cluster # 4049

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Oryza sativa
cluster # 4049 cluster # 4049 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4049#0 length = 1985 sequences # 3
consensusID : consensus_4049#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1985
fasta sequence
                              [TCTCTCTCCTTCGGCTCATTCGTCACTGTTCCACCGCCGGCTTCGCCAGTTGCCTGGCCGTGTCCGGCCACTCCCAGGAGGAGGAGGAGGACAATGGCGGATGCTTGGGCGGCGTCCCCTCCATCTCCTACGGCTCCTTCGCCTTTCGCCGCGGACGACCTCGTCGACGCGCGGCTCGCGCCGTGGCCGCCGTTCGCTCCGTGGCCGGCGCCCGGGCAGCTCCACCACAACCGCCGCGGCGGCGGGCACCCGAACCCGCTCTTCACCATCCTGCCGGCCTCGGCGCTGGCAATAGGGGTCGTGCTGCTTGTCGCCGTGGTCGTCATCCTGGTGATGACGCGTCGGTGGAAGCCCGGGACGGTGGACGGCGCCGGCGGCGCCAGCTGCAACGGCGACAAGCCTGGCGGCGCCCCCGCGTCCAGCTGCGGCAGCAGCGTCCGCGGCTACAACAACTCCAGGTACTACGCCGCCGCCGCCGCCGGGTGCATATATGGCGGAAGGCTGGGTTTCTCGGTGCAGCCGCGGAACCGCGGCGCGCAAGTGTTCACGTACCGGGAGCTGGAGAGCGCGACGGACGGGTTCAGCGAGTGCAACGTGGTGGGCCGCGGCGCGTACGGCGTGGTCTTCCGCGGCCGGCTCGGCGACGGCACCACGGCCGCCATCAAGCGGCTCAAGATGGACGGCCGGCGCGAGGGCGAGCGCGAGTTCCGCATCGAGGTCGACCTGCTGAGCCGGATGCACTCGCCGTACCTGGTGGGGTTGCTGGGCTACTGCGCCGACCAGAGCCACCGTCTGCTGGTGTTCGAGTTCATGCCCAACGGCAGCCTCAAGAGCCACCTCCACCGGCGCGCGCTGGCGCCGGCGGAGCAGCCGCCGCCGCTGGACTGGCAGACGCGGCTGGGCATCGCGCTGGACTGCGCCCGCGCGCTGGAGTTCCTCCACGAGCACAGCTCCCCCGCCGTGATCCACCGCGACTTCAAGTGCAGCAACATCCTCCTCGACCACAACTACCGCGCCCGCGTCTCCGACTTCGGCATGGCCAAGCTCGGCTCCAACAAGGCCAATGGCCAGGTCACCACCCGCGTCCTCGGCACCACCGGCTACCTCGCCCCAGAGTACGCGTCGACGGGGAAGCTGACGACAAAGTCGGACGTGTACAGCTACGGCGTCGTGCTCCTCGAGCTGCTCACTGGGCGGGTGCCCGTCGACACGAAGCGGCCGCCGGGACAGCACGTACTCGTCTCGTGGGCCCTTCCGCGGCTGACGAACCGCGAGAAGCTCGTGCAGATGGTGGATCCTGCCCTGATAGGCCAGTTCTCCCTCAAAGATCTGGTCCAGGTGGCCGCCATCACGGCGATGTGCATACAGACGAAGGCGGACTACCGGCCGCTGATGACGGACGTGGTGCAGTCGCTGATCCCCATCGTGAAGAGCCCACTCATGTCCTGCACCTCCACGCCGCTGAGGCCCGCGCACGGGCACCACCACGTCGTCTGCATGAGCCCGAGCAGGGGCTCTTCCAACGGCGGTGCCCTGGAAACGCGATGCGTCATGCACGGCTTGGATTGATTAGCCATATGCATCTCGATCAGCTGCAGATATATAATGCTAGCTCCTATGTATTACTACGTCTCGATCGTCGATCGCTTGCTTGGAGTACTTTGAGCCAGGCAGATGGGGAAGAAGAGATGGATGGTCAGCTTGTCAAGCTGCTCGATCGGAGGGAGATTGCTGGCACTACTCCCAGCTGTGTATAGAACGGTACCAGTACCACTTCACCAAGCTCATCACGGCTTGCTTGCAAGACATCCTTGCAAATGCAATTGCAGATTTGCTGTAGCAGTACATCATCACGTGCGTACGATTGTACTATTTATTAGGGACAGTTGTACGACGATTCCTTGTTCTTTTGTACGAAATCATATATATTCATATATTCCTGTATAAGATAGTAATTAAGATGGAAAAAATACAATAAATGGATC]

[+] EMBL AK106842             [TCTCTCTCCTTCGGCTCATTCGTCACTGTTCCACCGCCGGCTTCGCCAGTTGCCTGGCCGTGTCCGGCCACTCCCAGGAGGAGGAGGAGGACAATGGCGGATGCTTGGGCGGCGTCCCCTCCATCTCCTACGGCTCCTTCGCCTTTCGCCGCGGACGACCTCGTCGACGCGCGGCTCGCGCCGTGGCCGCCGTTCGCTCCGTGGCCGGCGCCCGGGCAGCTCCACCACAACCGCCGCGGCGGCGGGCACCCGAACCCGCTCTTCACCATCCTGCCGGCCTCGGCGCTGGCAATAGGGGTCGTGCTGCTTGTCGCCGTGGTCGTCATCCTGGTGATGACGCGTCGGTGGAAGCCCGGGACGGTGGACGGCGCCGGCGGCGCCAGCTGCAACGGCGACAAGCCTGGCGGCGCCCCCGCGTCCAGCTGCGGCAGCAGCGTCCGCGGCTACAACAACTCCAGGTACTACGCCGCCGCCGCCGCCGGGTGCATATATGGCGGAAGGCTGGGTTTCTCGGTGCAGCCGCGGAACCGCGGCGCGCAAGTGTTCACGTACCGGGAGCTGGAGAGCGCGACGGACGGGTTCAGCGAGTGCAACGTGGTGGGCCGCGGCGCGTACGGCGTGGTCTTCCGCGGCCGGCTCGGCGACGGCACCACGGCCGCCATCAAGCGGCTCAAGATGGACGGCCGGCGCGAGGGCGAGCGCGAGTTCCGCATCGAGGTCGACCTGCTGAGCCGGATGCACTCGCCGTACCTGGTGGGGTTGCTGGGCTACTGCGCCGACCAGAGCCACCGTCTGCTGGTGTTCGAGTTCATGCCCAACGGCAGCCTCAAGAGCCACCTCCACCGGCGCGCGCTGGCGCCGGCGGAGCAGCCGCCGCCGCTGGACTGGCAGACGCGGCTGGGCATCGCGCTGGACTGCGCCCGCGCGCTGGAGTTCCTCCACGAGCACAGCTCCCCCGCCGTGATCCACCGCGACTTCAAGTGCAGCAACATCCTCCTCGACCACAACTACCGCGCCCGCGTCTCCGACTTCGGCATGGCCAAGCTCGGCTCCAACAAGGCCAATGGCCAGGTCACCACCCGCGTCCTCGGCACCACCGGCTACCTCGCCCCAGAGTACGCGTCGACGGGGAAGCTGACGACAAAGTCGGACGTGTACAGCTACGGCGTCGTGCTCCTCGAGCTGCTCACTGGGCGGGTGCCCGTCGACACGAAGCGGCCGCCGGGACAGCACGTACTCGTCTCGTGGGCCCTTCCGCGGCTGACGAACCGCGAGAAGCTCGTGCAGATGGTGGATCCTGCCCTGATAGGCCAGTTCTCCCTCAAAGATCTGGTCCAGGTGGCCGCCATCACGGCGATGTGCATACAGACGAAGGCGGACTACCGGCCGCTGATGACGGACGTGGTGCAGTCGCTGATCCCCATCGTGAAGAGCCCACTCATGTCCTGCACCTCCACGCCGCTGAGGCCCGCGCACGGGCACCACCACGTCGTCTGCATGAGCCCGAGCAGGGGCTCTTCCAACGGCGGTGCCCTGGAAACGCGATGCGTCATGCACGGCTTGGATTGATTAGCCATATGCATCTCGATCAGCTGCAGATATATAATGCTAGCTCCTATGTATTACTACGTCTCGATCGTCGATCGCTTGCTTGGAGTACTTTGAGCCAGGCAGATGGGGAAGAAGAGATGGATGGTCAGCTTGTCAAGCTGCTCGATCGGAGGGAGATTGCTGGCACTACTCCCAGCTGTGTATAGAACGGTACCAGTACCACTTCACCAAGCTCATCACGGCTTGCTTGCAAGACATCCTTGCAAATGCAATTGCAGATTTGCTGTAGCAGTACATCATCACGTGCGTACGATTGTACTATTTATTAGGGACAGTTGTACGACGATTCCTTGTTCTTTTGTACGAAATCATATATATTCATATATTCCTGTATAAGATAGTAATTAAGATGGAAAAAATACAATAAATGGATC]
[+] EMBL CB641277             [                                                                 GGCCACTCCCAGGAGGAGGAGGAGGACAATGGCGGATGCTTGGGCGGCGTCCCCTCCATCTCCTACGGCTCCTTCGCCTTTCGCCGCGGACGACCTCGTCGACGCGCGGCTCGCGCCGTGGCCGCCGTTCGCTCCGTGGCCGGCGCCCGGGCAGCTCCACCACAACCGCCGCGGCGGCGGGCACCCGAACCCGCTCTTCACCATCCTGCCGGCCTCGGCGCTGGCAATAGGGGTCGTGCTGCTTGTCGCCGTGGTCGTCATCCTGGTGATGACGCGTCGGTGGAAGCCCGGGACGGTGGACGGCGCCGGCGGCGCCAGCTGCAACGGCGACAAGCCTGGCGGCGCCCCCGCGTCCAGCTGCGGCAGCAGCGTCCGCGGCTACAACAACTCCAGGTACTACGCCGCCGTCGCCGTCGGGTGCATATATGGCGGAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB966116             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACGTACTCGTCTCGTGTGCCCTTCCGCGGCTGACGAACCGCGAGAAGCTCGTGCAGATGGTGGATCCTGCCCTGATAGGCCAGTTCTCCCTCAAAGATCTGGTCCAGGTGGCCGCCATCACGGCGATGTGCATACAGACGAAGGCGGACTACCGGCCGCTGATGACGGACGTGGTGCAGTCGCTGATCCCCATCGTGAAGAGCCCACTCATGTCCTGCACCTCCACGCCGCTGAGGCCCGCGCACGGGCACCACCACGTCGTCTACATGAGCCCGAGCAGGGGCTCTTCCAACGGCGGTGCCCTGGAAACGCGATGCGTCATGCACGGCTTGGATTGATTAGCCATATGCATCTCGATCAGCTGCAGATATATAATGCTAGCTCCTATGTATTACTACGTCTCGATCGTCGATCGCTTGCTTGGAGTACTTTGAGCCAGGCAGATGGGGAAGAAGAGATGGATGGTCAGCTTGTCAAGCTGCTCGATCGGAGGGAGATTGCTGGCACTACTCCCAGCTGTGTATAGAACGGTACCAGTACCACTTCACCAAGCTCATCACGGCTTGCTTGCCAGACATCCTTGCAAATGCAATTGCAGATTTGCTGTAGCAGTACATCATCACGTGCGTACGATTGTACTATTTATTAGGGACAGTTGT                                                                                               ]




>consensus_4049#0
TCTCTCTCCTTCGGCTCATTCGTCACTGTTCCACCGCCGGCTTCGCCAGTTGCCTGGCCG
TGTCCGGCCACTCCCAGGAGGAGGAGGAGGACAATGGCGGATGCTTGGGCGGCGTCCCCT
