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Oryza sativa
cluster # 4057 cluster # 4057       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4057#0 length = 1568 sequences # 3  

consensusID : consensus_4057#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1568
fasta sequence
                              [GTCGATACCCAGCCATGCTCCCGCTGCGGCGCTTTGCGGGGGCCTGCCGCCGGCGAGGCCTCGCCGGGATCGCCCCCGGAGCACCCCGGGAGGCGGCGGACGCGGTGGTGGTGGGCGCCGGCGTGGTCGGGCTCGCGGTGGCGCGCGCGCTGGCCATGGCCGGCCGCGAGGTGGTGGTGGTCGAGGCCGCCCCCAGCTTCGGCACCGGCACCAGCTCCCGCAACAGCGAGGTCATCCACGCCGGCATCTACTACCCTCCCGGCAGCCTAAAGGCTAGTCTTTGTGTAAGAGGAAGGGAAATGCTCTACAAGTACTGTGCAGAACGAGAAATTCCCCATAAACAGCTCGGTAAACTCATCGTTGCTACTGGTGTTGCAGAGACGGCAAAATTGGACATGCTTCTCAAGAATGCTAAAGAAAATGGGGTGGATGATCTTCAGATGATGGAGGGTTCTGAAGCTATGGAGATGGAACCTGAACTTCGCTGTCTTAAGGCTTTACTGTCACCTCGTACTGGGATTGTTGACTCTCATTCATTCATGCTCTCCCTTTTGGCTGATGCTGAGAATTTAGGAACAGCCATATCTTACAACACAACGGTTACAAATGGATATATTGGAGATGAAGGCCTCGAGCTTCATATTTCTGAAAGCAAAGCACTGGAGAATCATTCTGTGGGCTCTCCTGTGTCCCCACAACTCATTTTGTTTCCAAAACTTCTGATAAATTCAGCAGGTTTGAGTGCGGCTCCACTTGCTAAAAGATTCCATGGCCTTAACCAAGTATTTGTGCCCCCTGCTTATTATGCGCGTGGATGTTACTTCACCCTTTCTCAAACCAAGAGCCCTTTCAGCCACTTGATCTACCCTCTACCAGAGGATGGTGGCATAGGGGTACATGTCACGCTAGATTTGAATGGTGTTGTTAGATTTGGCCCAGATGTTGAGTGGATAGATGGTGGTAAGGATGTCAC-GTCATGCTTCCTGAGTAGGTTCGATTACTCAGTCAATCCTACCAGATGTTCTAAATTTTATCCTGTAATAAGGAAGTATTTTCCTAACCTCAAGGATGATTCTTTGGAACCCGGTTATTCTGGGATACGACCAAAGCTTTCTGGCCCGGGGCAGCCTCCTTCAGATTTTGTTATTCAGGGGGAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTTTGGAATAGAATCCCCTGGTCTGACGTCAAGTTTGGCAATTGCTGAATACATTGTTTCAAGGTATTTGAGATGAGAGCCCCTCGAGTCAACACTTCATACTTTGTTTCAAGGTATTCTCGCCTTCATGCGGCGCGGAAGCCGGCAGGGTCATGTGAATCACATTACTTGTGTATTTATGATTGTGATCTTTGTTTGCCCTTTGCATCAACAAAACACCTTTCGGCAACTTGATAGGCTTGCAAGGCAATTCTTGTATTCCTTGTTTTCTTTTCTTTCTTTTGAGGATTTTGCAAGCTGTGTTGCAAGTGTTATATTTTGGCAGTTTGGCTGAGATCCGAACTTAGCTATTGCAATAATGTATAGAGAAGCACGAAAA]

