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Oryza sativa
cluster # 4039 cluster # 4039       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4039#0 length = 755 sequences # 3  

consensusID : consensus_4039#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 755
fasta sequence
                              [TACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGACGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTCGGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGGCGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCGAGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGAACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGAC-GATGCCCGACTCGAATTGACGGCCGGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAGATGAATTAATCAGGACATCAGTTTGAATTCAAAAA]

[+] EMBL AK120501             [TACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGACGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTCGGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGGCGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCGAGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGAACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGAC GATGCCCGACTCGAATTGACGGCCGGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAGATGA                               ]
[+] EMBL OSS16373A            [                                          AGACGAAGAAGATGGCGACGACTTCTCGGCNGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAAGAGCANCAGCAGATGGAGAGGTTCTACGCGCTCNTNGCCAACNTTCGGGCCCTNANAGCCATGTTCAAGGAGGCAGCNCTGCCCAGCTGCCGCAAAGACGACGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTNGCGGCCGGCNTTCGAAATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCNAGGCGGCGACGACCAAGGGCCANGACGGCAACTTCAAGAAGGGGAAGAGGAGCna                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU101863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGACNGATGCCCGACTCGAATTGAC GCCGGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAGATGAATTAATCAGGACATCAGTTTGAATTCAAAAA]


>consensus_4039#0 TACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGA CGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGA CGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTC GGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTA GCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGG CGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCG AGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGA ACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCA TCGTCGCTGACGGGCCTGGTAAGTCGACGACGATGCCCGACTCGAATTGACGGCCGGCCG GCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTT CATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTAT ATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAG ATGAATTAATCAGGACATCAGTTTGAATTCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)