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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4000#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1569 fasta sequence
[CAAGAAATCGAGCTGCTGCTTTGTTTGATCGCAATGGCAATGGAGCCTCCTCCCCTGTTCCTGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCGTCACGGTGGCCACCGGCGTCACCTACGACCGCCGGAGCATCGAGCGGTGGTTCTTCAAGTACGGCAAGACGACGTGCCCGGCCACCATGCAGCGGCTTGCTTCCTTCGACTTCACTCCCAACCACACCCTCAAGCGCGTCATCTCGTCGTGGCTGGACCGCGCCTCCTCGTCGTCGTCGCCGAGCACGGCCGGCTCGCCGGCGACGACGTCGTCGTCGTCGTCGTCAAACGCGATGGAGAGGGAGAGGTTGCCGTCGGTGCTCGCTGGCATTGAGGAGACGCCGTTCAAGGCGACCGCGCTCAAGAACCTCAAGTCCTGCATGGCCGGCGACGAGGCGGCGCGGGAGGATTTCGTGGCGTGCGGCGGCATCCAGGTGCTCGGCCGGGTCATGACGCAGGCGCTGGAGGAGAGCTCCGCCGGGGGGGACTTCTCGGCGTTCCGGACGTGCGAGGAGGCCGCCGCCGTCCTCGCCACGCTGCCGCTCTCGGACGACGCGTCGGTGGAGCTCCTGCTCAAGCCGGAGTGCATAAGGCCCGTGTCCGTGCTGGTCCAGCGCGGCAGCGCCGAGGCGAGGCTGCACGCAATGTCCATGATCTCCAAGATCTCCAGGGCCAGCGTCCGCGACTGGACCGCGGAGGTCGACGTCGACGACATGGTCAAGGCCCTCCTCGAGCTCCTCTCCGACGGCGCCTCCGCGAAGCTGAGCTCCCGCGCGCTCGACGTGCTCCTCGACGTCACGGCGCGGTACTCCCGCGGCGCGCGGCGCGCCAAGGCCGTGGAGCTGGGCGCCGTGCGCGTCCTCGCCGAGCTCCTCCTCGACGCCGACCGCCACGTCGCCGAGCGGTCGCTCCTCCTCCTGAAGCGCATGTGCAAGTGCCCCGAGGGGCGGCTGGCCTTCGCCGAGCACGGGCTGGCGGTGGCCGCCGTGGCGCGCGCCGTGCTCCGGGTGTCCGGGCTCGCCACGAGGCTCGCCGTCAACGTGCTGTGGCTGGTGGCGTGCGCCCCGGCCCCCGCCGAGAGGGTGCTGGAGGACATGGTGGTGGGCGGCGCCGTGGCGAAGCTGCTGGCGCTGATGCAAGTGGAGAGCTCGCCGTCGACCAAGGACAAGGCGGTGAAGATGCTGCGAGCGCACGGCGCGTTCTGGAGGCAGTACCCTTGCTTCCCCACGGACCTCAAGGACTACCTCAAATCTCTCAACTGATCATCTTTCAGAGTGATCAGTAAAGTGATTTGTAAATTGTAAATTAAGAGAAATTGGATGTGTATTGTTTTGTAGGAATACAGGAGATTAAAGCAGGACATTCAGCATGGTATATGCATCTGTGTTTGTGTGTGGGCTGTCTAAAATCGCATGAATTCTGCGTGATTTTCATAGAAATTTGAAATTAAACAATTCAAGTGCATTAGGAGATAGGAAAAAAAATCTAGGTGGTGTTTTTTTTCTAAAGATGAAGATTAAGATTAAGATTAA]
[+] EMBL AK070506 [CAAGAAATCGAGCTGCTGCTTTGTTTGATCGCAATGGCAATGGAGCCTCCTCCCCTGTTCCTGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCGTCACGGTGGCCACCGGCGTCACCTACGACCGCCGGAGCATCGAGCGGTGGTTCTTCAAGTACGGCAAGACGACGTGCCCGGCCACCATGCAGCGGCTTGCTTCCTTCGACTTCACTCCCAACCACACCCTCAAGCGCGTCATCTCGTCGTGGCTGGACCGCGCCTCCTCGTCGTCGTCGCCGAGCACGGCCGGCTCGCCGGCGACGACGTCGTCGTCGTCGTCGTCAAACGCGATGGAGAGGGAGAGGTTGCCGTCGGTGCTCGCTGGCATTGAGGAGACGCCGTTCAAGGCGACCGCGCTCAAGAACCTCAAGTCCTGCATGGCCGGCGACGAGGCGGCGCGGGAGGATTTCGTGGCGTGCGGCGGCATCCAGGTGCTCGGCCGGGTCATGACGCAGGCGCTGGAGGAGAGCTCCGCCGGGGGGGACTTCTCGGCGTTCCGGACGTGCGAGGAGGCCGCCGCCGTCCTCGCCACGCTGCCGCTCTCGGACGACGCGTCGGTGGAGCTCCTGCTCAAGCCGGAGTGCATAAGGCCCGTGTCCGTGCTGGTCCAGCGCGGCAGCGCCGAGGCGAGGCTGCACGCAATGTCCATGATCTCCAAGATCTCCAGGGCCAGCGTCCGCGACTGGACCGCGGAGGTCGACGTCGACGACATGGTCAAGGCCCTCCTCGAGCTCCTCTCCGACGGCGCCTCCGCGAAGCTGAGCTCCCGCGCGCTCGACGTGCTCCTCGACGTCACGGCGCGGTACTCCCGCGGCGCGCGGCGCGCCAAGGCCGTGGAGCTGGGCGCCGTGCGCGTCCTCGCCGAGCTCCTCCTCGACGCCGACCGCCACGTCGCCGAGCGGTCGCTCCTCCTCCTGAAGCGCATGTGCAAGTGCCCCGAGGGGCGGCTGGCCTTCGCCGAGCACGGGCTGGCGGTGGCCGCCGTGGCGCGCGCCGTGCTCCGGGTGTCCGGGCTCGCCACGAGGCTCGCCGTCAACGTGCTGTGGCTGGTGGCGTGCGCCCCGGCCCCCGCCGAGAGGGTGCTGGAGGACATGGTGGTGGGCGGCGCCGTGGCGAAGCTGCTGGCGCTGATGCAAGTGGAGAGCTCGCCGTCGACCAAGGACAAGGCGGTGAAGATGCTGCGAGCGCACGGCGCGTTCTGGAGGCAGTACCCTTGCTTCCCCACGGACCTCAAGGACTACCTCAAATCTCTCAACTGATCATCTTTCAGAGTGATCAGTAAAGTGATTTGTAAATTGTAAATTAAGAGAAATTGGATGTGTATTGTTTTGTAGGAATACAGGAGATTAAAGCAGGACATTCAGCATGGTATATGCATCTGTGTTTGTGTGTGGGCTGTCTAAAATCGCATGAATTCTGCGTGATTTTCATAGAAATTTGAAATTAAACAATTCAAGTGCATTAGGAGATAGGAAAAAAAATCTAGGTGGTGTTTTTTTTCTAAAGATGAAGATTAAGATTAAGATTAA]
consensusID : consensus_4000#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1470 fasta sequence
[CAGCTCTGTGACTGCGACGCGAACCCATGGCCGCCATGGACGAGCCTCCTCAGCTATTCCTCTGCCCGATCTCCATGGAGCTCATGGAGGATCCGGTGACGGTGTCCACCGGCGTGACGTACGACCGCCGGAGCATCGAGGAGTGGCTCTTCGTCTACGGCCGGACCACCTGCCCGGCCACCATGCAGCCTCTCTCCAACTTCGACCTCACTCCCAACCACACTCTCAAGCGCGTCATCTCGTCGTGGCTCGATCGCGGCTCGTCGTCGTCGTCGTCTTCGTCGCCGTCGACGTCGACGCTGTCGAGCCCGATCCACGAGCTGGCGACGCCGCTGTCGCGCGCGCTGGAGCAGGAGCGGTTGCTGGCTGCGCTGGCCGAGCTGGAGGAGACGCCGTTCAAGGTGACCAAGCTGAAGAGCATGAGGGCCCGCATGGCGGGCGACGTGGCAATGCAGGGGGAGTTCGTCGCCTCGGGCGGGGTGCGCGTGGTGGGGCGCGTGATGGCGCAGGCGCTGGCGGAGAGCGGCGGCGACTTCTCGGCGTTCGCCGCGTGCGAGGAGGCTGCCGCGGTGCTCGCCGCGCTCCCGCTCTCGGACGAGGCGTCGGTGCGGGTCGTCCTTGCGCCGGAGTGCATCAGGCCCGTCATGGCGCTGCTCCAGCGCGGCGGCGCCGAGGCGAGGCTGCACGCCATGGACATCCTCACCAAGATCTCCAGCTCCGGATCAGGCGGCGACTGGACCGCCGGCGTCGACATCGACGACGTGATCAAGTCCCTCCTCGAGCTCCTCTCCGACGAGGCCTCCACGAGGCTCAGCTCGCGCGCGCTCGACGTGCTCCTCGACGTCGTGGAGCGGGCGCGGGGCGCCCGCGCCAAGGCCGTCGAGGTCGGCGCCGTGCACGTCCTCGTCGAGCTCCTCGCCGACGCCGACGACCGCCGCGTCACCGAGCGGGTACTGCTGCTGCTGAAGCGGCTGTGCAAGTGCCCCGAGGGGCGGCTCGCCTTCGCGGAGCACGACCTGTCGGTGGCGGCCGTGGCGAGGACGATGCTGCGCGTGTCGGAGCTGTCCACGCAGCTCGCCGTCAAGGTGCTGTGGCTCGTGTCCGTGGTGGCGCCGTCGGAGAAGGTCCTCGAGGACATGATGCTGACCGGCGCCGTCGCGAAGCTCCTGGGGCTGCTCCACGTCGAGAGCTCGCCGTCGACGAAGCAGAAGACGGTGAGGATGGTTAGGATCCACGGGGTAGTCTGGAGGCAGTACGCGTGCTTCCCTACCGACTTCAGGGACTACCTCAGGCTGCTCGATTGATTCTTTCTCCCCTCTCTTTCTGATTACCGTGGCTAAGCTGTAACAACAAAGCAGATGGAAATTGTGTTTTTTTTTCTGGTCCCTCGAAAAAAAGAATGTGTATTTTTTACAGAAAAAAATCGGAAATGTGTTTTCTCATCACGTACAAAAAAAAGGGAACGTAATG]
[+] EMBL AK110831 [CAGCTCTGTGACTGCGACGCGAACCCATGGCCGCCATGGACGAGCCTCCTCAGCTATTCCTCTGCCCGATCTCCATGGAGCTCATGGAGGATCCGGTGACGGTGTCCACCGGCGTGACGTACGACCGCCGGAGCATCGAGGAGTGGCTCTTCGTCTACGGCCGGACCACCTGCCCGGCCACCATGCAGCCTCTCTCCAACTTCGACCTCACTCCCAACCACACTCTCAAGCGCGTCATCTCGTCGTGGCTCGATCGCGGCTCGTCGTCGTCGTCGTCTTCGTCGCCGTCGACGTCGACGCTGTCGAGCCCGATCCACGAGCTGGCGACGCCGCTGTCGCGCGCGCTGGAGCAGGAGCGGTTGCTGGCTGCGCTGGCCGAGCTGGAGGAGACGCCGTTCAAGGTGACCAAGCTGAAGAGCATGAGGGCCCGCATGGCGGGCGACGTGGCAATGCAGGGGGAGTTCGTCGCCTCGGGCGGGGTGCGCGTGGTGGGGCGCGTGATGGCGCAGGCGCTGGCGGAGAGCGGCGGCGACTTCTCGGCGTTCGCCGCGTGCGAGGAGGCTGCCGCGGTGCTCGCCGCGCTCCCGCTCTCGGACGAGGCGTCGGTGCGGGTCGTCCTTGCGCCGGAGTGCATCAGGCCCGTCATGGCGCTGCTCCAGCGCGGCGGCGCCGAGGCGAGGCTGCACGCCATGGACATCCTCACCAAGATCTCCAGCTCCGGATCAGGCGGCGACTGGACCGCCGGCGTCGACATCGACGACGTGATCAAGTCCCTCCTCGAGCTCCTCTCCGACGAGGCCTCCACGAGGCTCAGCTCGCGCGCGCTCGACGTGCTCCTCGACGTCGTGGAGCGGGCGCGGGGCGCCCGCGCCAAGGCCGTCGAGGTCGGCGCCGTGCACGTCCTCGTCGAGCTCCTCGCCGACGCCGACGACCGCCGCGTCACCGAGCGGGTACTGCTGCTGCTGAAGCGGCTGTGCAAGTGCCCCGAGGGGCGGCTCGCCTTCGCGGAGCACGACCTGTCGGTGGCGGCCGTGGCGAGGACGATGCTGCGCGTGTCGGAGCTGTCCACGCAGCTCGCCGTCAAGGTGCTGTGGCTCGTGTCCGTGGTGGCGCCGTCGGAGAAGGTCCTCGAGGACATGATGCTGACCGGCGCCGTCGCGAAGCTCCTGGGGCTGCTCCACGTCGAGAGCTCGCCGTCGACGAAGCAGAAGACGGTGAGGATGGTTAGGATCCACGGGGTAGTCTGGAGGCAGTACGCGTGCTTCCCTACCGACTTCAGGGACTACCTCAGGCTGCTCGATTGATTCTTTCTCCCCTCTCTTTCTGATTACCGTGGCTAAGCTGTAACAACAAAGCAGATGGAAATTGTGTTTTTTTTTCTGGTCCCTCGAAAAAAAGAATGTGTATTTTTTACAGAAAAAAATCGGAAATGTGTTTTCTCATCACGTACAAAAAAAAGGGAACGTAATG]
consensusID : consensus_4000#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1315 fasta sequence
