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Oryza sativa
cluster # 4056 cluster # 4056       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4056#0 length = 1998 sequences # 2  
consensus_4056#1 length = 1295 sequences # 1  

consensusID : consensus_4056#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1998
fasta sequence
                              [CGGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATGCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAGATCATCATCAGAATAAACAAACTAAATCACTAAACACGCCTTCCACCTAAGTATATACGCATCATACCCTATATAATATAATATGCATGTATTAATTAACTGATGATCGACTGTATGCATAATGCATGTACACTACTACTACATATATACAACAGCAACAGTCAGCCAGCCGCCCACAATAAGATCAGCCCAGCTCAATTGCACCTTAATTAGTTAATTAAGAGGCTGATCACAAAATAATTACTCCATATGTGCAACCATTTGTGGCCTCACGCCTTGTTAACTCTCTGTAACAGTATTACTATGCATATATATAATTTGCATAATGGAAGATGTTTCCTCTATAAAGTTGTCCGTATTTAAATTGGTTGGACATCACCCATATCCAATCAACATGAGTCTAAGTTAACTATTATACACCCCCTCTCAGCCTAGCCAACCCAACCCAATTGGCTCACCCCATCACACACACTGTCCCGCGCGCATTTGTATCCATCTGCTTTTTATTCCTTTTCCTTTTTTTCTTTGCTTATTAGTCAACGCTATTTTGATATATAATCAACGTCACTAATTATTAATTTGTAGACCGACACTATCGAGGGAGTAGATCTCGACCATGGTATTTGTAGAGTATGAGAATCGTTGGTGCCAAGGTATACACGAGATTAAGGTAAGAGAGACTGGAGACAAGGACTTTTATATAAGTTCAGTCCCCTTAACTTACAATTAATAGTTCTACTTCTATTGGCTGAAGCTGGTGTTGCCTTCATGTATCAATATCTTACTAATACAATATTT]

[+] EMBL AK069891             [CGGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATGCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAGATCATCATCAGAATAAACAAACTAAATCACTAAACACGCCTTCCACCTAAGTATATACGCATCATACCCTATATAATATAATATGCATGTATTAATTAACTGATGATCGACTGTATGCATAATGCATGTACACTACTACTACATATATACAACAGCAACAGTCAGCCAGCCGCCCACAATAAGATCAGCCCAGCTCAATTGCACCTTAATTAGTTAATTAAGAGGCTGATCACAAAATAATTACTCCATATGTGCAACCATTTGTGGCCTCACGCCTTGTTAACTCTCTGTAACAGTATTACTATGCATATATATAATTTGCATAATGGAAGATGTTTCCTCTATAAAGTTGTCCGTATTTAAATTGGTTGGACATCACCCATATCCAATCAACATGAGTCTAAGTTAACTATTATACACCCCCTCTCAGCCTAGCCAACCCAACCCAATTGGCTCACCCCATCACACACACTGTCCCGCGCGCATTTGTATCCATCTGCTTTTTATTCCTTTTCCTTTTTTTCTTTGCTTATTAGTCAACGCTATTTTGATATATAATCAACGTCACTAATTATTAATTTGTAGACCGACACTATCGAGGGAGTAGATCTCGACCATGGTATTTGTAGAGTATGAGAATCGTTGGTGCCAAGGTATACACGAGATTAAGGTAAGAGAGACTGGAGACAAGGACTTTTATATAAGTTCAGTCCCCTTAACTTACAATTAATAGTTCTACTTCTATTGGCTGAAGCTGGTGTTGCCTTCATGTATCAATATCTTACTAATACAATATTT]
[+] EMBL AK100524             [CGGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATGCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAGGGAGCAC GGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAGATCATCATCAGAATAAACAAACTAAATCACTAAACACGCCTTCCACCTAAGTATATACGCATCATACCCTATATAATATAATATGCATGTATTAATTAACTGATGATCGACTGTATGCATAATGCATGTACACTACTACTACATATATACAACAGCAACAGTCAGCCAGCCGCCCACAATAAGATCAGCCCAGCTCAATTGCACCTTAATTAGTTAATTAAGAGGCTGATCACAAAATAATTACTCCATATGTGCAACCATTTGTGGCCTCACGCCTTGTTAACTCTCTGTAACAGTATTACTATGCATATATATAATTTGCATAATGGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_4056#0 CGGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACAT GCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGTCGATCCC GCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGA GCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGAT CGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCT CACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGA CGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGA GCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAA CATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAA CCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGG GCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGC GAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGG AGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAG GGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGT CTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGAT CTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCT CACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTT CTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGA GACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAA GAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAG ATCATCATCAGAATAAACAAACTAAATCACTAAACACGCCTTCCACCTAAGTATATACGC ATCATACCCTATATAATATAATATGCATGTATTAATTAACTGATGATCGACTGTATGCAT AATGCATGTACACTACTACTACATATATACAACAGCAACAGTCAGCCAGCCGCCCACAAT AAGATCAGCCCAGCTCAATTGCACCTTAATTAGTTAATTAAGAGGCTGATCACAAAATAA TTACTCCATATGTGCAACCATTTGTGGCCTCACGCCTTGTTAACTCTCTGTAACAGTATT ACTATGCATATATATAATTTGCATAATGGAAGATGTTTCCTCTATAAAGTTGTCCGTATT TAAATTGGTTGGACATCACCCATATCCAATCAACATGAGTCTAAGTTAACTATTATACAC CCCCTCTCAGCCTAGCCAACCCAACCCAATTGGCTCACCCCATCACACACACTGTCCCGC GCGCATTTGTATCCATCTGCTTTTTATTCCTTTTCCTTTTTTTCTTTGCTTATTAGTCAA CGCTATTTTGATATATAATCAACGTCACTAATTATTAATTTGTAGACCGACACTATCGAG GGAGTAGATCTCGACCATGGTATTTGTAGAGTATGAGAATCGTTGGTGCCAAGGTATACA CGAGATTAAGGTAAGAGAGACTGGAGACAAGGACTTTTATATAAGTTCAGTCCCCTTAAC TTACAATTAATAGTTCTACTTCTATTGGCTGAAGCTGGTGTTGCCTTCATGTATCAATAT CTTACTAATACAATATTT



