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Oryza sativa
cluster # 4083 cluster # 4083       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4083#0 length = 2801 sequences # 2  
consensus_4083#1 length = 605 sequences # 1  

consensusID : consensus_4083#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2801
fasta sequence
                              [GGACCATCCATGGCGGTTCCCCGCCGGCGACGAGCTCTGCCCGGTCTGCGCCGCGCCGCACTTCCCCTTCTGCCCGCCTCCGCCCCACCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCCGCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCACCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTACGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCAGCCGGGGATGGTTCCCGTGGAGGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGNCGCCCTCCGTTTCCGCCGCCGCCTGGGATGTTGCACGGCGAACCGTACCACCTCCTGATCGGTTCGGTTAGGGAGGAGGGAGAGGTTATCCTCCTCCTCAAAATAATGAAAATCCCTATGGGAATGAGGGCAGTTTTCCCGGATTAAGAAGCCGGCGGGGAGGTTCCAACCGGGGCTTGAAAGGTTGGCGGCCTAAGGTTAAATTTTGGGGCCGGGAGGACCTAAGGGGGGTTTTTCAAACAAGGATCACGGTTACAATGGTTTCAAAGGCTGGAAATGGCTGGTGGGGCGGCGGCCCCTTCAACGGGCTTGATACCTGGAGGGGAAAACCGGTAATGATTCCAAGGGTGGGATTCCGGAGGGGGATGTCCACCACACAACAACACGGAAGCTCCGGTACGTTTCCTAAATTACAAGCAAACCACTTTGAGGCGGAAATATTTGTTCTATTATCGGTTCTCAGCGCACTGGGGCCCACTAGTCTATATTTGATCAGCTCACCTGATGCCTAATGCAAATCGTTACAATGGACCTATCCACAATGAGGTACCAGGTTTGGCATATCAACCACACTTAGAGCAACATTTAGGAGGTGGAAGGCAAACCCAAGCTCAGCATTCCATCAACAATGCTAAAATCAGTGTAATTAGTGCCTGTGACTTGTTCAAGCAGCCACTTCGTGGGTCACGGCCTGATCATATTGTTATCATCCTCCGGGGGCTGCCAGGTAGTGGAAAGAGCTATCTTGCAAAGGGATTGCGTGACCTTGAAGTTGAGAATGGTGGAAATGCACCTAGAATTCATTCGATGGATGACTATTTCATGATTGAGGTTGAGAAGAAAGTTGAAGACAATGAAGGGTCAAAATCTTCTAGTACATCCAAAGGAAGAAAGCAGCTGACCAAGAAAGTGATCGAGTACTGTTATGAGCCTGAGATGGAGGAGACGTACAGATCAAGCATGTTGAACGCATTTAAGAAGACCCTTGATGAAGGGAATTTTACATTTGTGATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTGGCTCAATTTGGGGCAAGTGCGAAGAAATCAGGCTATGAAGTGTACCTGCTGGAGGCACCATACAAGGATCCAACAGGCTGTGCTGCTAGGAATGTGCATGGGTTTACAGTAGATGATGTGAACAAGATGGCAGCAGACTGGGAAGAGGCTCCACCACTATATCTTCGACTAGACATCCATTCATTATTCAACGATGACCATCTACGCGAGCATTCCATTCAAGAGGTGGATATGGAGACAGAAGACACTGATGGGGCCCCTAACACAGCAACTAGTACTGAAGCTGAAAACACACAGAAGGCTGTGTCTGAATCACTAGATAATGGACATGATCAAGGAGCAGGGAAGAAGTGGGACTCGTCAGAAGAAGACGACCTGGATGGCTACAAAGAGCTAGGACAGAGTAAATGGTCAAAAGATTTTGATGAGGATACCGAGAAGTCTGACCATGCAGAAGGAAGTACGCATGCTCTTTCTGGATTGGCTCAAACCTACAGCACGCATCGAAAAACAGTTACCTGGGGAGATTGGGCTAAAAAAGGGTGGTTTTTTTATTGGTGCAGCTAAAAGAAGACTCACTTCTTCATTAATCATAGGAGCCGGATCAGGGTAAAATTTGGTTTCCAACCCCCTTGGGCTGGAAAATAATTTCCAAGCAGGGCAAAGGGGGGTAATCAACACCGATACAAAAGAAAGGATTCAGCGAACAACTTCGTGACGAAGGTGAATCCTTCAGGGGCAGTTTTTCGATAAGAGGAGGCAGGGCGTCGGAGTTTTTGGCAACGGAGATGGCGAGTGATCCTCGACAAGAAGCCTCCAATGGCCTCTCTCGATGGTCAGGATACTCTAGGCATGGTTTGGCCATCAGTTTTGCTTCGGAATCAGTTTTGCTTCGTTGCAATTCTGCGGCTCGGAATGTACTGCTGCTGCCTGGCTCCTTTTTCCCAATTTCCCCATTCACACAGTTCACGGAGAGCCCTTGTTCCGGCCTTGTGCCTTGTCCATGTGTACCCCTTTGGTCACAAACAGAAGGTAACGGGGAATGCAGATTTGTGGCACTGTTGTATCTGTAAGCTGTCCCAATACCCAGAGGCTGCTAGTTAAAAAGCGCCCCCATAGAATGTAGCACTATCAGAAATGCTCAATTCTTGTTATTTAATATAGAGGTTTTCCAGAGTAGTACTATATTTGTAGTAGTGTTCTTATCATGTAGTCTTTACTTATTATGACTGCAGCCTGATGTCTATAAATACAAGGCACATGGTAGGAAGAGCCATATATACCTGTCTGAAATTTCAGTACTGTTGATTTTCAGTTTGAGTATAAAGTGTACCATTCAATACTCTATATATGTGTGTCTAAACATTTGATGTGATGGGTGAAAAGTTATTGTTTTGGGAACTAAACAGGGGCGGGT]

[+] EMBL AK072483             [GGACCATCCATGGCGGTTCCCCGCCGGCGACGAGCTCTGCCCGGTCTGCGCCGCGCCGCACTTCCCCTTCTGCCCGCCTCCGCCCCACCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCCGCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCACCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTACGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCAGCCGGGGATGGTTCCCGTGGAGGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGNCGCCCTCCGTTTCCGCCGCCGCCTGGGATGTTGCACGGCGAACCGTACCACCTCCTGATCGGTTCGGTTAGGGAGGAGGGAGAGGTTATCCTCCTCCTCAAAATAATGAAAATCCCTATGGGAATGAGGGCAGTTTTCCCGGATTAAGAAGCCGGCGGGGAGGTTCCAACCGGGGCTTGAAAGGTTGGCGGCCTAAGGTTAAATTTTGGGGCCGGGAGGACCTAAGGGGGGTTTTTCAAACAAGGATCACGGTTACAATGGTTTCAAAGGCTGGAAATGGCTGGTGGGGCGGCGGCCCCTTCAACGGGCTTGATACCTGGAGGGGAAAACCGGTAATGATTCCAAGGGTGGGATTCCGGAGGGGGATGTCCACCACACAACAACACGGAAGCTCCGGTACGTTTCCTAAATTACAAGCAAACCACTTTGAGGCGGAAATATTTGTTCTATTATCGGTTCTCAGCGCACTGGGGCCCACTAGTCTATATTTGATCAGCTCACCTGATGCCTAATGCAAATCGTTACAATGGACCTATCCACAATGAGGTACCAGGTTTGGCATATCAACCACACTTAGAGCAACATTTAGGAGGTGGAAGGCAAACCCAAGCTCAGCATTCCATCAACAATGCTAAAATCAGTGTAATTAGTGCCTGTGACTTGTTCAAGCAGCCACTTCGTGGGTCACGGCCTGATCATATTGTTATCATCCTCCGGGGGCTGCCAGGTAGTGGAAAGAGCTATCTTGCAAAGGGATTGCGTGACCTTGAAGTTGAGAATGGTGGAAATGCACCTAGAATTCATTCGATGGATGACTATTTCATGATTGAGGTTGAGAAGAAAGTTGAAGACAATGAAGGGTCAAAATCTTCTAGTACATCCAAAGGAAGAAAGCAGCTGACCAAGAAAGTGATCGAGTACTGTTATGAGCCTGAGATGGAGGAGACGTACAGATCAAGCATGTTGAACGCATTTAAGAAGACCCTTGATGAAGGGAATTTTACATTTGTGATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTGGCTCAATTTGGGGCAAGTGCGAAGAAATCAGGCTATGAAGTGTACCTGCTGGAGGCACCATACAAGGATCCAACAGGCTGTGCTGCTAGGAATGTGCATGGGTTTACAGTAGATGATGTGAACAAGATGGCAGCAGACTGGGAAGAGGCTCCACCACTATATCTTCGACTAGACATCCATTCATTATTCAACGATGACCATCTACGCGAGCATTCCATTCAAGAGGTGGATATGGAGACAGAAGACACTGATGGGGCCCCTAACACAGCAACTAGTACTGAAGCTGAAAACACACAGAAGGCTGTGTCTGAATCACTAGATAATGGACATGATCAAGGAGCAGGGAAGAAGTGGGACTCGTCAGAAGAAGACGACCTGGATGGCTACAAAGAGCTAGGACAGAGTAAATGGTCAAAAGATTTTGATGAGGATACCGAGAAGTCTGACCATGCAGAAGGAAGTACGCATGCTCTTTCTGGATTGGCTCAAACCTACAGCACGCATCGAAAAACAGTTACCTGGGGAGATTGGGCTAAAAAAGGGTGGTTTTTTTATTGGTGCAGCTAAAAGAAGACTCACTTCTTCATTAATCATAGGAGCCGGATCAGGGTAAAATTTGGTTTCCAACCCCCTTGGGCTGGAAAATAATTTCCAAGCAGGGCAAAGGGGGGTAATCAACACCGATACAAAAGAAAGGATTCAGCGAACAACTTCGTGACGAAGGTGAATCCTTCAGGGGCAGTTTTTCGATAAGAGGAGGCAGGGCGTCGGAGTTTTTGGCAACGGAGATGGCGAGTGATCCTCGACAAGAAGCCTCCAATGGCCTCTCTCGATGGTCAGGATACTCTAGGCATGGTTTGGCCATCAGTTTTGCTTCGGAATCAGTTTTGCTTCGTTGCAATTCTGCGGCTCGGAATGTACTGCTGCTGCCTGGCTCCTTTTTCCCAATTTCCCCATTCACACAGTTCACGGAGAGCCCTTGTTCCGGCCTTGTGCCTTGTCCATGTGTACCCCTTTGGTCACAAACAGAAGGTAACGGGGAATGCAGATTTGTGGCACTGTTGTATCTGTAAGCTGTCCCAATACCCAGAGGCTGCTAGTTAAAAAGCGCCCCCATAGAATGTAGCACTATCAGAAATGCTCAATTCTTGTTATTTAATATAGAGGTTTTCCAGAGTAGTACTATATTTGTAGTAGTGTTCTTATCATGTAGTCTTTACTTATTATGACTGCAGCCTGATGTCTATAAATACAAGGCACATGGTAGGAAGAGCCATATATACCTGTCTGAAATTTCAGTACTGTTGATTTTCAGTTTGAGTATAAAGTGTACCATTCAATACTCTATATATGTGTGTCTAAACATTTGATGTGATGGGTGAAAAGTTATTGT                        ]
[-] EMBL CB676222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTT GTTTCCAACCCC  TGGGCT GAAGATAA TTCCAAGCA GGCAAA GGGGGTAATCAACACCGATAC AAAGAAGCGATTCAGCGAACAACTTCGTGACGAAGGTGAATCCTTCA GGGCAG TTTTCGATAAGAGGAGGCAGCGCGTCGGAGTTTTTGGCAACGGAGATGGCGAGTGATCCTCGACAAGAAGCCTCCAATGGCCTCTCTCGATGGTCAGGATACTCTAGGCATGGTTTGGCCATCAGTTTTGCTTCGGAATCAGTTTTGCTTCGTTGCAATTCTGCGGCTCGGAATGTACTGCTGCTGCCTGGCTCCTTTTTCCCAATTTCCCCATTCACACAGTTCACGGAGAGCCCTTGTTCCGGCCTTGTGCCTTGTCCATGTGTACCCCTTTGGTCACAAACAGAAGGTAACGGGGAATGCAGATTTGTGGCACTGTTGTATCTGTAAGCTGTCCCAATACCCAGAGGCTGCTAGTTAAAAAGCGCCCCCATAGAATGTAGCACTATCAGAAATGCTCAATTCTTGTTATTTAATATAGAGGTTTTCCAGAGTAGTACTATATTTGTAGTAGTGTTCTTATCATGTAGTCTTTACTTATTATGACTGCAGCCTGATGTCTATAAATACAAGGCACATGGTAGGAAGAGCCATATATACCTGTCTGAAATTTCAGTACTGTTGATTTTCAGTTTGAGTATAAAGTGTACCATTCAATACTCTATATATGTGTGTCTAAACATTTGATGTGATGGGTGAAAAGTTATTGTTTTGGGAACTAAACAGGGGCGGGT]


