These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4029#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1999 fasta sequence [GCCTTCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCTCGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCCGAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCCTCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCCTCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCCGCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTCTCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTGAGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGGCTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCATGAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCACCCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCCACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGTCGCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAGGACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAGGAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTCACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACTACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACATGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAACATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTATGAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTGCTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTTGAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAACTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAGCTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGTTTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCTAGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGTAGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGAATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTGTTTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACATACATGAAGATTTCTTT] [+] EMBL AK120476 [GCCTTCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCTCGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCCGAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCCTCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCCTCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCCGCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTCTCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTGAGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGGCTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCATGAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCACCCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCCACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGTCGCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAGGACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAGGAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTCACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACTACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACATGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAACATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTATGAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTGCTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTTGAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAACTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAGCTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGTTTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCTAGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGTAGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGAATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTGTTTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACATACATGAAGATTTCTTT] [+] EMBL AK073922 [ TCCCCGGCTTTGACTCACAGACTCCACGTCTCCACCCCGAATCTCACTTCCCGTCTCGCCCCCGCCCCCAATCCTCACCGCCGCCGCCCGGGCCAGCCATGGTGGGCGCCGACGCCGAGTCCTCGGCGGTGGTCGACGCCGGCGAGGGCCACGGAGACCTGGCCCTCGATTCCTCCTCCGCTGCCTCCACCGACCCTCTGCTCCACCCGCCGCCGTCCCCTTCCTCCACCCCCTCCTCTCCCACCGCGATCGCCGACCACGACGCGTTCATCGAGGAAGACGGCGAGGATGACTCCGCGCCCCACGTCCCATCCGCTTCCGACGAGGCGGCCCCGGAGTTCGTCCAGATCACCGTCTCCGAGCCTAAGAAGCACGCGGAGCCGGCCGCGGGGGCAGCGGGGGTCATTCCTGGCTCCGGGAGCTACTTCTCCTACCTCATCACCACCAGGGCGGCCGACGGCGGCCTGTTCCGCGTGAGGCGGCGCTTCCGCGACGTCGTCGCCCTCGCGGACCGCCTCGCGGCGGCCTACCGGGGGCTCTTCGTCCCGGCGCGACCAGACAAGAGCATCGTCGAGGGGCAGGTCATGCAGCGGCATGAGTTCGTGAACCAGCGCTGCGCCGCGCTCCAGCGCTACCTCGGCCGCCTTGCCGCGCACCCCACCATCGGCCGCAGCGCCGAACTCCATGACTTCCTGACTGAGCCAAGCGGCATTCCCACCTCCGCGGGCGAGTCACCCAGATCGGATCCCGCGTTGAGTGCTGCCATGTCCGCGGCCGCCGTTACCGCTCCAACGGCGCCTGCAAAGCCTGGGAGAGATATTTTTGGGATGTTTAAGGACCTGAAGCAGACGGTGGCGAATGGATTGGTGGCAGTGAGGCCGCCTCCAGTGGAGGAGGAAACTGATGCAAAGTTCGTCATGCACAAGGCCAAGCTGGAGTACTTCGAGCAGCATCTCACGACGGCATCTCAGCAGGTAGAGGCTCTTCTTAAAGCTTATGATGATCTTAAAGCAACTACAGGTCAACTGGGAATGACATTCATTAAGCTGGCAAAGTTTGAAAAGGAGCAGGATACATGTAATTCTCAGAGAAAAAGAGCTGTTGATATGAGCAATTTCGCAAATGCTGTTATCAACATGAGCAGATCACAGACAAAACTAAATGCTAAAATTGAAATACATCTGGGCACTATCTATGAATACTTGGAGACAATGACTTCTGTTCGTAATGCATTTACTGATCGCGCAAATGCTTTGCTTCGTGTGCAAAGTCTGTCAGGAGATTTATTTCTCTTGCATACTCAGGCAGCAAAACTTGAGTCCGTATCATCCAGAGGAATGGGCCAGGAAAGATTAAGATACCAAAAGATTGAAGAACTGAAAGAAACAATAAGAAAAACAGAAGATGCAAAAGGCAATGCACGCCAGGAATATGAGCTTATCAAGGAAAACAACATGAATGAGATCATAAGGTTTAACAAAGAAAAACGCCATGGTTTGGTTGAGATGCTGAAAGGCTTTGTAAGAAATCAGGTTTCATACTCAGAGCATATTTCTAGTATATGGACAAAGGTAGCAGAAGAAACCACAGGATATACAGGCAAGGGCAGCTGAAGTAGGATGTAAATATGCATGTGAATTTTAGCCTTTTATCTGCAGATCAACATCAGTTACAGAATTCGAAATCGTCTTATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCTAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTGTTTTTTTTTCCCAGTCC TTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACATACATGAAGATTTCT ] [-] EMBL BI306731 [ TATAGCTCAACACAGTGGTATAGAGTATAGACTATAAACAGAGATGTCACACTTCCCTCCATCCAAAGGGCGTCGGATCTGTGATTTTTCTGGAGATGGTATCTCCGGCTGTTTAGGCGTATAGCAGAATTTTCCAGGAAAGAGAATCAAATGATCAGCAAACCAACACAACTG TTTTTTTTCCCAGTCCTTTTTTTTTCCACCCTGGGCTTTACAGTAATGTAATGTTGAGTTTCTGTACACGAAACTAGATTAGCTGGAATTTTCTGGTTCCTGAGAGAACCACA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||