Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4017 cluster # 4017       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4017#0 length = 2707 sequences # 2  
consensus_4017#1 length = 789 sequences # 1  

consensusID : consensus_4017#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2707
fasta sequence
                              [CCACAGTCCACGCCAACCACCGCCCACCGACAGCCGCGCCCCCACCCACCGCCACCGCCGCCGACGCCGCATGACGGTGTCGCGCGGCCCGCCGGGGCGGCCGGCGGCGTCGTCGGGCTGCCTCGGGTGCTGGAGGAGGCGCCCGCCGCTGGGGTTCGGCGCCAAGGTCACCATCGCCATCGCGCTCGGCCTCTCCTTCGCCATCGTCTGGACCTCCCTCTCCCCGACCTCCTCCTCCCAGCAGATCTCCACCGAGCGCTCCTCCTTCGCCGCCGACATCGTCGACCCTCCCCCCGCCTCCCACAACCATACTGCCACTACCACCACCGCCGCCGCCGCCGCCGGCGGCCACAGGAAGCCCCGCCCCACTACCTCCCGCAGCCACAAGAAGCGCCATCCTCCCGCCGGATCCCACCCCCACCGCCCCAATGCCACCGCCTCGCCGGATTCCACTCCGGCAAACGCGGATCACGCCGTGCAGTCAAAACCCGCCGAGCCGGAGCCGGAGCCAGGGACTGAGCTAGAGGAGGAGGAGGTGGAGCAAGATCAGGAGGAGAAGGAGGCGGAATTGCCCATGCCCGAGGAGAGCGGAGACGGGAAGGCGCCCGAGGAGGAAAGCGAGAAGGCGCCGGGGCTGGAGCTCGACGAGCTCAGCGAGGGAGACGGGTACGGCGAGGAGGCGGAAGAGGGGCAGAAGAAAGCTCCAAAGAAGACGAAGAAGCAGCCGCCCTTGTTCAGCTCGTCTGCACATTACCACTGGAAGCACTGCGGCGCCAAGAGCGGCCACCATTACATCCCTTGTGTGGATTTTGATGGGGATGGGAGCCAGAGGCACCGCGAGCGGAGCTGCCCGAGGTTGCCGGCGACGTGCCTCGTGTCAATGCCCAAGGAGTATAAGCCGCCTGCTCCGTGGCCGGAGAGGAAAGAGAAGGTTTGGTATGGGAATATTGGACATCCTAGGTTGTCAAGTTATGTTAAGGGTCATGGCTGGTTGAACCGGACTGGCGATTACTTGATGTTCCCACCTGATGAGTGGGAATTTAAAGGTGGATCAAGGCATTACGTCGAAGCAATCGATGAGATGGCACCTGACATTGACTGGGGTAAAAATATTCGAGTAGTACTGGATATTGGATGCAAGAGTGCTGGCTTTGGTGTCGCTCTACTTGAGAAGGATGTGATAACACTATCTTTAGGTCTTACGAATGATCAAACTGACCTTGCACAAGTTGCCCTTGAACGTGGCATCCCTGCAACAGTTGGCAGTCTTGGATCAAAAAGGTTACCCTTCCCTAGTGGTGCATTTGATGCTATCCACTGTGGTGATTGCAACATACCATGGCATTCTAATGGTGGAAAGCTTCTCCTAGAGATAAATAGGATCCTTCGTCCAGGAGGATACTTCATTATATCAAGCAAACATGGTGACCTTGAGAGTGAAGAAGGAATATCAGCTTCAATGACTGCTATATGTTGGAATGTAATAGCTTACAACAGTGATGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGATCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATGGTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAGTGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTTGCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCTGGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATTTGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGTTCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGATTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTTGTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCGAATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATTAGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCAGGAAGGACAAGGCGGGCATCATGTCTGTAAAGAAGACGACTTGGCGGCCATGATCTAATCTGTTGATACGAGTCTCCCGACATACCAATTTTGAAGTGGTACAGGCGTACAGCTATTGATTTCTTAATCTGGGTTAAAGATACACGATTGATTCATTGTTTGCACCAACAATATGCTAGCCATCTACTACCTGTTGTAGAATACTTCTGGAGCATCCCAGTTCCAGGCGCGAGGAAGAGACCCTGAAATTCAGGCTGGATACTGAAAAACAGGGTTGTACAAGCTGTAACATTTAGCAATTGTTTGTATTTCTTGTAAATTGTAACAATATGTAAAGATTGCAACAATTGCTTGGTGCTGTTTAAAATTGTAAAAATGTGTGAATACTGTACGTAAGACGAGAACAAAACCTTTTCCTGTATTACTCTCTGCACTTGCTCTTCCACAAGAAAGCATGCAACTCAAATTGCATGTAAAATGTTGGAATACAAACAGTGTTT]

