These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4073#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1714 fasta sequence [GAAGACGACGCCAAGATCGAATAATATGACGGAGCCGAGATCGAATACGGCAAAGACGATGACCATTATGCAGCGCCGCGACCGGCTGAGCGATCTCCCGGATGCGACGCTGGCGCGGGTACTCTACCACCTCGGCTCCGTCAACGCGACCGTCACGTCCGCGCTGTCCCGGCGGTGGCGCAACGTCCACGCCGCCGTCCCCGTCGTCGACCTCGTCGACCCCAAGAAGGGCGAACGGTGGGGAAACGTCTCGGGACAGAAGACCTGCTTCGATCATCAGGTTACCGCCGCCATCCTCGGCAAGGAC-TTGCCGACCCGCAAGTTCCGGCTCGACGCGTTCTACCCGCCTTACGACCTGCGCGACCAGTGGTTCGCCATCGTCTCCGTCTCCGGCCTCGAGGAGTTCGACGTCAAGCTCCGGTACTGGGACCACTCCAGGCGCAACCTCTGTCCGTTTGGCACCCACCCCAAGGCCTCCGCCGACTTCGACGAGGAGATGCGCCACTCGTTCACCGCAACGCCGCCGCACATCTTCCGGTGCGACACGCTGCGCCGTCTGCTGCTCACCAACTGGACGCTCGACGTGCCGGCGGGCGGCGTCTCCATGCCGTCGCTGGAGACCCTATTCCTCAAGAGGATCATGGCGGAGGACGGGGCGGTGCAGCGTCTCATCTCTGGCTGCCCGAACATCGCCGACCTGACGCTGGAGCAGTGCCCCAGCGTGAAGAGGCTCGTCGTCGCCAGCCCGCGCCTCGACAGCTTCGCCATGATCTGCTGCCACCACGCCAGCCACGTCGTGCTCCAAGCCGAGCGCCTCCGGACGCTGCGCTACAAGGGCGGCCTCCCCGGTGAGAACTTCTTCTCCATCGCCAACTGCGGTGACGTACTGGCCATGACCATCGACATCTGCGAAAGCCTCCTCGGGAAATCGGCATCGGCTGTCGTCCCCATCACAAAGGTCATCACCCGGTGCACCAACGTCACCTTCCTCCACCTCCACCTTCGCCCGACAATGGCGTTCCACAGCGGGACTTTCACACGCGCCCTCCGCCATCTTCCCCACCTCCGGC-AGCTCGCTCTCAAGGGCCTCCTCGACAATGACGAAACCGCCTTATCAGTCT-CCACGTTGCTTCGCAACACGCCGAACCTCGACGTGCTCTCGCTGATCCCTCTCCGTCCTCGCCCCCCAAAGCCTGACTATCTTTACATGTTCGACGGCTCCGACGATGACTCCTCGCAGAACGGCTAAGAGGAAAACAAGAAGGACAAGAGCGCCTTGGACGGTGAAGACACCTATGTTCATGTGCCGAAGATCTTGTGGGAGACTCGAGTAGAGTGCTTGCACAGGCTGAGGAAGATCAAGCTGCTCAACTACAAAGGGACGCCCAACGAGAGGATGCTTGCAAAGTATCTCCTCTCCAAGGCATCAGCTTTGGAGCAATGCTCCATTACCCTGCCAGCTAATAAAACATCAACAGAAGATCGTCGATGGAAGTTGACGAAGGAGCTGTCATACTGGCGAGCGAACAAGCGGACAAGAATCTCTTATAAGAGTCACGTCTAGATTATGAAATCTTTGCTTCAATTCTTTGGGTAAAAATCTGTATATTGGTTGAGTCACTATTGGATGACGAAAGTTTAATTGCTTCGAGCATATCGATTCAAAGGTTATGTTGTCGAAATAAAGAGAGACAAAATTTCGAAAAAAAAAAAA] [+] EMBL AK071614 [GAAGACGACGCCAAGATCGAATAATATGACGGAGCCGAGATCGAATACGGCAAAGACGATGACCATTATGCAGCGCCGCGACCGGCTGAGCGATCTCCCGGATGCGACGCTGGCGCGGGTACTCTACCACCTCGGCTCCGTCAACGCGACCGTCACGTCCGCGCTGTCCCGGCGGTGGCGCAACGTCCACGCCGCCGTCCCCGTCGTCGACCTCGTCGACCCCAAGAAGGGCGAACGGTGGGGAAACGTCTCGGGACAGAAGACCTGCTTCGATCATCAGGTTACCGCCGCCATCCTCGGCAAGGAC