[AAAGGTCCCTCAATTTGTCATCGAAATACAAAATCGTCCTCCAACCGTAAAACCAGATATACGACATCCCTCAACTTACAAAACCGTTTATTTTATGTCCTTTAATGGTTTTGAACCCAGTTTTCTCTGATGTGGCGGCTGAGTCAGCGTGGGACCCACGTGGGGCCCACCTGTCGGACTGTCCACGCCATCACCTCTCTCCTTCCCCTGTTTTCTCGCCTCCTGCCCTCCTCTCTCTCACTCGAGGCAGGGCGGCACGGGGCCGGAGGCGAGCGCGGTGGTGGGAGGAGGAGGGCGGCGGCCGCCGGGCGACCAGGACGACGGCCATGGAGCCTCCTCCCCTGTTCCAGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCGTCACGGTGGCCACCGGCGTCACCTACGACCGCCGCAGCATGGAGCGGTGGTTCTTCAGGTACGGCAAGACGACGTGCTCCTCCTCGACGCCAACCGCCACGTCGCCGAGCGGTCGCTCCTCCTCCTGAAGCGCCTGTGTAAGTGCCCCGAGGGGCGGCTGGCCTTCGCCTAGCACGGGCTGGCGGTGGCCGCCGTGGCGCGCGCCGTGCTCCGGGTGTCCGGGCTCGCCACGAGGCTGGCCGTCAACGTGCTGTGGCTGGTGGCGTGCGCCCCCACCCCCGCCGAGAGGGTGCTGGAGGACATGGTGGTGGGCGGCGCCGTGGCGAAGCTGCTGGCGCTGATGCAGGTGGAGAGCTCGCCGTCGACCAAGGACAAGGCGGTGAAGATGCTGCGAGCGCACGGCGCGTTCTGGAGGCAGTAGTACCCTTGCTTCCCCACGGACCTCAAGGACTACCTCAAATTTCTCAACTGATCATCTTTCAGAATGATCAGTAAAGTGATTTGTAAATTGTAAAGAGAAATTGGATGTGTATTGTTTTGTAGGAATACAAGAGATTCAAGCAGGACATTGAGCATGGTATATGCATTTGTGTTTGTGTGTGTAATGTTGGGGCTGTCTAAAATCGTATGAATTCTGCGTGATTTTCATAGAAATTTGACAGGAAACAAGTGCATCAGGACATAAGAAAAAAATCTAGCAGATCTTCATGACACTAACTGTAAAAGCTGAGGCGTTTTTCATCCACTAGCAACATGTTAGAACTCGACATGTATGTGTGTTTTGTGCTTTTGTTTACTTGAGCAAAACTAGTACCATTGACTTGGAATCAATACCGAAAATCCTCCTTTTCAAACAAAAAATCCTGTATCGAGGCCTTGAGAGAGGAGCAAAGCGTTGACTTTCGTTGGAAACAACTGAACTTCTCTCAAG]
[-] EMBL AK110959 [AAAGGTCCCTCAATTTGTCATCGAAATACAAAATCGTCCTCCAACCGTAAAACCAGATATACGACATCCCTCAACTTACAAAACCGTTTATTTTATGTCCTTTAATGGTTTTGAACCCAGTTTTCTCTGATGTGGCGGCTGAGTCAGCGTGGGACCCACGTGGGGCCCACCTGTCGGACTGTCCACGCCATCACCTCTCTCCTTCCCCTGTTTTCTCGCCTCCTGCCCTCCTCTCTCTCACTCGAGGCAGGGCGGCACGGGGCCGGAGGCGAGCGCGGTGGTGGGAGGAGGAGGGCGGCGGCCGCCGGGCGACCAGGACGACGGCCATGGAGCCTCCTCCCCTGTTCCAGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCGTCACGGTGGCCACCGGCGTCACCTACGACCGCCGCAGCATGGAGCGGTGGTTCTTCAGGTACGGCAAGACGACGTGCTCCTCCTCGACGCCAACCGCCACGTCGCCGAGCGGTCGCTCCTCCTCCTGAAGCGCCTGTGTAAGTGCCCCGAGGGGCGGCTGGCCTTCGCCTAGCACGGGCTGGCGGTGGCCGCCGTGGCGCGCGCCGTGCTCCGGGTGTCCGGGCTCGCCACGAGGCTGGCCGTCAACGTGCTGTGGCTGGTGGCGTGCGCCCCCACCCCCGCCGAGAGGGTGCTGGAGGACATGGTGGTGGGCGGCGCCGTGGCGAAGCTGCTGGCGCTGATGCAGGTGGAGAGCTCGCCGTCGACCAAGGACAAGGCGGTGAAGATGCTGCGAGCGCACGGCGCGTTCTGGAGGCAGTAGTACCCTTGCTTCCCCACGGACCTCAAGGACTACCTCAAATTTCTCAACTGATCATCTTTCAGAATGATCAGTAAAGTGATTTGTAAATTGTAAAGAGAAATTGGATGTGTATTGTTTTGTAGGAATACAAGAGATTCAAGCAGGACATTGAGCATGGTATATGCATTTGTGTTTGTGTGTGTAATGTTGGGGCTGTCTAAAATCGTATGAATTCTGCGTGATTTTCATAGAAATTTGACAGGAAACAAGTGCATCAGGACATAAGAAAAAAATCTAGCAGATCTTCATGACACTAACTGTAAAAGCTGAGGCGTTTTTCATCCACTAGCAACATGTTAGAACTCGACATGTATGTGTGTTTTGTGCTTTTGTTTACTTGAGCAAAACTAGTACCATTGACTTGGAATCAATACCGAAAATCCTCCTTTTCAAACAAAAAATCCTGTATCGAGGCCTTGAGAGAGGAGCAAAGCGTTGACTTTCGTTGGAAACAACTGAACTTCTCTCAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4000#0 CAAGAAATCGAGCTGCTGCTTTGTTTGATCGCAATGGCAATGGAGCCTCCTCCCCTGTTC 60
consensus_4000#1 -CAGCTCTGTGACTGCGACGCGAACCCATGGCCGCCATGGACGAGCCTCCTCAGCTATTC 59
consensus_4000#2 ------------------------------------------------------------
consensus_4000#0 CTGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCGTCACGGTGGCCACCGGCGTCACC 120
consensus_4000#1 CTCTGCCCGATCTCCATGGAGCTCATGGAGGATCCGGTGACGGTGTCCACCGGCGTGACG 119
consensus_4000#2 ------------------------------------------------------------
consensus_4000#0 TACGACCGCCGGAGCATCGAGCGGTGGTTCTTCAAGTACGGCAAGACGACGTGCCCGGCC 180
consensus_4000#1 TACGACCGCCGGAGCATCGAGGAGTGGCTCTTCGTCTACGGCCGGACCACCTGCCCGGCC 179
consensus_4000#2 ------------------------------------------------------------
consensus_4000#0 ACCATGCAGCGGCTTGCTTCCTTCGACTTCACTCCCAACCACACCCTCAAGCGCGTCATC 240
consensus_4000#1 ACCATGCAGCCTCTCTCCAACTTCGACCTCACTCCCAACCACACTCTCAAGCGCGTCATC 239
consensus_4000#2 ------------------------------------------------------------
consensus_4000#0 TCGTCGTGGCTGGACCGCGCCTCCTCGTCGTCGTCGCCG--AGCACGGCCGGC-TCGCCG 297
consensus_4000#1 TCGTCGTGGCTCGATCGCGGCTCGTCGTCGTCGTCGTCTTCGTCGCCGTCGACGTCGACG 299
consensus_4000#2 ------------------------------------------------------------
consensus_4000#0 GCGACGAC------------GTCGTCGTCGTCGTCGTCAAACGCGATGGAGAGGGAGAGG 345
consensus_4000#1 CTGTCGAGCCCGATCCACGAGCTGGCGACGCCGCTGTCGCGCGCGCTGGAGCAGGAGCGG 359
consensus_4000#2 ------------------------------------------------------------
consensus_4000#0 TTGCCGTCGGTGCTCGCTGGCATTGAGGAGACGCCGTTCAAGGCGACCGCGCTCAAGAAC 405
consensus_4000#1 TTGCTGGCTGCGCTGGCCGAGCTGGAGGAGACGCCGTTCAAGGTGACCAAGCTGAAGAGC 419