[+] EMBL AK120681             [GTCGATACCCAGCCATGCTCCCGCTGCGGCGCTTTGCGGGGGCCTGCCGCCGGCGAGGCCTCGCCGGGATCGCCCCCGGAGCACCCCGGGAGGCGGCGGACGCGGTGGTGGTGGGCGCCGGCGTGGTCGGGCTCGCGGTGGCGCGCGCGCTGGCCATGGCCGGCCGCGAGGTGGTGGTGGTCGAGGCCGCCCCCAGCTTCGGCACCGGCACCAGCTCCCGCAACAGCGAGGTCATCCACGCCGGCATCTACTACCCTCCCGGCAGCCTAAAGGCTAGTCTTTGTGTAAGAGGAAGGGAAATGCTCTACAAGTACTGTGCAGAACGAGAAATTCCCCATAAACAGCTCGGTAAACTCATCGTTGCTACTGGTGTTGCAGAGACGGCAAAATTGGACATGCTTCTCAAGAATGCTAAAGAAAATGGGGTGGATGATCTTCAGATGATGGAGGGTTCTGAAGCTATGGAGATGGAACCTGAACTTCGCTGTCTTAAGGCTTTACTGTCACCTCGTACTGGGATTGTTGACTCTCATTCATTCATGCTCTCCCTTTTGGCTGATGCTGAGAATTTAGGAACAGCCATATCTTACAACACAACGGTTACAAATGGATATATTGGAGATGAAGGCCTCGAGCTTCATATTTCTGAAAGCAAAGCACTGGAGAATCATTCTGTGGGCTCTCCTGTGTCCCCACAACTCATTTTGTTTCCAAAACTTCTGATAAATTCAGCAGGTTTGAGTGCGGCTCCACTTGCTAAAAGATTCCATGGCCTTAACCAAGTATTTGTGCCCCCTGCTTATTATGCGCGTGGATGTTACTTCACCCTTTCTCAAACCAAGAGCCCTTTCAGCCACTTGATCTACCCTCTACCAGAGGATGGTGGCATAGGGGTACATGTCACGCTAGATTTGAATGGTGTTGTTAGATTTGGCCCAGATGTTGAGTGGATAGATGGTGGTAAGGATGTCAC GTCATGCTTCCTGAGTAGGTTCGATTACTCAGTCAATCCTACCAGATGTTCTAAATTTTATCCTGTAATAAGGAAGTATTTTCCTAACCTCAAGGATGATTCTTTGGAACCCAGTTATTCTGGGATACGACCAAAGCTTTCTGGCCCGGGGCAGCCTCCTTCAGATTTTGTTATTCAGGGGGAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTTTGGAATAGAATCCCCTGGTCTGACGTCAAGTTTGGCTATTGCTGAATACATTGTTTCAAGGTATTTGAGATGAGAGCCCCTCGAGTCAACACTTCATACTTTGTTTCAAGGTATTCTCGCCTTCATGCGGCGCGGAAGCCGGCAGGGTCATGTGAATCACATTACTTGTGTATTTATGATTGTGATCTTTGTTTGCCCTTTGCATCAACAAAACACCTTTCGGCAACTTGATAGGCTTGCAAGGCAATTCTTGTATTCCTTGTTTTCTTTTCTTTCTTTTGAGGATTTTGCAAGCTGTGTTGCAAGTGTTATATTTTGGCAGTTTGGCTGAGATCCGAACTTAGCTATTGCAATAATGTATAGAGAAGCACGAAA ]
[-] EMBL CB965806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aTTTGATTTGCCCCAAATGTTGAGTGGATAAATGGTGTTAAGGATGTCACGGTCATGCTTCCTGAGTAGGTTCGATTACTCAGTCAATCCTACCAGATGTTCTAAATTTTATCCTGTAATAAGGAAGTATTTTCCTAACCTCAAGGATGATTCTTTGGAACCCGGTTATTCTGGGATACGACCTAAGCTTTCTGGCCCGGGTCAGCCTCCTTCAGATTTTGTTATTCAGGGGGAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTTTGGAATAGAATCCACTGGTCTGACGTCAAGTTTGGCAATTGCTGAATACATTGTTTCAAGGTATTTGAGATGAGAGCCCCTCGAGTCAACACTTCATACTTTGTTTCAAGGTATTCTCGCCTTCATGCGGCGCGGAAGCCGGCAGGGTCATGTGAATCACATTACTTGTGTATTTATGATTGTGATCTTTGTTTGCCCTTTGCATCAACAAAACACCTTTCGGCAACTTGATAGGCTTGCAAGGCAATTCTTGTATTCCTTGTTTTCTTTTCTTTCTTTTGAGGATTTTGCAAGCTGTGTTGCAAGTGTTATATTTTGGCAGTTTGGCTGAGATCCGAACTTAGCTATTGCAATAATGTATAGAGAAGCACGAAAA]
