These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4001#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 4595 fasta sequence [CCCTTCCTTCCTTCCTTCCTTCCGCCTCGCGTCTCCTCGTCCTCACCTCACCTCGCCTCGTCTTCCTCCTCGCATCGCCCTAGCCCTAGGCCACCTCGCCATTTGATGCGGGGGCGCCCGCCATGGCGTCGTGGGGGCTGGGCTGGAAGCGGAGCTCCGAGATCTTCCACCTCACCCTCGACTACGGGGACCTCGCGGATGGACCTCCTCACCATCACCAGCAGCAGCCGCCGCCGCCGCAGCAGCCGGGCTCCCCTCCCACGCCATCCAGCGCGGGCTCCACGCCGACGTCGTCGTCGTCTTCGCCGACGGCGAGGAGGAGCGGCGGCAGCGGCGAGTTCGGGTTCCGGATCGAGCTCGACTGGTCGGCGGGCGACGACGAGGACCAGGTCGCGCTGCGGCTCCAGTCCCAGCTCATGGTCGCGCTCCCCCCGCCGCACGACGCCGTCTGCGTCGATCTGTCCCCGAGAGGGGAGGGCGACGGCGGCGAGGAGGGTGCGGTGGCGGTGGAGATGCGGGTGGTCAGGAGGCGGGAGGCGCTGCGGTCGGTGCGCGTGGCGCGGGCCGCGGGGTCCGCGGCCGGGAGCGGCGACGGCGCCGGGGTGCTCTCGCGGCTCATCAGATCCAACCTCGCGCCCGCGCCGGCCGTCGACGGTGCCGCTGCCACGGGCGTCCCCGTGCTCGCCGACCACTGGCGCTCCGTCGCCGTGCTCAGCCTCTGCAACTGCGGCTTGCTGATGCTTCCTGTTGAATTAACTCGCCTTGCACTTCTTGAGAAGCTACATCTTGACAACAACAAATTGTCAGTTTTGCCACCTGAAGTTGGTGATTTGAAGAAATTGATAGTGCTGACAGTCGACAACAACATGCTAGTTTCTGTACCTGCAGAACTGCGACAGTGTGTTTTGCTGGAGGAATTATCGTTGGAGAATAATAAGCTTGTCCGCCCATTACTGGATTTCAGGTCAATGCCTAAGTTGCGTGTATTGCGCTTGTTTGGAAATCCTCTAGAGTTTCTCCCAGAAATTTTGCCACTGCATAACCTTAGGCATCTCACACTTGCAAATATTAGAATTGAAGCACTGGAAAGTCTTAGATCTGTCACTGTACAAATTGAGACTGAAAATAATTCCTACTTCGTTGCGGCCAGGCACAAACTTAGTGCCTTCTTTTCACTTGTTTTTCGGTTCTCTTCCTGTCACCACCCTTTGCTAGCCTCTGCTTTGGCCAAAATAATGGAAGATCGTAGCAACCAAGTTGCAATTAGCAAAGAAGAAAATGCTGTCAGGCAGCTTATAAGCATGATAAGCAGTGATAATCGTCATGTGGTTGAGCAAGCATGCCTTGCTCTTTCATCACTGGGATCAGATATTTCATCAGCTATGCTACTTATTAAGTGTGATATCATGAAGCCTATTGAAGCTGTACTGAAATCATTTAATGAAGAAGAATTAGAATCAGTATTGCAAGTTGTAGTCACCTTAACTTTTGTTTCTGATCATGTTGCTCAAAAAATGTTGACGAAAGACGTTCTGAAGTCACTGAAAACACTTTGTGCACACAAGAACTCTGAGGCAAGATGATCTGGATTTAGACTCTGGTTGATGTGTTGTTTCGATACCCACCGGTGAGCTCACTTGTATCTGTTCCCATTTTCTAGGTGCAACGTCTATCTCTATTTGCAGTTGGCAATTTGGCTTTCTGCTTGGAGACTCGTCGCACCCTCATGCACTCTGAAAGTTTGCGCGACCTTTTAATTCGCTTAACTCTTTCACAAGAGAAGCGTGTCAGCAAGGCAGCTGCACGTGCTTTGGCAATTCTAGGTGAGAACGAGAACTTGCGTCGAGCAATAAGAGGAAGACCAGTTGCAAAGAAGGGTCTGCGCATTCTATCAATGGATGGTGGTGGCATGAAAGGCCTTGCGACTGTCCAAATTCTTAAACAGATAGAGCAAGGGACTGGGAAACGCATACATGAAATGTTTGACCTCATATGTGGTACATCGACAGGTGGCATGCTTGCGATGGCTCTTGGAGTCAAGCAGATGACTCTGGATCAATGTGAAGAAATATACACAAAACTTGGCAAACTTGTCTTTGCTGAACCTGCCCCCAAGGATGAAGCTGCAACGTGGAAGGAGAAGATTGATCAGCTTTTTAAAAGTTCATCACAGAGTTTTAGGGTGGTTGTACATGGATCAAAGTGCAGATCAATTTGAGAGGTTACTAAAGGAAATGTGTGCTGATGAAGATGGTGACCTCCTTATAGAGTCTGCTGTAAAAGGCATTCCGAAGGTTTTTGCTGTATCTACTTTAGTCAGTGTCATGCCTGCCCAACCATATATATTCCGAAATTACCAGTACCCACCTGGCACTGTGGAAGTATCATCAGTCATGACAGAAAGCCCATCAATTGGCTCAGCTGGAACGCCCGTTTCTGGTGCCCCGGTCGGTATTAAACCAATTAACACGGTTGGAACTGCTGTTTCTGGTGCACCGGTTGGTATTAAACGTGGTGCTTTCATGGGTAGCTGCAAGCATCGCATATGGGAAGCCATAAGAGCATCTTCTGCAGCTCCATATTATCTGGATGATTTCTCTGATGACGTAAATCGTTGGCAGGATGGAGCTATTGTAGCCAACAATCCCACAATCTTTGCGATAAGAGAGGCACAACTTTTGTGGCCTGATACGAGAATAGATTGTCTAGTTTCAATAGGGTGTGGTTCAGTTCCAACTAAGAGTCGGAGAGGTGGGTGGCGCTACTTGGACACAGGGCAAGTTTTAATAGAAAGTTCATGCTCTGTAGAGAGAGTTGAAGAAACTTTGGATACACTGATACCTATGCTCCCAGAAATGCAGTATTTCCGCTTTAATCCAGTTGATGAGCGGTGTGGTATGGAACTAGATGAGACTGATCCTGCTGTCTGGCTTAAGTTGGAAGCTGCAACTGATGAGTACATTCAGAAAAACTTTCAAGATTTCAAGAATGTTTGTGAGCTTTTAGTTCCAAGATACCAAGAGGAAGAAAAGTCATCTGAAACTACCAAATCAATGTTGTTTTCAAGATTCAAGCCATCAAATTCAGGTTTTAGTGAAAGTAATCCTACCTTAGGATGGAGGCGTGTGGTTTTACTTGTAGAGGCTTCATATAGTCCTGATTTTGGGAAGAAAGTAAATCATGCCCGCTCGCTTGAAACATTCTGCTCCCAGAATGGTATCAGGCTTACTCTAATGAACAGTGCTTCTGGGTTTGGAAAGGCAGCTACCACACTTCCGACTCCAATTACTTCTCCCTTATTTACTGGCAGTTTTCCATCTAGTCCACTTCTATATAGTCCAGAGGGCACCCAAAGAATTGGCCGAATTGACCTGGTTCCGCCGCTTAGCCTGGATGGCAACCCAACTGCAAAGTCCTCGCCGCCAACGTCACCTCTTAAGTCATGGCAGCCATCTGTACATGTTCAATCACTATATGATAAGTTGCAAAATATGCCTCAAGTTGGTGTGATACATATGGCACTTCAAAACGATTCAACTGGCTCAATATTGAGCTGGCAGAATGATGTGTTTGTAGTTGCGGAACCAGGGGAACTTGCAGACAGGTTTCTCCAGTGTGTGAAAACTAGCTTGTCAGCCATGTTGCATGGATGTAAGAGAAAGGGTGCATATTCCTTGTCAAAGATTTCATGTTTGTCTGAGTTGGTTGCAGAGTGGCCGTCGTTTGGAATTGGTGGGATTCACCACCGCTATATAGGGCGCCAAACACAAGTAATGGAAGATAATCAAGAAATTGGTGCCTATATGTTCAGGAGGACAGTGCCTGCTGCTCATATGACACCTGAAGATGTTCGATGGATGGTTGGAGCATGGAGGGAGAGGATCATTGTATGCAGTGGTAAGTATGGCCTTGCTCACGGCCTGGTCAAAGCATTCATGGATTCTGGTGCCAAAGCAGTCATCTCGTCGGCCATGGAGCCTCCAGATTCCCAGTCTATAGTATACCATGGGATGGAAGTAAATGGCAGCCTTGAGAACGGGAAGTTTGTCATTGCCGATGATGAGGCTTCCGAGTCTGAGGCGGAACCTGTTAGCCCTACGAGTGACTGGGAAGACAGCGACATGGAGAAAAATGGCGATCGCAGCAAAGATTTCGATGATGAGGAGTACATGGCTCAGTTCATCTGCCTCCTGTATGACAAGCTGTTCCGCGAGGGCGTGACGGTGGACACGGCGCTCCAGCAAGCGCTCCGGTCACATCCAAAGTTGAAGTACAACTGCCATTTACCCAATGTTTTGTAGGTAGGAGTACATTCACAGTCCTTATAGAAATATATACCAAGATGAATATAGAAGAAGAAAAGAATAATATGATCTGGCGGATTCATGAGGGGGTTTATAGAGTTTATACTCGTAATTTCGTTGTTGAGGCTGTGGTCGCAGACTGTTTGTTTCCCCCAAATGAATCTTTCGGCGAAATGCTGTTTGTAATTCTAGGCTAGTACATAGAACATGTACTGACGGCAACATGGACATAGCAGTTAATCTGAGACAATAAAGGATGAAGTTTTGCTTGCTGTTGCAGTAAAAAAAAAA] [+] EMBL AK120277 [CCCTTCCTTCCTTCCTTCCTTCCGCCTCGCGTCTCCTCGTCCTCACCTCACCTCGCCTCGTCTTCCTCCTCGCATCGCCCTAGCCCTAGGCCACCTCGCCATTTGATGCGGGGGCGCCCGCCATGGCGTCGTGGGGGCTGGGCTGGAAGCGGAGCTCCGAGATCTTCCACCTCACCCTCGACTACGGGGACCTCGCGGATGGACCTCCTCACCATCACCAGCAGCAGCCGCCGCCGCCGCAGCAGCCGGGCTCCCCTCCCACGCCATCCAGCGCGGGCTCCACGCCGACGTCGTCGTCGTCTTCGCCGACGGCGAGGAGGAGCGGCGGCAGCGGCGAGTTCGGGTTCCGGATCGAGCTCGACTGGTCGGCGGGCGACGACGAGGACCAGGTCGCGCTGCGGCTCCAGTCCCAGCTCATGGTCGCGCTCCCCCCGCCGCACGACGCCGTCTGCGTCGATCTGTCCCCGAGAGGGGAGGGCGACGGCGGCGAGGAGGGTGCGGTGGCGGTGGAGATGCGGGTGGTCAGGAGGCGGGAGGCGCTGCGGTCGGTGCGCGTGGCGCGGGCCGCGGGGTCCGCGGCCGGGAGCGGCGACGGCGCCGGGGTGCTCTCGCGGCTCATCAGATCCAACCTCGCGCCCGCGCCGGCCGTCGACGGTGCCGCTGCCACGGGCGTCCCCGTGCTCGCCGACCACTGGCGCTCCGTCGCCGTGCTCAGCCTCTGCAACTGCGGCTTGCTGATGCTTCCTGTTGAATTAACTCGCCTTGCACTTCTTGAGAAGCTACATCTTGACAACAACAAATTGTCAGTTTTGCCACCTGAAGTTGGTGATTTGAAGAAATTGATAGTGCTGACAGTCGACAACAACATGCTAGTTTCTGTACCTGCAGAACTGCGACAGTGTGTTTTGCTGGAGGAATTATCGTTGGAGAATAATAAGCTTGTCCGCCCATTACTGGATTTCAGGTCAATGCCTAAGTTGCGTGTATTGCGCTTGTTTGGAAATCCTCTAGAGTTTCTCCCAGAAATTTTGCCACTGCATAACCTTAGGCATCTCACACTTGCAAATATTAGAATTGAAGCACTGGAAAGTCTTAGATCTGTCACTGTACAAATTGAGACTGAAAATAATTCCTACTTCGTTGCGGCCAGGCACAAACTTAGTGCCTTCTTTTCACTTGTTTTTCGGTTCTCTTCCTGTCACCACCCTTTGCTAGCCTCTGCTTTGGCCAAAATAATGGAAGATCGTAGCAACCAAGTTGCAATTAGCAAAGAAGAAAATGCTGTCAGGCAGCTTATAAGCATGATAAGCAGTGATAATCGTCATGTGGTTGAGCAAGCATGCCTTGCTCTTTCATCACTGGGATCAGATATTTCATCAGCTATGCTACTTATTAAGTGTGATATCATGAAGCCTATTGAAGCTGTACTGAAATCATTTAATGAAGAAGAATTAGAATCAGTATTGCAAGTTGTAGTCACCTTAACTTTTGTTTCTGATCATGTTGCTCAAAAAATGTTGACGAAAGACGTTCTGAAGTCACTGAAAACACTTTGTGCACACAAGAACTCTGAGGCAAGATGATCTGGATTTAGACTCTGGTTGATGTGTTGTTTCGATACCCACCGGTGAGCTCACTTGTATCTGTTCCCATTTTCTAGGTGCAACGTCTATCTCTATTTGCAGTTGGCAATTTGGCTTTCTGCTTGGAGACTCGTCGCACCCTCATGCACTCTGAAAGTTTGCGCGACCTTTTAATTCGCTTAACTCTTTCACAAGAGAAGCGTGTCAGCAAGGCAGCTGCACGTGCTTTGGCAATTCTAGGTGAGAACGAGAACTTGCGTCGAGCAATAAGAGGAAGACCAGTTGCAAAGAAGGGTCTGCGCATTCTATCAATGGATGGTGGTGGCATGAAAGGCCTTGCGACTGTCCAAATTCTTAAACAGATAGAGCAAGGGACTGGGAAACGCATACATGAAATGTTTGACCTCATATGTGGTACATCGACAGGTGGCATGCTTGCGATGGCTCTTGGAGTCAAGCAGATGACTCTGGATCAATGTGAAGAAATATACACAAAACTTGGCAAACTTGTCTTTGCTGAACCTGCCCCCAAGGATGAAGCTGCAACGTGGAAGGAGAAGATTGATCAGCTTTTTAAAAGTTCATCACAGAGTTTTAGGGTGGTTGTACATGGATCAAAGTGCAGATCAATTTGAGAGGTTACTAAAGGAAATGTGTGCTGATGAAGATGGTGACCTCCTTATAGAGTCTGCTGTAAAAGGCATTCCGAAGGTTTTTGCTGTATCTACTTTAGTCAGTGTCATGCCTGCCCAACCATATATATTCCGAAATTACCAGTACCCACCTGGCACTGTGGAAGTATCATCAGTCATGACAGAAAGCCCATCAATTGGCTCAGCTGGAACGCCCGTTTCTGGTGCCCCGGTCGGTATTAAACCAATTAACACGGTTGGAACTGCTGTTTCTGGTGCACCGGTTGGTATTAAACGTGGTGCTTTCATGGGTAGCTGCAAGCATCGCATATGGGAAGCCATAAGAGCATCTTCTGCAGCTCCATATTATCTGGATGATTTCTCTGATGACGTAAATCGTTGGCAGGATGGAGCTATTGTAGCCAACAATCCCACAATCTTTGCGATAAGAGAGGCACAACTTTTGTGGCCTGATACGAGAATAGATTGTCTAGTTTCAATAGGGTGTGGTTCAGTTCCAACTAAGAGTCGGAGAGGTGGGTGGCGCTACTTGGACACAGGGCAAGTTTTAATAGAAAGTTCATGCTCTGTAGAGAGAGTTGAAGAAACTTTGGATACACTGATACCTATGCTCCCAGAAATGCAGTATTTCCGCTTTAATCCAGTTGATGAGCGGTGTGGTATGGAACTAGATGAGACTGATCCTGCTGTCTGGCTTAAGTTGGAAGCTGCAACTGATGAGTACATTCAGAAAAACTTTCAAGATTTCAAGAATGTTTGTGAGCTTTTAGTTCCAAGATACCAAGAGGAAGAAAAGTCATCTGAAACTACCAAATCAATGTTGTTTTCAAGATTCAAGCCATCAAATTCAGGTTTTAGTGAAAGTAATCCTACCTTAGGATGGAGGCGTGTGGTTTTACTTGTAGAGGCTTCATATAGTCCTGATTTTGGGAAGAAAGTAAATCATGCCCGCTCGCTTGAAACATTCTGCTCCCAGAATGGTATCAGGCTTACTCTAATGAACAGTGCTTCTGGGTTTGGAAAGGCAGCTACCACACTTCCGACTCCAATTACTTCTCCCTTATTTACTGGCAGTTTTCCATCTAGTCCACTTCTATATAGTCCAGAGGGCACCCAAAGAATTGGCCGAATTGACCTGGTTCCGCCGCTTAGCCTGGATGGCAACCCAACTGCAAAGTCCTCGCCGCCAACGTCACCTCTTAAGTCATGGCAGCCATCTGTACATGTTCAATCACTATATGATAAGTTGCAAAATATGCCTCAAGTTGGTGTGATACATATGGCACTTCAAAACGATTCAACTGGCTCAATATTGAGCTGGCAGAATGATGTGTTTGTAGTTGCGGAACCAGGGGAACTTGCAGACAGGTTTCTCCAGTGTGTGAAAACTAGCTTGTCAGCCATGTTGCATGGATGTAAGAGAAAGGGTGCATATTCCTTGTCAAAGATTTCATGTTTGTCTGAGTTGGTTGCAGAGTGGCCGTCGTTTGGAATTGGTGGGATTCACCACCGCTATATAGGGCGCCAAACACAAGTAATGGAAGATAATCAAGAAATTGGTGCCTATATGTTCAGGAGGACAGTGCCTGCTGCTCATATGACACCTGAAGATGTTCGATGGATGGTTGGAGCATGGAGGGAGAGGATCATTGTATGCAGTGGTAAGTATGGCCTTGCTCACGGCCTGGTCAAAGCATTCATGGATTCTGGTGCCAAAGCAGTCATCTCGTCGGCCATGGAGCCTCCAGATTCCCAGTCTATAGTATACCATGGGATGGAAGTAAATGGCAGCCTTGAGAACGGGAAGTTTGTCATTGCCGATGATGAGGCTTCCGAGTCTGAGGCGGAACCTGTTAGCCCTACGAGTGACTGGGAAGACAGCGACATGGAGAAAAATGGCGATCGCAGCAAAGATTTCGATGATGAGGAGTACATGGCTCAGTTCATCTGCCTCCTGTATGACAAGCTGTTCCG ] [+] EMBL CB639892 [ AGCCATAAGAGCATCTTCTGCAGCTCCATATTATCTGGATGATTTCTCTGATGACGTAAATCGTTGGCAGGATGGAGCTATTGTAGCCAACAATCCCACAATCTTTGCGATAAGAGAGGCACAACTTTTGTGGCCTGATACGAGAATAGATTGTCTAGTTTCAATAGGGTGTGGTTCAGTTCCAACTAAGAGTCGGAGAGGTGGGTGGCGCTACTTGGACACAGGGCAAGTTTTAATAGAAAGTTCATGCTCTGTAGAGAGAGTTGAAGAAACTTTGGATACACTGATACCAATGCTCCCAGAAATGCAGTATTTCCGCTTTAATCCAGTTGATGAGCGGTGTGGTATGGAACTAGATGAGACTGATCCTGCT ] [-] EMBL CA762089 [ CGGGAAGTTGGTCATTGCCGATGATGAGGCTTCCGAGTCTGAGGCGGAACCTGTTAGCCCTACGAGTGACTGGGAAGACAGCGACATGGAGAAAAATGGCGATCGCAGCAAAGATTTCGATGATGAGGAGTACATGGCTCAGTTCATCTGCCTCCTGTATGACAAGCTGTTCCGCGAGGGCGTGACGGTGGACACGGCGCTCCAGCAAGCGCTCCGGTCACATCCAAAGTTGAAGTACAACTGCCATTTACCCAATGTTTTGTAGGTAGGAGTACATTCACAGTCCTTATAGAAATATATACCAAGATGAATATAGAAGAAGAAAAGAATAATATGATCTGGCGGATTCATGAGGGGGTTTATAGAGTTTATACTCGTAATTTCGTTGTTGAGGCTGTGGTCGCAGACTGTTTGTTTCCCCCAAATGAATCTTTCGGCGAAATGCTGTTTGTAATTCTAGGCTAGTACATAGAACATGTACTGACGGCAACATGGACATAGCAGTTAATCTGAGACAATAAAGGATGAAGTTTTGCTTGCTGTTGCAGTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||