>consensus_4083#0 GGACCATCCATGGCGGTTCCCCGCCGGCGACGAGCTCTGCCCGGTCTGCGCCGCGCCGCA CTTCCCCTTCTGCCCGCCTCCGCCCCACCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCC GCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCA CCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTA CGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCAGCCGGGGATGGTTCCCGTGGA GGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGNCGCCCTCCGTTTCCGCCGCCGCC TGGGATGTTGCACGGCGAACCGTACCACCTCCTGATCGGTTCGGTTAGGGAGGAGGGAGA GGTTATCCTCCTCCTCAAAATAATGAAAATCCCTATGGGAATGAGGGCAGTTTTCCCGGA TTAAGAAGCCGGCGGGGAGGTTCCAACCGGGGCTTGAAAGGTTGGCGGCCTAAGGTTAAA TTTTGGGGCCGGGAGGACCTAAGGGGGGTTTTTCAAACAAGGATCACGGTTACAATGGTT TCAAAGGCTGGAAATGGCTGGTGGGGCGGCGGCCCCTTCAACGGGCTTGATACCTGGAGG GGAAAACCGGTAATGATTCCAAGGGTGGGATTCCGGAGGGGGATGTCCACCACACAACAA CACGGAAGCTCCGGTACGTTTCCTAAATTACAAGCAAACCACTTTGAGGCGGAAATATTT GTTCTATTATCGGTTCTCAGCGCACTGGGGCCCACTAGTCTATATTTGATCAGCTCACCT GATGCCTAATGCAAATCGTTACAATGGACCTATCCACAATGAGGTACCAGGTTTGGCATA TCAACCACACTTAGAGCAACATTTAGGAGGTGGAAGGCAAACCCAAGCTCAGCATTCCAT CAACAATGCTAAAATCAGTGTAATTAGTGCCTGTGACTTGTTCAAGCAGCCACTTCGTGG GTCACGGCCTGATCATATTGTTATCATCCTCCGGGGGCTGCCAGGTAGTGGAAAGAGCTA TCTTGCAAAGGGATTGCGTGACCTTGAAGTTGAGAATGGTGGAAATGCACCTAGAATTCA TTCGATGGATGACTATTTCATGATTGAGGTTGAGAAGAAAGTTGAAGACAATGAAGGGTC AAAATCTTCTAGTACATCCAAAGGAAGAAAGCAGCTGACCAAGAAAGTGATCGAGTACTG TTATGAGCCTGAGATGGAGGAGACGTACAGATCAAGCATGTTGAACGCATTTAAGAAGAC CCTTGATGAAGGGAATTTTACATTTGTGATTGTGGATGACCGCAATCTGCGGGTAGCTGA TTTGGCTCAATTTGGGGCAAGTGCGAAGAAATCAGGCTATGAAGTGTACCTGCTGGAGGC ACCATACAAGGATCCAACAGGCTGTGCTGCTAGGAATGTGCATGGGTTTACAGTAGATGA TGTGAACAAGATGGCAGCAGACTGGGAAGAGGCTCCACCACTATATCTTCGACTAGACAT CCATTCATTATTCAACGATGACCATCTACGCGAGCATTCCATTCAAGAGGTGGATATGGA GACAGAAGACACTGATGGGGCCCCTAACACAGCAACTAGTACTGAAGCTGAAAACACACA GAAGGCTGTGTCTGAATCACTAGATAATGGACATGATCAAGGAGCAGGGAAGAAGTGGGA CTCGTCAGAAGAAGACGACCTGGATGGCTACAAAGAGCTAGGACAGAGTAAATGGTCAAA