These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4015#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1983 fasta sequence [CACTCCCCCTTCGCGATCTCCTCCGCTCCAAAATGTGGCGCCGCCACCTCCTCCGCCGCCTCCTGCCGTCTCCGGCCACCGCCGCCGCCGCCGCCGCCTCCCCCTCGCCGGCGATCCGCCTCCTATCCACCGCCTCCCCGGATCCCGCCCCGCCGGCGACGCTCGCCTCCTCCCTCGCCGGGGCGCTCTCCGCGCTGTCCTCCACCCCGCCACCGGCCACCTCCCCGGACGCCTACTTCTCCCTCCACTTCTCCGACGTGCGCCCCACCAACGCGCTGCTCGCCGAGGCGCTCGCGCTCGCCCCGCCGGCCACGTCCCGCGCCGCCGCGGAGCTCTTCCGCTTCCTCGTCCGCCGCCGCTCGCTCCACCCCTCCGACTCCGCGCTCGCGCCCGTCGTGCGGCATCTCGCCCGCCGCCGCGACTTCCCCGCGGTGCGCTCGCTCGTCCAGGAGTTCCCCTCCGCGCTGGGGCACGACACGCTCGACGCGTACCTCCTCAGCCTCGCCAGGGCCGGCCGCGCCACCGACGCGGTCAAGGTGTTCGACGAATTGCCCCCGCAGCTCCGCACGCGCCAGGCGCTCACTTCCCTGGTCTCCTCGCTCTCGGCTGAGGGCTGGCCCTCGCACGCGGAAGGCGCTGTCAAGAAGGTCGCTAATGAGATCTTCCCGGATGATAACATCTGCACTCTGTTGGTATCTGGCTATGCCAATGCTGGGAAGCTTGACCATGCTCTGAGGTTGATCGGTGAGACGCGCCGTGGTGGGTTTCAGCCAGGGTTGGACGCCTACAACGCGGTTCTTGATTGTATCTGCCGGCTATGTCGCAAGAAGGACCCGTTGAGGATGCCTGCGGAGGCAGAGAAGTTCTTAGTTGACATGGAGGCCAATGGCATTCCCCGCGATGCAGGTACTTTCCGGGTTCTGATCACTAATCTTTGCAAGATTCGCAAGACTGAGGATGCAATGAATCTGTTCCGGCGAATGGGTGAGTGGGGATGCTCACCAGATGCCGACACCTACTTGGTGCTTATTAAGAGCTTGTATCAGGCTGCCCGGATTTCTGAAGGGGATGAGATGATGACATGGATGCGGTCTGCAGGGTTTGGTGCTAAGCTTGATAGAAAGGCATATTATGGGTTCATCAAGATTTTATGTGGCATTGAAAGGGTTGAGCATGCTGTCAAGGTGTTCAGGATGATGAAAGGATATGGACATGCACCTGGGACAAAGTCATATAGCTTGCTGATTGAGAAGCTGACTAGGCATAACTTAGGAGATCGTGCTAATGCACTGTTCAGGGAAGCAGTGGCACGTGGTGTGACTGTGACGCCAGGAGTGTATAAGATTGATAAGAAGTATGTGAAGGCGAAGAAGGAGAAGAAGGTAAAGAAGAGGCTGACTTTACCAGAGAA-GATGAGATTGAAGAGCAAGAGGCTGTACAAGCTTAGAATGAGCTTTGTTAAGAAGCCTAAGCGTCGAATGGTCCGGGTTTGAGCAGGCTTTGGGTTGGAGCGGATGATCATGGGAAGAGAGAATCAGAAAGAGGCCATTTATAATTTTGAAGAGCAGTAAATTGTCGTCCTTCAATTTTCCCCACA-TTACGAGTGGCTCACTGACCGCAAC-A-TTTTCTGATCGGAGTCCTTCGTGTGGTTTCTATCTCTTGGACAATGGATTGCTGACACTTTGCTGTGCTGTTTTATGTTCTCTGCAATGCCTT-GTGTTTCATTAACACAAATAATGAATGTATCA-TTTTACTTAAGTTTATGTTCACCACAGTTGAGAGGAAACTTTTGGTATATGATGAAGCAACTGTCTTGCAGATCCGTAGTTATCGTTTGAGCAATGTTTTGTACA-CTCTAGTTTCTCATGAACTCATGAAATATTTTATAAAAAGCCTGCCGAAACTACTCATTTGACCTTTTTCTTTGGGTGAGAATGTGCTCCCCAAAAGAGCTTGAATGCATGAGCTTGATCAAAAAAAAAA] [+] EMBL AK063924 [CACTCCCCCTTCGCGATCTCCTCCGCTCCAAAATGTGGCGCCGCCACCTCCTCCGCCGCCTCCTGCCGTCTCCGGCCACCGCCGCCGCCGCCGCCGCCTCCCCCTCGCCGGCGATCCGCCTCCTATCCACCGCCTCCCCGGATCCCGCCCCGCCGGCGACGCTCGCCTCCTCCCTCGCCGGGGCGCTCTCCGCGCTGTCCTCCACCCCGCCACCGGCCACCTCCCCGGACGCCTACTTCTCCCTCCACTTCTCCGACGTGCGCCCCACCAACGCGCTGCTCGCCGAGGCGCTCGCGCTCGCCCCGCCGGCCACGTCCCGCGCCGCCGCGGAGCTCTTCCGCTTCCTCGTCCGCCGCCGCTCGCTCCACCCCTCCGACTCCGCGCTCGCGCCCGTCGTGCGGCATCTCGCCCGCCGCCGCGACTTCCCCGCGGTGCGCTCGCTCGTCCAGGAGTTCCCCTCCGCGCTGGGGCACGACACGCTCGACGCGTACCTCCTCAGCCTCGCCAGGGCCGGCCGCGCCACCGACGCGGTCAAGGTGTTCGACGAATTGCCCCCGCAGCTCCGCACGCGCCAGGCGCTCACTTCCCTGGTCTCCTCGCTCTCGGCTGAGGGCTGGCCCTCGCACGCGGAAGGCGCTGTCAAGAAGGTCGCTAATGAGATCTTCCCGGATGATAACATCTGCACTCTGTTGGTATCTGGCTATGCCAATGCTGGGAAGCTTGACCATGCTCTGAGGTTGATCGGTGAGACGCGCCGTGGTGGGTTTCAGCCAGGGTTGGACGCCTACAACGCGGTTCTTGATTGTATCTGCCGGCTATGTCGCAAGAAGGACCCGTTGAGGATGCCTGCGGAGGCAGAGAAGTTCTTAGTTGACATGGAGGCCAATGGCATTCCCCGCGATGCAGGTACTTTCCGGGTTCTGATCACTAATCTTTGCAAGATTCGCAAGACTGAGGATGCAATGAATCTGTTCCGGCGAATGGGTGAGTGGGGATGCTCACCAGATGCCGACACCTACTTGGTGCTTATTAAGAGCTTGTATCAGGCTGCCCGGATTTCTGAAGGGGATGAGATGATGACATGGATGCGGTCTGCAGGGTTTGGTGCTAAGCTTGATAGAAAGGCATATTATGGGTTCATCAAGATTTTATGTGGCATTGAAAGGGTTGAGCATGCTGTCAAGGTGTTCAGGATGATGAAAGGATATGGACATGCACCTGGGACAAAGTCATATAGCTTGCTGATTGAGAAGCTGACTAGGCATAACTTAGGAGATCGTGCTAATGCACTGTTCAGGGAAGCAGTGGCACGTGGTGTGACTGTGACGCCAGGAGTGTATAAGATTGATAAGAAGTATGTGAAGGCGAAGAAGGAGAAGAAGGTAAAGAAGAGGCTGACTTTACCAGAGAA GATGAGATTGAAGAGCAAGAGGCTGTACAAGCTTAGAATGAGCTTTGTTAAGAAGCCTAAGCGTCGAATGGTCCGGGTTTGAGCAGGCTTTGGGTTGGAGCGGATGATCATGGGAAGAGAGAATCAGAAAGAGGCCATTTATAATTTTGAAGAGCAGTAAATTGTCGTCCTTCAATTTTCCCCACA TTACAAGTGGCTCACTGACCGCAAC ATTTTTCTGATCGGAGTCCTTCGTGTGGTTTCTATCTCTTGGACAATGGATTGCTGACACTTTGCTGTGCTGTTTTATGTTCTCTGCAATGCCTT GTGTTTCATTAACACAAATAATGAATGTATCA TTTTACTTAAGTTTATGTTCACCACAGTTGAGAGGAAACTTTTGGTATATGATGAAGCAACTGTCTTGCAGATCCGTAGTTATCGTTTGAGCAATGTTTTGTACA CTCTAGTTTCTCATGAACTCATGA ] [+] EMBL BM038367 [ TGTGAAGCCGAAGAAGGAGAAGAAGGTAAAGAAGA GCTGACTTTACCAGAGAA GATGAGATTGAAGACCAAGAGCCTGTACAAGCTTAGAATGA CTTT TTAAGAACCCTAAGCGTCGAATGGTCC GGTTTGA CA GCTTTGGGTTGGACCGGATGATCATGGGAAGAGAGAATCAGAAAGA GCCATTTATAATTTTGAAGA CAGTAAATTGTCGTCCTTC ATTTTCCCCACACTTACGAGTGGCTCACTGACC CAAC A TTTTCTGATCGGAGTCCTTCGTGT GTTTCTATCTCTTGGACCATGGATTGCTGACACTTTGCTGTGCTGTTTTATGTTCTCT CCATCCCTTCGTGTTTCATTAACACAAATAATGAATGTATCACTTTTACTTAAGTTTATGTTCACCACAGTTGAGAGGAAACTTTTGGTATATGATGAA C ACTGTCTT CAGATCCGTAGTTATCGTTTGA C ATGTTTTGTACACCTCTAGTTTCTCATGAACTCATGAAATATTTTATAAAAA ] [-] EMBL CA761884 [ ACGAGACAAGGGGGAGATTGAAGAGCAAGAGGCTGTACAAGCTTAGAATGAGCTTTGTTAAGAAGCCTAAGCGTCGAATGGTCCGGGTTTGAGCAGGCTTTGGGTTGGAGCGGATGATCATGGGAAGAGAGAATCAGAAAGAGGCCATTTATAATTTTGAAGAGCAGTAAATTGTCGTCCTTCAATTTTCCCCACA TTACGAGTGGCTCACTGACCGCAACAA TTTTCTGATCGGAGTCCTTCGTGTGGTTTCTATCTCTTGGACAATGGATTGCTGACACTTTGCTGTGCTGTTTTATGTTCTCTGCAATGCCTT GTGTTTCATTAACACAAATAATGAATGTATCA TTTTACTTAAGTTTATGTTCACCACAGTTGAGAGGAAACTTTTGGTATATGATGAAGCAACTGTCTTGCAGATCCGTAGTTATCGTTTGAGCAATGTTTTGTACA CTCTAGTTTCTCATGAACTCATGAAATATTTTATACATCGCCTGCCGAAACTACTCATTTGACCTTTTTCTTTGGGTGAGAATGTGCTCCCCAAAAGAGCTTGAATGCATGAGCTTGATCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||