consensus_4000#2 ----------------------------AAAGGTCCCTCAATTTGTC---ATCGAAATAC 29
* * * * **** * * ** *
consensus_4000#0 CTCAAGTCCTGCATGGCCGGCGACGAGGCGGCGCGGGAGGATTTCGTGGCGTGCGGCGGC 465
consensus_4000#1 ATGAGGGCCCGCATGGCGGGCGACGTGGCAATGCAGGGGGAGTTCGTCGCCTCGGGCGGG 479
consensus_4000#2 AAAATCGTCCTCCAACCGTAAAACCAGATA-TAC---GACATCCCTCAACTTACAAAACC 85
* * * * ** * * * * * *
consensus_4000#0 ATCCAGGTGCTCGGCCGGGTCATGACGCAGGCGCTGGAGGAGAGCTCCGCCGGGGGGGAC 525
consensus_4000#1 GTGCGCGTGGTGGGGCGCGTGATGGCGCAGGCGCTGGCGGAGAGC------GGCGGCGAC 533
consensus_4000#2 GTTTATTT--TATGTCCTTTAATGGTTTTGAACCCAGTTTTCTCTGA----TGTGGCGGC 139
* * * * * * *** * * * * ** * *
consensus_4000#0 TTC-TCGGCGTTCCGGACGTGCGAGGAGGCCGCC-GCCGTCCTCGCCACGCTGCCGCTCT 583
consensus_4000#1 TTC-TCGGCGTTCGCCGCGTGCGAGGAGGCTGCC-GCGGTGCTCGCCGCGCTCCCGCTCT 591
consensus_4000#2 TGAGTCAGCGT--GGGACCCACGTGGGGCCCACCTGTCGGACTGTCCACGCCATCACCTC 197
* ** **** * ** ** * * ** * * ** ** *** * *
consensus_4000#0 CGGACGACGCGTCGGTGGAGCTCCTGCTCAAGCCGGAGTGCATAAGGCCCGTGTCCGTGC 643
consensus_4000#1 CGGACGAGGCGTCGGTGCGGGTCGTCCTTGCGCCGGAGTGCATCAGGCCCGTCATGGCGC 651
consensus_4000#2 T-------------------CTCCTTCCCCTGTTTTCTCGCCTCCTGCCCTCCTCTCTCT 238
** * * * ** * ****
consensus_4000#0 TGGTCCAG-CGCGGCAGCGCCGAGGCGAGGCTGCACGCAATGTCCATGATCTCCAAGATC 702
consensus_4000#1 TGCTCCAG-CGCGGCGGCGCCGAGGCGAGGCTGCACGCCATGGACATCCTCACCAAGATC 710
consensus_4000#2 CACTCGAGGCAGGGCGGCACGGGGCCGGAGGCGAGCGCGGTGG----------TGGGAGG 288
** ** * *** ** * * * ** * * *** ** **
consensus_4000#0 TCCAGGGCCAGC---GTCCGCGACTGGACCGCGGAGGTCGACGTCGACGACATGGTCAAG 759
consensus_4000#1 TCCAGCTCCGGATCAGGCGGCGACTGGACCGCCGGCGTCGACATCGACGACGTGATCAAG 770
consensus_4000#2 AGGAGGGC-------GGCGGCCGCCGGGCGACCAG-GACGACGGCCATGGAGCCTCCTCC 340
** * * * ** * ** * * * **** * * * *
consensus_4000#0 GCCCTCCTCGAGCTCCTCTCCGACGGCGCCTCCGCGAAGCTGAGCTCCCGCGCGCTCGAC 819
consensus_4000#1 TCCCTCCTCGAGCTCCTCTCCGACGAGGCCTCCACGAGGCTCAGCTCGCGCGCGCTCGAC 830
consensus_4000#2 CCTGTTCCAGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCG-TCACG-GTGGCCACC 398
* * * * ** ** *** * ** * * ** ** * * * *
consensus_4000#0 GTGCTCCTCGACGTCACGGCGCGGTACTCCCGCGGCGCGCGGCGCGCCAAGGCCGTGGAG 879
consensus_4000#1 GTGCTCCTCGACGTCGTGGAGCGGG-----CGCGGGGCGCC-CGCGCCAAGGCCGTCGAG 884