[+] EMBL AK120397             [CCACAGTCCACGCCAACCACCGCCCACCGACAGCCGCGCCCCCACCCACCGCCACCGCCGCCGACGCCGCATGACGGTGTCGCGCGGCCCGCCGGGGCGGCCGGCGGCGTCGTCGGGCTGCCTCGGGTGCTGGAGGAGGCGCCCGCCGCTGGGGTTCGGCGCCAAGGTCACCATCGCCATCGCGCTCGGCCTCTCCTTCGCCATCGTCTGGACCTCCCTCTCCCCGACCTCCTCCTCCCAGCAGATCTCCACCGAGCGCTCCTCCTTCGCCGCCGACATCGTCGACCCTCCCCCCGCCTCCCACAACCATACTGCCACTACCACCACCGCCGCCGCCGCCGCCGGCGGCCACAGGAAGCCCCGCCCCACTACCTCCCGCAGCCACAAGAAGCGCCATCCTCCCGCCGGATCCCACCCCCACCGCCCCAATGCCACCGCCTCGCCGGATTCCACTCCGGCAAACGCGGATCACGCCGTGCAGTCAAAACCCGCCGAGCCGGAGCCGGAGCCAGGGACTGAGCTAGAGGAGGAGGAGGTGGAGCAAGATCAGGAGGAGAAGGAGGCGGAATTGCCCATGCCCGAGGAGAGCGGAGACGGGAAGGCGCCCGAGGAGGAAAGCGAGAAGGCGCCGGGGCTGGAGCTCGACGAGCTCAGCGAGGGAGACGGGTACGGCGAGGAGGCGGAAGAGGGGCAGAAGAAAGCTCCAAAGAAGACGAAGAAGCAGCCGCCCTTGTTCAGCTCGTCTGCACATTACCACTGGAAGCACTGCGGCGCCAAGAGCGGCCACCATTACATCCCTTGTGTGGATTTTGATGGGGATGGGAGCCAGAGGCACCGCGAGCGGAGCTGCCCGAGGTTGCCGGCGACGTGCCTCGTGTCAATGCCCAAGGAGTATAAGCCGCCTGCTCCGTGGCCGGAGAGGAAAGAGAAGGTTTGGTATGGGAATATTGGACATCCTAGGTTGTCAAGTTATGTTAAGGGTCATGGCTGGTTGAACCGGACTGGCGATTACTTGATGTTCCCACCTGATGAGTGGGAATTTAAAGGTGGATCAAGGCATTACGTCGAAGCAATCGATGAGATGGCACCTGACATTGACTGGGGTAAAAATATTCGAGTAGTACTGGATATTGGATGCAAGAGTGCTGGCTTTGGTGTCGCTCTACTTGAGAAGGATGTGATAACACTATCTTTAGGTCTTACGAATGATCAAACTGACCTTGCACAAGTTGCCCTTGAACGTGGCATCCCTGCAACAGTTGGCAGTCTTGGATCAAAAAGGTTACCCTTCCCTAGTGGTGCATTTGATGCTATCCACTGTGGTGATTGCAACATACCATGGCATTCTAATGGTGGAAAGCTTCTCCTAGAGATAAATAGGATCCTTCGTCCAGGAGGATACTTCATTATATCAAGCAAACATGGTGACCTTGAGAGTGAAGAAGGAATATCAGCTTCAATGACTGCTATATGTTGGAATGTAATAGCTTACAACAGTGATGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGATCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATGGTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAGTGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTTGCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCTGGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATTTGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGTTCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGATTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTTGTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCGAATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATTAGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCAGGAAGGACAAGGCGGGCATCATGTCTGTAAAGAAGACGACTTGGCGGCCATGATCTAATCTGTTGATACGAGTCTCCCGACATACCAATTTTGAAGTGGTACAGGCGTACAGCTATTGATTTCTTAATCTGGGTTAAAGATACACGATTGATTCATTGTTTGCACCAACAATATGCTAGCCATCTACTACCTGTTGTAGAATACTTCTGGAGCATCCCAGTTCCAGGCGCGAGGAAGAGACCCTGAAATTCAGGCTGGATACTGAAAAACAGGGTTGTACAAGCTGTAACATTTAGCAATTGTTTGTATTTCTTGTAAATTGTAACAATATGTAAAGATTGCAACAATTGCTTGGTGCTGTTTAAAATTGTAAAAATGTGTGAATACTGTACGTAAGACGAGAACAAAACCTTTTCCTGTATTACTCTCTGCACTTGCTCTTCCACAAGAAAGCATGCAACTCAAATTGCATGTAAAATGTTGGAATACAAACAGTGTTT]
[+] EMBL AU172748             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCCATGATNTAATCTGTTNATACGAGTCTCCCNACATACCAATTTTAAAGTGGTACAGGCGTACAGCTATTGATTTCTTAATCTGGGTTAAAGATACACGATTGATTCATTGTTTGCACCAACAATATGCTAGCCATCTACTACCTGTTGTAGAATACTTCTGGAGCATCCCAGTTCCAGGCGCGAGGAAGAGACCCTGAAATTCAGGCTGGATACTGAAAAACAGGGTTGTNCAAGCTGTAACATTTAGCAATTGTTTGTATTTCTTGTAAATTGTAACAATATGTAAAGATTGCAACAATTGCTTGGTGCTGTTTAAAATTGTAAAAATGTGTGAATACTGTACGTAAGACGAGAACAAAACCTTTTCCTGTATTACTCTCTGCACTTGCTCTTCCACAAGAAAGCATGCAACTCAAATTGCATGTAAAATGTTGGAATACAAAaa      ]


>consensus_4017#0 CCACAGTCCACGCCAACCACCGCCCACCGACAGCCGCGCCCCCACCCACCGCCACCGCCG CCGACGCCGCATGACGGTGTCGCGCGGCCCGCCGGGGCGGCCGGCGGCGTCGTCGGGCTG CCTCGGGTGCTGGAGGAGGCGCCCGCCGCTGGGGTTCGGCGCCAAGGTCACCATCGCCAT CGCGCTCGGCCTCTCCTTCGCCATCGTCTGGACCTCCCTCTCCCCGACCTCCTCCTCCCA GCAGATCTCCACCGAGCGCTCCTCCTTCGCCGCCGACATCGTCGACCCTCCCCCCGCCTC CCACAACCATACTGCCACTACCACCACCGCCGCCGCCGCCGCCGGCGGCCACAGGAAGCC CCGCCCCACTACCTCCCGCAGCCACAAGAAGCGCCATCCTCCCGCCGGATCCCACCCCCA CCGCCCCAATGCCACCGCCTCGCCGGATTCCACTCCGGCAAACGCGGATCACGCCGTGCA GTCAAAACCCGCCGAGCCGGAGCCGGAGCCAGGGACTGAGCTAGAGGAGGAGGAGGTGGA GCAAGATCAGGAGGAGAAGGAGGCGGAATTGCCCATGCCCGAGGAGAGCGGAGACGGGAA GGCGCCCGAGGAGGAAAGCGAGAAGGCGCCGGGGCTGGAGCTCGACGAGCTCAGCGAGGG AGACGGGTACGGCGAGGAGGCGGAAGAGGGGCAGAAGAAAGCTCCAAAGAAGACGAAGAA GCAGCCGCCCTTGTTCAGCTCGTCTGCACATTACCACTGGAAGCACTGCGGCGCCAAGAG CGGCCACCATTACATCCCTTGTGTGGATTTTGATGGGGATGGGAGCCAGAGGCACCGCGA GCGGAGCTGCCCGAGGTTGCCGGCGACGTGCCTCGTGTCAATGCCCAAGGAGTATAAGCC GCCTGCTCCGTGGCCGGAGAGGAAAGAGAAGGTTTGGTATGGGAATATTGGACATCCTAG GTTGTCAAGTTATGTTAAGGGTCATGGCTGGTTGAACCGGACTGGCGATTACTTGATGTT CCCACCTGATGAGTGGGAATTTAAAGGTGGATCAAGGCATTACGTCGAAGCAATCGATGA GATGGCACCTGACATTGACTGGGGTAAAAATATTCGAGTAGTACTGGATATTGGATGCAA GAGTGCTGGCTTTGGTGTCGCTCTACTTGAGAAGGATGTGATAACACTATCTTTAGGTCT TACGAATGATCAAACTGACCTTGCACAAGTTGCCCTTGAACGTGGCATCCCTGCAACAGT TGGCAGTCTTGGATCAAAAAGGTTACCCTTCCCTAGTGGTGCATTTGATGCTATCCACTG TGGTGATTGCAACATACCATGGCATTCTAATGGTGGAAAGCTTCTCCTAGAGATAAATAG GATCCTTCGTCCAGGAGGATACTTCATTATATCAAGCAAACATGGTGACCTTGAGAGTGA AGAAGGAATATCAGCTTCAATGACTGCTATATGTTGGAATGTAATAGCTTACAACAGTGA TGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGA TCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATG GTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAG TGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTT GCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCT GGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATT TGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGT TCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGA TTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTT GTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCG AATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATT AGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCAGGAAGGACAAGGC GGGCATCATGTCTGTAAAGAAGACGACTTGGCGGCCATGATCTAATCTGTTGATACGAGT CTCCCGACATACCAATTTTGAAGTGGTACAGGCGTACAGCTATTGATTTCTTAATCTGGG TTAAAGATACACGATTGATTCATTGTTTGCACCAACAATATGCTAGCCATCTACTACCTG TTGTAGAATACTTCTGGAGCATCCCAGTTCCAGGCGCGAGGAAGAGACCCTGAAATTCAG GCTGGATACTGAAAAACAGGGTTGTACAAGCTGTAACATTTAGCAATTGTTTGTATTTCT TGTAAATTGTAACAATATGTAAAGATTGCAACAATTGCTTGGTGCTGTTTAAAATTGTAA AAATGTGTGAATACTGTACGTAAGACGAGAACAAAACCTTTTCCTGTATTACTCTCTGCA CTTGCTCTTCCACAAGAAAGCATGCAACTCAAATTGCATGTAAAATGTTGGAATACAAAC AGTGTTT