[-] EMBL BI305405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGATTACTCAGTCAATCCTACCAGATGTTCTAAATTTTATCCTGTAATAAGGAAGTATTTTCCTACCCTCAAGGATGATTCTTTGGAACCCGGTTATTTTGGGATACGACCAAAGCTTTTTGGCCCGGGGCAGCCTCCTTCAGATTTTGTTATTCAGGGGGAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTTTGGAATAGAATCCCCTGGTCTGACGTCAAGTTTGGCAATTGCTGAATACATTGTTTCAAGGTATTTGAGATGAGAGCCCCTCGAGTCAACACTTCATACTTTGTTTCAAGGTATTTTCGCCTTCATGCGGCGCGGAAGCCGGCAGGGTCATGTGAATCCCATTACTTGGGGATTTATGATTGTGATCTTTGTTTGCCCTTTGCATCAACAAAACCCCTTTCGGCAACTTGATAGGCTTGCAAGGCAATTCTTGTATTCCTTGTTTTCTTTTCTTTCTTTTGAGGATTTTGCAAGCTGTGTTGCAAGTGTTATATTTTGGCAGTTTGGCTGAGATCCGAACTTAGCTATTGCAATAATGTATAGAGAAGCCCGAAAA]


>consensus_4057#0 GTCGATACCCAGCCATGCTCCCGCTGCGGCGCTTTGCGGGGGCCTGCCGCCGGCGAGGCC TCGCCGGGATCGCCCCCGGAGCACCCCGGGAGGCGGCGGACGCGGTGGTGGTGGGCGCCG GCGTGGTCGGGCTCGCGGTGGCGCGCGCGCTGGCCATGGCCGGCCGCGAGGTGGTGGTGG TCGAGGCCGCCCCCAGCTTCGGCACCGGCACCAGCTCCCGCAACAGCGAGGTCATCCACG CCGGCATCTACTACCCTCCCGGCAGCCTAAAGGCTAGTCTTTGTGTAAGAGGAAGGGAAA TGCTCTACAAGTACTGTGCAGAACGAGAAATTCCCCATAAACAGCTCGGTAAACTCATCG TTGCTACTGGTGTTGCAGAGACGGCAAAATTGGACATGCTTCTCAAGAATGCTAAAGAAA ATGGGGTGGATGATCTTCAGATGATGGAGGGTTCTGAAGCTATGGAGATGGAACCTGAAC TTCGCTGTCTTAAGGCTTTACTGTCACCTCGTACTGGGATTGTTGACTCTCATTCATTCA TGCTCTCCCTTTTGGCTGATGCTGAGAATTTAGGAACAGCCATATCTTACAACACAACGG TTACAAATGGATATATTGGAGATGAAGGCCTCGAGCTTCATATTTCTGAAAGCAAAGCAC TGGAGAATCATTCTGTGGGCTCTCCTGTGTCCCCACAACTCATTTTGTTTCCAAAACTTC TGATAAATTCAGCAGGTTTGAGTGCGGCTCCACTTGCTAAAAGATTCCATGGCCTTAACC AAGTATTTGTGCCCCCTGCTTATTATGCGCGTGGATGTTACTTCACCCTTTCTCAAACCA AGAGCCCTTTCAGCCACTTGATCTACCCTCTACCAGAGGATGGTGGCATAGGGGTACATG TCACGCTAGATTTGAATGGTGTTGTTAGATTTGGCCCAGATGTTGAGTGGATAGATGGTG GTAAGGATGTCACGTCATGCTTCCTGAGTAGGTTCGATTACTCAGTCAATCCTACCAGAT GTTCTAAATTTTATCCTGTAATAAGGAAGTATTTTCCTAACCTCAAGGATGATTCTTTGG AACCCGGTTATTCTGGGATACGACCAAAGCTTTCTGGCCCGGGGCAGCCTCCTTCAGATT TTGTTATTCAGGGGGAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTTTGGAATAG AATCCCCTGGTCTGACGTCAAGTTTGGCAATTGCTGAATACATTGTTTCAAGGTATTTGA GATGAGAGCCCCTCGAGTCAACACTTCATACTTTGTTTCAAGGTATTCTCGCCTTCATGC GGCGCGGAAGCCGGCAGGGTCATGTGAATCACATTACTTGTGTATTTATGATTGTGATCT TTGTTTGCCCTTTGCATCAACAAAACACCTTTCGGCAACTTGATAGGCTTGCAAGGCAAT TCTTGTATTCCTTGTTTTCTTTTCTTTCTTTTGAGGATTTTGCAAGCTGTGTTGCAAGTG TTATATTTTGGCAGTTTGGCTGAGATCCGAACTTAGCTATTGCAATAATGTATAGAGAAG CACGAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)