consensusID : consensus_4056#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1295
fasta sequence
                              [GGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATGCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGGTAAGCTACTACGCTAGTACGTAATAAGTTTGGTTGAGAAGATACTCCTATATACTGTAAGTTGTGTTGTTGTGTTTTGCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAGATCATCATCAGAAT]

[-] EMBL AK120679             [GGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATGCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGGTAAGCTACTACGCTAGTACGTAATAAGTTTGGTTGAGAAGATACTCCTATATACTGTAAGTTGTGTTGTTGTGTTTTGCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGGCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCATCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGCCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTTCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGGCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGACGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGCGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCCGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGACGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAGGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGCGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCTGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCACCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGTCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTGCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTTCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTGGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGAGCTACACCACCACCACCAAAGATCATCATCAGAAT]


>consensus_4056#1 GGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACATG CTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGGTAAGCTAC TACGCTAGTACGTAATAAGTTTGGTTGAGAAGATACTCCTATATACTGTAAGTTGTGTTG TTGTGTTTTGCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTGG CGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCAT CAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGGC CGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCTT CGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCGG CACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGAC GATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCGC GGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGCC GGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGAC GCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGAG GAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGGC GATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACCT GGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCAC CTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCGT CATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCTG CCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCTT CGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCTG GAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCGA GCTACACCACCACCACCAAAGATCATCATCAGAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4056#0      CGGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACAT 60
consensus_4056#1      -GGCGGCTCCGTCTTCGTCGCCGGCTCCGTCTTCGGCGGCGCCGCTGTCAACATCTACAT 59
                       ***********************************************************

consensus_4056#0      GCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAG-------- 112
consensus_4056#1      GCTCATCCTCAACAGGGTCCTGCTCGGCATTGGACTCGGCTTCACCAACCAGGTAAGCTA 119
                      ****************************************************        

consensus_4056#0      ------------------------------------------------------------
consensus_4056#1      CTACGCTAGTACGTAATAAGTTTGGTTGAGAAGATACTCCTATATACTGTAAGTTGTGTT 179
                                                                                  

consensus_4056#0      --------------TCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTG 158
consensus_4056#1      GTTGTGTTTTGCAGTCGATCCCGCTGTATCTGTCGGAGATGGCGCCTCCGCAGCACCGTG 239
                                    **********************************************

consensus_4056#0      GCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCA 218
consensus_4056#1      GCGCCATCAACAACGGGTTCGAGCTGTGCATCAGCATCGGCATCCTCATCGCTAACCTCA 299
                      ************************************************************

consensus_4056#0      TCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGG 278
consensus_4056#1      TCAACTACGGCGTGGACAAGATCGAGGGCGGGTGGGGGTGGAGGATCTCCCTGTCCATGG 359
                      ************************************************************

consensus_4056#0      CCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCT 338
consensus_4056#1      CCGCCGTCCCCGCGGCGTTCCTCACCGTGGGCGCGCTGTTCCTGCCGGAGACGCCCAGCT 419
                      ************************************************************

consensus_4056#0      TCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCG 398
consensus_4056#1      TCGTGATCCAGCGCAGCGGCGACGTGGACTCGGCTCGGGCGTTGCTGCAGCGGCTGCGCG 479
                      ************************************************************

consensus_4056#0      GCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGA 458
consensus_4056#1      GCACGGCGGCGGTGCACAAGGAGCTGGAGGACCTGGTGATGGCGAGCGAGGTGTCCAAGA 539
                      ************************************************************