consensus_4000#2 GGCGTCACCTACGAC-CGCCGCAG------CATGGAGCGGT--------GGTTCTTCAGG 443
* ** * *** * * ** * * ** *** * * * *
consensus_4000#0 CTGGGCGCCGTGCGCGTCCTCGCCGAGCTCCTCCTCGACGCCGAC---CGCCACGTCGCC 936
consensus_4000#1 GTCGGCGCCGTGCACGTCCTCGTCGAGCTCCTCGCCGACGCCGACGACCGCCGCGTCACC 944
consensus_4000#2 TACGGCAAGA----------CGACGTGCTCCTCCTCGACGCCAAC---CGCCACGTCGCC 490
*** ** ** ******* ******* ** **** **** **
consensus_4000#0 GAGCGGTCGCTCCTCCTCCTGAAGCGCATGTGCAAGTGCCCCGAGGGGCGGCTGGCCTTC 996
consensus_4000#1 GAGCGGGTACTGCTGCTGCTGAAGCGGCTGTGCAAGTGCCCCGAGGGGCGGCTCGCCTTC 1004
consensus_4000#2 GAGCGGTCGCTCCTCCTCCTGAAGCGCCTGTGTAAGTGCCCCGAGGGGCGGCTGGCCTTC 550
****** ** ** ** ******** **** ******************** ******
consensus_4000#0 GCCGAGCACGGGCTGGCGGTGGCCGCCGTGGCGCGCGCCGTGCTCCGGGTGTCCGGGCTC 1056
consensus_4000#1 GCGGAGCACGACCTGTCGGTGGCGGCCGTGGCGAGGACGATGCTGCGCGTGTCGGAGCTG 1064
consensus_4000#2 GCCTAGCACGGGCTGGCGGTGGCCGCCGTGGCGCGCGCCGTGCTCCGGGTGTCCGGGCTC 610
** ****** *** ******* ********* * * **** ** ***** * ***
consensus_4000#0 GCCACGAGGCTCGCCGTCAACGTGCTGTGGCTGGTGGCGTGCGCCCCGGCCCCCGCCGAG 1116
consensus_4000#1 TCCACGCAGCTCGCCGTCAAGGTGCTGTGGCTCGTG---TCCGTGGTGGCGCCGTCGGAG 1121
consensus_4000#2 GCCACGAGGCTGGCCGTCAACGTGCTGTGGCTGGTGGCGTGCGCCCCCACCCCCGCCGAG 670
***** *** ******** *********** *** * ** * ** * ***
consensus_4000#0 AGGGTGCTGGAGGACATGGTGGTGGGCGGCGCCGTGGCGAAGCTGCTGGCGCTGATGCAA 1176
consensus_4000#1 AAGGTCCTCGAGGACATGATGCTGACCGGCGCCGTCGCGAAGCTCCTGGGGCTGCTCCAC 1181
consensus_4000#2 AGGGTGCTGGAGGACATGGTGGTGGGCGGCGCCGTGGCGAAGCTGCTGGCGCTGATGCAG 730
* *** ** ********* ** ** ********* ******** **** **** * **
consensus_4000#0 GTGGAGAGCTCGCCGTCGACCAAGGACAAGGCGGTGAAGATGCTGCGAGCGCACGGCGCG 1236
consensus_4000#1 GTCGAGAGCTCGCCGTCGACGAAGCAGAAGACGGTGAGGATGGTTAGGATCCACGGGGTA 1241
consensus_4000#2 GTGGAGAGCTCGCCGTCGACCAAGGACAAGGCGGTGAAGATGCTGCGAGCGCACGGCGCG 790
** ***************** *** * *** ****** **** * * ***** *
consensus_4000#0 TTCTGGAGGCAGTA---CCCTTGCTTCCCCACGGACCTCAAGGACTACCTCAAATCTCTC 1293
consensus_4000#1 GTCTGGAGGCAGTA---CGCGTGCTTCCCTACCGACTTCAGGGACTACCTCAGGCTGCTC 1298
consensus_4000#2 TTCTGGAGGCAGTAGTACCCTTGCTTCCCCACGGACCTCAAGGACTACCTCAAATTTCTC 850