CCATCTCCTACGGCTCCTTCGCCTTTCGCCGCGGACGACCTCGTCGACGCGCGGCTCGCG
CCGTGGCCGCCGTTCGCTCCGTGGCCGGCGCCCGGGCAGCTCCACCACAACCGCCGCGGC
GGCGGGCACCCGAACCCGCTCTTCACCATCCTGCCGGCCTCGGCGCTGGCAATAGGGGTC
GTGCTGCTTGTCGCCGTGGTCGTCATCCTGGTGATGACGCGTCGGTGGAAGCCCGGGACG
GTGGACGGCGCCGGCGGCGCCAGCTGCAACGGCGACAAGCCTGGCGGCGCCCCCGCGTCC
AGCTGCGGCAGCAGCGTCCGCGGCTACAACAACTCCAGGTACTACGCCGCCGCCGCCGCC
GGGTGCATATATGGCGGAAGGCTGGGTTTCTCGGTGCAGCCGCGGAACCGCGGCGCGCAA
GTGTTCACGTACCGGGAGCTGGAGAGCGCGACGGACGGGTTCAGCGAGTGCAACGTGGTG
GGCCGCGGCGCGTACGGCGTGGTCTTCCGCGGCCGGCTCGGCGACGGCACCACGGCCGCC
ATCAAGCGGCTCAAGATGGACGGCCGGCGCGAGGGCGAGCGCGAGTTCCGCATCGAGGTC
GACCTGCTGAGCCGGATGCACTCGCCGTACCTGGTGGGGTTGCTGGGCTACTGCGCCGAC
CAGAGCCACCGTCTGCTGGTGTTCGAGTTCATGCCCAACGGCAGCCTCAAGAGCCACCTC
CACCGGCGCGCGCTGGCGCCGGCGGAGCAGCCGCCGCCGCTGGACTGGCAGACGCGGCTG
GGCATCGCGCTGGACTGCGCCCGCGCGCTGGAGTTCCTCCACGAGCACAGCTCCCCCGCC
GTGATCCACCGCGACTTCAAGTGCAGCAACATCCTCCTCGACCACAACTACCGCGCCCGC
GTCTCCGACTTCGGCATGGCCAAGCTCGGCTCCAACAAGGCCAATGGCCAGGTCACCACC
CGCGTCCTCGGCACCACCGGCTACCTCGCCCCAGAGTACGCGTCGACGGGGAAGCTGACG
ACAAAGTCGGACGTGTACAGCTACGGCGTCGTGCTCCTCGAGCTGCTCACTGGGCGGGTG
CCCGTCGACACGAAGCGGCCGCCGGGACAGCACGTACTCGTCTCGTGGGCCCTTCCGCGG
CTGACGAACCGCGAGAAGCTCGTGCAGATGGTGGATCCTGCCCTGATAGGCCAGTTCTCC
CTCAAAGATCTGGTCCAGGTGGCCGCCATCACGGCGATGTGCATACAGACGAAGGCGGAC
TACCGGCCGCTGATGACGGACGTGGTGCAGTCGCTGATCCCCATCGTGAAGAGCCCACTC
ATGTCCTGCACCTCCACGCCGCTGAGGCCCGCGCACGGGCACCACCACGTCGTCTGCATG
AGCCCGAGCAGGGGCTCTTCCAACGGCGGTGCCCTGGAAACGCGATGCGTCATGCACGGC
TTGGATTGATTAGCCATATGCATCTCGATCAGCTGCAGATATATAATGCTAGCTCCTATG
TATTACTACGTCTCGATCGTCGATCGCTTGCTTGGAGTACTTTGAGCCAGGCAGATGGGG
AAGAAGAGATGGATGGTCAGCTTGTCAAGCTGCTCGATCGGAGGGAGATTGCTGGCACTA
CTCCCAGCTGTGTATAGAACGGTACCAGTACCACTTCACCAAGCTCATCACGGCTTGCTT
GCAAGACATCCTTGCAAATGCAATTGCAGATTTGCTGTAGCAGTACATCATCACGTGCGT
ACGATTGTACTATTTATTAGGGACAGTTGTACGACGATTCCTTGTTCTTTTGTACGAAAT
CATATATATTCATATATTCCTGTATAAGATAGTAATTAAGATGGAAAAAATACAATAAAT
GGATC
clustalw multiple alignements is not computed in this case