TTGCCGACCCGCAAGTTCCGGCTCGACGCGTTCTACCCGCCTTACGACCTGCGCGACCAGTGGTTCGCCATCGTCTCCGTCTCCGGCCTCGAGGAGTTCGACGTCAAGCTCCGGTACTGGGACCACTCCAGGCGCAACCTCTGTCCGTTTGGCACCCACCCCAAGGCCTCCGCCGACTTCGACGAGGAGATGCGCCACTCGTTCACCGCAACGCCGCCGCACATCTTCCGGTGCGACACGCTGCGCCGTCTGCTGCTCACCAACTGGACGCTCGACGTGCCGGCGGGCGGCGTCTCCATGCCGTCGCTGGAGACCCTATTCCTCAAGAGGATCATGGCGGAGGACGGGGCGGTGCAGCGTCTCATCTCTGGCTGCCCGAACATCGCCGACCTGACGCTGGAGCAGTGCCCCAGCGTGAAGAGGCTCGTCGTCGCCAGCCCGCGCCTCGACAGCTTCGCCATGATCTGCTGCCACCACGCCAGCCACGTCGTGCTCCAAGCCGAGCGCCTCCGGACGCTGCGCTACAAGGGCGGCCTCCCCGGTGAGAACTTCTTCTCCATCGCCAACTGCGGTGACGTACTGGCCATGACCATCGACATCTGCGAAAGCCTCCTCGGGAAATCGGCATCGGCTGTCGTCCCCATCACAAAGGTCATCACCCGGTGCACCAACGTCACCTTCCTCCACCTCCACCTTCGCCCGACAATGGCGTTCCACAGCGGGACTTTCACACGCGCCCTCCGCCATCTTCCCCACCTCCGGC AGCTCGCTCTCAAGGGCCTCCTCGACAATGACGAAACCGCCTTATCAGTCT CCACGTTGCTTCGCAACACGCCGAACCTCGACGTGCTCTCGCTGATCCCTCTCCGTCCTCGCCCCCCAAAGCCTGACTATCTTTACATGTTCGACGGCTCCGACGATGACTCCTCGCAGAACGGCTAAGAGGAAAACAAGAAGGACAAGAGCGCCTTGGACGGTGAAGACACCTATGTTCATGTGCCGAAGATCTTGTGGGAGACTCGAGTAGAGTGCTTGCACAGGCTGAGGAAGATCAAGCTGCTCAACTACAAAGGGACGCCCAACGAGAGGATGCTTGCAAAGTATCTCCTCTCCAAGGCATCAGCTTTGGAGCAATGCTCCATTACCCTGCCAGCTAATAAAACATCAACAGAAGATCGTCGATGGAAGTTGACGAAGGAGCTGTCATACTGGCGAGCGAACAAGCGGACAAGAATCTCTTATAAGAGTCACGTCTAGATTATGAAATCTTTGCTTCAATTCTTTGGGTAAAAATCTGTATATTGGTTGAGTCACTATTGGATGACGAAAGTTTAATTGCTTCGAGC ] [+] EMBL C72216 [ GACGGAGCCGAGATCGAATACGGCAAAGACGATGACCATTATGCAGCGCCGCGACCGGCTGAGCGATCTCCCGGATGCGACGCTGGCGCGGGTGCTCTACCACCTCGGCTCCGTCAACGCGACCGTCACGTCCGCGCTGTCCCGGCGGTGGCGCAACGTCCACGCCGCCGTCCCCGTCGTCGACCTCGTCGACCCCAAGAAGGGCGAACGGTGGGGAAACGTCTCGGGACAGAAGACCTGCTTCGATCATCAGGTTACCGCCG CATCCTCGG AAGGACTTTGCCGACCCG AAGTTCCGGTTCGACGNGTTCTACCCG CTTACGACCTTCGCGACCAGTGGTTCGCAATCGTTTCCG ] [+] EMBL AU101130 [ aATNTTCCCCA CTCCGGCAAGTTCGCTCTCAAGGNCCTCCTCGACATTGACGAAACCGCCTTATCAGTCTCCCANCTTG TTCGCAACACGCCGAACCTCGACGTGCTCTCGCTGATCCCTCTCCGTCCTCGCCCCCCAAAGCCTGACTATCTTTACATGTTCGACGGCTCCGACGATGACTCCTCGCAGAACGGCTAAGAGGAAAACAAGAAGGACAAGAGCGCCTTGGACGGTGAAGACACCTATGTTCATGTGCCGAAGATCTTGTGGGAGACTCGAGTAGAGTGCTTGCACAGGCTGAGGAAGATCAAGCTGCTCAACTACAAAGGGACGCCCAACGAGAGGATGCTTGCAAAGTATCTCCTCTCCAAGGCATCAGCTTTGGAGCAATGCTCCATTACCCTGCCAGCTAATAAAACATCAACAGAAGATCGTCGATGGAAGTTGACGAAGGAGCTGTCATACTGGCGAGCGAACAAGCGGACAAGAATCTCTTATAAGAGTCACGTCTAGATTATGAAATCTTTGCTTCAATTCTTTGGGTAAAAATCTGTATATTGGTTGAGTCACTATTGGATGACGAAAGTTTAATTGCTTCGAGCATATCGATTCAAAGGTTATGTTGTCGAAATAAAGAGAGACAAAATTTCGAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||