consensusID : consensus_4017#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 789
fasta sequence
                              [GAGGACGAGACAAGGGGGTTGGAATGTAATAGCTTACAACAGTGATGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGATCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATGGTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAGTGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTTGCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCTGGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATTTGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGTTCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGATTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTTGTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCGAATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATTAGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCANGAANGACAAGGCGGGCATCATGTCTGTAAAGAANAC]

[+] EMBL CA767553             [GAGGACGAGACAAGGGGGTTGGAATGTAATAGCTTACAACAGTGATGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGATCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATGGTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAGTGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTTGCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCTGGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATTTGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGTTCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGATTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTTGTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCGAATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATTAGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCANGAANGACAAGGCGGGCATCATGTCTGTAAAGAANAC]


>consensus_4017#1 GAGGACGAGACAAGGGGGTTGGAATGTAATAGCTTACAACAGTGATGATGTCAGTGAAGC TGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGATCTGAGAGCAAAAAA AGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATGGTATACTCTGATCAG ACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAGTGAATGGCCTGAAGA GTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTTGCAAACAAGGGTGGA AGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCTGGATGGATTGGGAAT TGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATTTGGAGGATTTGCTGC TGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGTTCATGCTCCGGACAC TTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGATTGGTGTGAACCATT TAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTTGTTCTCACGCTTGAA CAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCGAATTTTGAGGCCTGG AGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATTAGAGAAAATTCTGAA ATCATTGCATTGGGAAATAGTGATGGCATTCANGAANGACAAGGCGGGCATCATGTCTGT AAAGAANAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4017#0      CCACAGTCCACGCCAACCACCGCCCACCGACAGCCGCGCCCCCACCCACCGCCACCGCCG 60
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CCGACGCCGCATGACGGTGTCGCGCGGCCCGCCGGGGCGGCCGGCGGCGTCGTCGGGCTG 120
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CCTCGGGTGCTGGAGGAGGCGCCCGCCGCTGGGGTTCGGCGCCAAGGTCACCATCGCCAT 180