consensus_4056#0      CGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCG 518
consensus_4056#1      CGATCAGGCACCCGCTGCGGAACATGCTCCGGCGTCGGTACAGGCCGCAGCTGGTGATCG 599
                      ************************************************************

consensus_4056#0      CGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGC 578
consensus_4056#1      CGGTGCTGGTGCCCCTGTTCAACCAGGTGACCGGGATCAACGTGATAAACTTCTACGCGC 659
                      ************************************************************

consensus_4056#0      CGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGA 638
consensus_4056#1      CGGTGATGTTCCGGACGATCGGGCTGCGGGAGAGCGCGTCGCTGATGTCGGCGGTGGTGA 719
                      ************************************************************

consensus_4056#0      CGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGA 698
consensus_4056#1      CGCGGGTGTGCGCGACGGCGGCGAACGTGGTGGCGATGGCGGTGGTGGACAGGCTGGGGA 779
                      ************************************************************

consensus_4056#0      GGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGG 758
consensus_4056#1      GGAGGAGGCTGCTGCTGGTGGGAGGGGTGCAGATGCTGGTGTCGCAGGTGATGGTGGGGG 839
                      ************************************************************

consensus_4056#0      CGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACC 818
consensus_4056#1      CGATCCTGGCGGGCAAGTTCAGGGAGCACGGGGAGGAGATGGAGAAGGAGTACGCGTACC 899
                      ************************************************************

consensus_4056#0      TGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCA 878
consensus_4056#1      TGGTGCTGAGCGTCATGTGCGTCTTCGTCGCGGGCTTCGCCTGGTCGTGGGGGCCCCTCA 959
                      ************************************************************

consensus_4056#0      CCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCG 938
consensus_4056#1      CCTACCTGGTCCCCGCCGAGATCTGCCCTCTGGAGGTGCGGTCGGCGGGGCAGAGCATCG 1019
                      ************************************************************

consensus_4056#0      TCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCT 998
consensus_4056#1      TCATCGCCGTCATCTTCCTCCTCACCTTCCTCATCGGCCAGACCTTCCTCGCCATGCTCT 1079
                      ************************************************************

consensus_4056#0      GCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCT 1058
consensus_4056#1      GCCACCTCAAGTTCGCCACCTTCTTCCTCTTCGCCGCCTGCCTCTGCGTCATGACGCTCT 1139
                      ************************************************************

consensus_4056#0      TCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCT 1118
consensus_4056#1      TCGTCTTCTTCTTCCTCCCTGAGACCAAGCAGCTGCCCATGGAGCAGATGGATCAGCTCT 1199
                      ************************************************************

consensus_4056#0      GGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCG 1178
consensus_4056#1      GGAGGACGCATTGGTTCTGGAAGAGGATCGTCGGCGACTCCCCCCAACAACAAGTAGTCG 1259
                      ************************************************************

consensus_4056#0      AGCTACACCACCACCACCAAAGATCATCATCAGAATAAACAAACTAAATCACTAAACACG 1238
consensus_4056#1      AGCTACACCACCACCACCAAAGATCATCATCAGAAT------------------------ 1295
                      ************************************                        

consensus_4056#0      CCTTCCACCTAAGTATATACGCATCATACCCTATATAATATAATATGCATGTATTAATTA 1298
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      ACTGATGATCGACTGTATGCATAATGCATGTACACTACTACTACATATATACAACAGCAA 1358
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      CAGTCAGCCAGCCGCCCACAATAAGATCAGCCCAGCTCAATTGCACCTTAATTAGTTAAT 1418
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      TAAGAGGCTGATCACAAAATAATTACTCCATATGTGCAACCATTTGTGGCCTCACGCCTT 1478
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      GTTAACTCTCTGTAACAGTATTACTATGCATATATATAATTTGCATAATGGAAGATGTTT 1538
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      CCTCTATAAAGTTGTCCGTATTTAAATTGGTTGGACATCACCCATATCCAATCAACATGA 1598
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      GTCTAAGTTAACTATTATACACCCCCTCTCAGCCTAGCCAACCCAACCCAATTGGCTCAC 1658
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      CCCATCACACACACTGTCCCGCGCGCATTTGTATCCATCTGCTTTTTATTCCTTTTCCTT 1718
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      TTTTTCTTTGCTTATTAGTCAACGCTATTTTGATATATAATCAACGTCACTAATTATTAA 1778
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      TTTGTAGACCGACACTATCGAGGGAGTAGATCTCGACCATGGTATTTGTAGAGTATGAGA 1838
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      ATCGTTGGTGCCAAGGTATACACGAGATTAAGGTAAGAGAGACTGGAGACAAGGACTTTT 1898
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      ATATAAGTTCAGTCCCCTTAACTTACAATTAATAGTTCTACTTCTATTGGCTGAAGCTGG 1958
consensus_4056#1      ------------------------------------------------------------
                                                                                  

consensus_4056#0      TGTTGCCTTCATGTATCAATATCTTACTAATACAATATTT 1998
consensus_4056#1      ----------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)