAAATACCCATT GATCACCGGTGAATCAGCCAAGTCCAGCTCAGTTTCTGATACCGAGTCAGCAAGTCACTG TGAGCCGGGGACGCTGGATGCGAGCAAGATAAAAGGGAAGATCGTGCTGTGTCACCACTC GCGGAACAGCGACACGCCCAAGACGGAGAAGGTCGGGGAGCTCAAGAGCGCCGGCGCGGT TGGCGCCGTCCTCGTCGACGACCTTGAGAAGGCCGTCGCCACCGCCTACATCGACTTCCC TGTCACGGAGATCACCTCCAACGCCGCCGCCGACATTCACAAGTATATCTCCTCCACCAG TGAGCCTGTCGTGACCATCACGCCGACGATCACCGTGACGGAGTACAAGCCGGCGCCGGT GGTCGCCTACTTCTCCTCGAGAGGCCCGTCGCCGCAGACGCCCAACATCCTCAAGCCGGA CGTGGCGGCGCCGGGGGTGAACATCCTGGCGTCATGGATCCCGACGTCGACGCTCCCGGC CGGCGAGGAGAAGCCGTCGCAGTTCAACCTCGTGTCGGGGACGTCCATGGCCTGCCCGCA CGTGGCCGGGGCGGCGGCCGCCGTCAGGGCGTGGAACCCGGCGTGGAGCCCTGCGGCGAT CCGGTCGGCGATCATGACGACGGCGGCCCAGCTGAACAACGACGGGGCGGCCGTGACGAC CGACTCGGGGTCGCCGGCGACGCCGTACGACCACGGCGCGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)