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CGCGCTCGGCCTCTCCTTCGCCATCGTCTGGACCTCCCTCTCCCCGACCTCCTCCTCCCA 240
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GCAGATCTCCACCGAGCGCTCCTCCTTCGCCGCCGACATCGTCGACCCTCCCCCCGCCTC 300
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CCACAACCATACTGCCACTACCACCACCGCCGCCGCCGCCGCCGGCGGCCACAGGAAGCC 360
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CCGCCCCACTACCTCCCGCAGCCACAAGAAGCGCCATCCTCCCGCCGGATCCCACCCCCA 420
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CCGCCCCAATGCCACCGCCTCGCCGGATTCCACTCCGGCAAACGCGGATCACGCCGTGCA 480
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GTCAAAACCCGCCGAGCCGGAGCCGGAGCCAGGGACTGAGCTAGAGGAGGAGGAGGTGGA 540
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GCAAGATCAGGAGGAGAAGGAGGCGGAATTGCCCATGCCCGAGGAGAGCGGAGACGGGAA 600
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GGCGCCCGAGGAGGAAAGCGAGAAGGCGCCGGGGCTGGAGCTCGACGAGCTCAGCGAGGG 660
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      AGACGGGTACGGCGAGGAGGCGGAAGAGGGGCAGAAGAAAGCTCCAAAGAAGACGAAGAA 720
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GCAGCCGCCCTTGTTCAGCTCGTCTGCACATTACCACTGGAAGCACTGCGGCGCCAAGAG 780
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CGGCCACCATTACATCCCTTGTGTGGATTTTGATGGGGATGGGAGCCAGAGGCACCGCGA 840
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GCGGAGCTGCCCGAGGTTGCCGGCGACGTGCCTCGTGTCAATGCCCAAGGAGTATAAGCC 900
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GCCTGCTCCGTGGCCGGAGAGGAAAGAGAAGGTTTGGTATGGGAATATTGGACATCCTAG 960
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GTTGTCAAGTTATGTTAAGGGTCATGGCTGGTTGAACCGGACTGGCGATTACTTGATGTT 1020
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CCCACCTGATGAGTGGGAATTTAAAGGTGGATCAAGGCATTACGTCGAAGCAATCGATGA 1080
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GATGGCACCTGACATTGACTGGGGTAAAAATATTCGAGTAGTACTGGATATTGGATGCAA 1140
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GAGTGCTGGCTTTGGTGTCGCTCTACTTGAGAAGGATGTGATAACACTATCTTTAGGTCT 1200
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      TACGAATGATCAAACTGACCTTGCACAAGTTGCCCTTGAACGTGGCATCCCTGCAACAGT 1260
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      TGGCAGTCTTGGATCAAAAAGGTTACCCTTCCCTAGTGGTGCATTTGATGCTATCCACTG 1320
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      TGGTGATTGCAACATACCATGGCATTCTAATGGTGGAAAGCTTCTCCTAGAGATAAATAG 1380
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GATCCTTCGTCCAGGAGGATACTTCATTATATCAAGCAAACATGGTGACCTTGAGAGTGA 1440
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      AGAAGGAATATCAGCTTCAATGACTGCTATATGTTGGAATGTAATAGCTTACAACAGTGA 1500
consensus_4017#1      ---------------GAGGACGAGACAAGGGGGTTGGAATGTAATAGCTTACAACAGTGA 45
                                         * **         ****************************

consensus_4017#0      TGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGA 1560
consensus_4017#1      TGATGTCAGTGAAGCTGGAGTGAAGATATTCCAACGACCACCTTCCAATGATGAATATGA 105
                      ************************************************************