************* * * ******** ** *** *** *********** ***
consensus_4000#0 AACTGATCATCTTTCAGAGTGATCAGTAAA-GTGATTTGTAAATTGTAAATTAAGAGAAA 1352
consensus_4000#1 GATTGATTCTTTCTCCCCTCTCTTTCTGATTACCGTGGCTAAGCTGTAACAACAAAGCAG 1358
consensus_4000#2 AACTGATCATCTTTCAGAATGATCAGTAAA-GTGATTTGTAAATTGTAA----AGAGAAA 905
* **** * * ** * * * * *** ***** * ** *
consensus_4000#0 TTGGA---TGTGTATTGTTTTGTAGGAATACAGGAGATTAAAGCAGGACATTCAGCATGG 1409
consensus_4000#1 ATGGAAATTGTGTTTTTTTTTCTGGTCCCTCGAAAAAAAGAATGTGTATTTTTTACAGAA 1418
consensus_4000#2 TTGGA---TGTGTATTGTTTTGTAGGAATACAAGAGATTCAAGCAGGACATTGAGCATGG 962
**** ***** ** **** * * * * * ** * * ** **
consensus_4000#0 TATATGCATCTGTGTTTGTGTGTGGGCTGT---------CTAAAATCGCATGAATTCTGC 1460
consensus_4000#1 AAAAATCGGAAATGTGTTTTCTCATCACGT---------ACAAAAAAAAGGGAACGTAAT 1469
consensus_4000#2 TATATGCATTTGTGTTTGTGTGTGTAATGTTGGGGCTGTCTAAAATCGTATGAATTCTGC 1022
* * * *** * * ** **** ***
consensus_4000#0 GTGATTTTCATAGAAATTTGAAATTAAACAATTCAAGTGCATTAGGAGATAGGAAAAAAA 1520
consensus_4000#1 G----------------------------------------------------------- 1470
consensus_4000#2 GTGATTTTCATAGAAATTTGACAGGAAAC-----AAGTGCATCAGGACATAAGAAAAAAA 1077
*
consensus_4000#0 ATCTAGGTGGTGTTTTTTTTCTAAAGATGAAGATTAAGATTAAGATTAA----------- 1569
consensus_4000#1 ------------------------------------------------------------
consensus_4000#2 TCTAGCAGATCTTCATGACACTAACTGTAAAAGCTGAGGCGTTTTTCATCCACTAGCAAC 1137
consensus_4000#0 ------------------------------------------------------------
consensus_4000#1 ------------------------------------------------------------
consensus_4000#2 ATGTTAGAACTCGACATGTATGTGTGTTTTGTGCTTTTGTTTACTTGAGCAAAACTAGTA 1197
consensus_4000#0 ------------------------------------------------------------
consensus_4000#1 ------------------------------------------------------------
consensus_4000#2 CCATTGACTTGGAATCAATACCGAAAATCCTCCTTTTCAAACAAAAAATCCTGTATCGAG 1257
consensus_4000#0 ----------------------------------------------------------
consensus_4000#1 ----------------------------------------------------------
consensus_4000#2 GCCTTGAGAGAGGAGCAAAGCGTTGACTTTCGTTGGAAACAACTGAACTTCTCTCAAG 1315
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||