consensus_4017#0      TCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATG 1620
consensus_4017#1      TCTGAGAGCAAAAAAAGATCCACCATTTTGTAAGGAAGACCAGAACAAAGCTCCTGCATG 165
                      ************************************************************

consensus_4017#0      GTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAG 1680
consensus_4017#1      GTATACTCTGATCAGACATTGCCTGCATAAAGCTCCTGTTGGCATTGAAGAACGAGGCAG 225
                      ************************************************************

consensus_4017#0      TGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTT 1740
consensus_4017#1      TGAATGGCCTGAAGAGTGGCCCAAGAGGATTGAGACTTTTCCTGAGTGGCTTGGGGACTT 285
                      ************************************************************

consensus_4017#0      GCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCT 1800
consensus_4017#1      GCAAACAAGGGTGGAAGCTGATCATAAACATTGGAAGGCTGTTGTTGAGAAATCATATCT 345
                      ************************************************************

consensus_4017#0      GGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATT 1860
consensus_4017#1      GGATGGATTGGGAATTGATTGGTCAAATATCCGAAATGTTCTGGATATGAGAGCTGTATT 405
                      ************************************************************

consensus_4017#0      TGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGT 1920
consensus_4017#1      TGGAGGATTTGCTGCTGCACTGGCATCGAAAAAAGTTTGGGTCATGAATGTTGTTCCTGT 465
                      ************************************************************

consensus_4017#0      TCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGA 1980
consensus_4017#1      TCATGCTCCGGACACTTTACCCATAATCTACGAGCGTGGGCTGATTGGTGTCTACCATGA 525
                      ************************************************************

consensus_4017#0      TTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTT 2040
consensus_4017#1      TTGGTGTGAACCATTTAGCACATACCCAAGGTCATATGATCTTCTACATGCTGACCACTT 585
                      ************************************************************

consensus_4017#0      GTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCG 2100
consensus_4017#1      GTTCTCACGCTTGAACAACAGATGCAAGCAACCTGTCTCAATCGTGGTTGAGATGGACCG 645
                      ************************************************************

consensus_4017#0      AATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATT 2160
consensus_4017#1      AATTTTGAGGCCTGGAGGTTGGGCCATCATCAGAGAGAAGCTTGAGATCCTTGATCCATT 705
                      ************************************************************

consensus_4017#0      AGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCAGGAAGGACAAGGC 2220
consensus_4017#1      AGAGAAAATTCTGAAATCATTGCATTGGGAAATAGTGATGGCATTCANGAANGACAAGGC 765
                      *********************************************** *** ********

consensus_4017#0      GGGCATCATGTCTGTAAAGAAGACGACTTGGCGGCCATGATCTAATCTGTTGATACGAGT 2280
consensus_4017#1      GGGCATCATGTCTGTAAAGAANAC------------------------------------ 789
                      ********************* **                                    

consensus_4017#0      CTCCCGACATACCAATTTTGAAGTGGTACAGGCGTACAGCTATTGATTTCTTAATCTGGG 2340
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      TTAAAGATACACGATTGATTCATTGTTTGCACCAACAATATGCTAGCCATCTACTACCTG 2400
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      TTGTAGAATACTTCTGGAGCATCCCAGTTCCAGGCGCGAGGAAGAGACCCTGAAATTCAG 2460
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      GCTGGATACTGAAAAACAGGGTTGTACAAGCTGTAACATTTAGCAATTGTTTGTATTTCT 2520
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      TGTAAATTGTAACAATATGTAAAGATTGCAACAATTGCTTGGTGCTGTTTAAAATTGTAA 2580
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      AAATGTGTGAATACTGTACGTAAGACGAGAACAAAACCTTTTCCTGTATTACTCTCTGCA 2640
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      CTTGCTCTTCCACAAGAAAGCATGCAACTCAAATTGCATGTAAAATGTTGGAATACAAAC 2700
consensus_4017#1      ------------------------------------------------------------
                                                                                  

consensus_4017#0      AGTGTTT 2707
consensus_4017#1      -------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)