AGATTTTGATGAGGATACCGAGAAGTCTGACCATGCAGAAGGAAGTACGCATGCTCTTTC TGGATTGGCTCAAACCTACAGCACGCATCGAAAAACAGTTACCTGGGGAGATTGGGCTAA AAAAGGGTGGTTTTTTTATTGGTGCAGCTAAAAGAAGACTCACTTCTTCATTAATCATAG GAGCCGGATCAGGGTAAAATTTGGTTTCCAACCCCCTTGGGCTGGAAAATAATTTCCAAG CAGGGCAAAGGGGGGTAATCAACACCGATACAAAAGAAAGGATTCAGCGAACAACTTCGT GACGAAGGTGAATCCTTCAGGGGCAGTTTTTCGATAAGAGGAGGCAGGGCGTCGGAGTTT TTGGCAACGGAGATGGCGAGTGATCCTCGACAAGAAGCCTCCAATGGCCTCTCTCGATGG TCAGGATACTCTAGGCATGGTTTGGCCATCAGTTTTGCTTCGGAATCAGTTTTGCTTCGT TGCAATTCTGCGGCTCGGAATGTACTGCTGCTGCCTGGCTCCTTTTTCCCAATTTCCCCA TTCACACAGTTCACGGAGAGCCCTTGTTCCGGCCTTGTGCCTTGTCCATGTGTACCCCTT TGGTCACAAACAGAAGGTAACGGGGAATGCAGATTTGTGGCACTGTTGTATCTGTAAGCT GTCCCAATACCCAGAGGCTGCTAGTTAAAAAGCGCCCCCATAGAATGTAGCACTATCAGA AATGCTCAATTCTTGTTATTTAATATAGAGGTTTTCCAGAGTAGTACTATATTTGTAGTA GTGTTCTTATCATGTAGTCTTTACTTATTATGACTGCAGCCTGATGTCTATAAATACAAG GCACATGGTAGGAAGAGCCATATATACCTGTCTGAAATTTCAGTACTGTTGATTTTCAGT TTGAGTATAAAGTGTACCATTCAATACTCTATATATGTGTGTCTAAACATTTGATGTGAT GGGTGAAAAGTTATTGTTTTGGGAACTAAACAGGGGCGGGT



consensusID : consensus_4083#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 605
fasta sequence
                              [ACGATCTCCACCCGCCTCCGCCCCCTCCTCCGCCGGAGTACCACGCCCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCCGCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCACCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTACGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCCGCCGGGGATGGTTCCCGTGGAGGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGCCGCCCTCCGTTTCCGCCGCCGCCTGGGATGTTGCACGGAGAACCGCACCCACCTCCTGATCGGTTCGGCCATGGAGGAGGGAGAGGCTATCCTCCTCCTCCAAATTATGAGAATCCCTATGCGCATGGAGGCAGGTTTCCCCATTACGAGCACGCCGGGAGGTTTCCACCTGCACATGAAAGGCTTGCCCCCTTAGGTTCAAGTTTTGTGCCTGGAGGACCTCTGGAGGGGTATTTCAACCATGATCACCGCTACAATCTCTTCCAACGCTCGGAATCGCCTGTTGAGCCGCCGCTCCGTCACTGGATC]

[+] EMBL CB676221             [ACGATCTCCACCCGCCTCCGCCCCCTCCTCCGCCGGAGTACCACGCCCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCCGCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCACCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTACGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCCGCCGGGGATGGTTCCCGTGGAGGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGCCGCCCTCCGTTTCCGCCGCCGCCTGGGATGTTGCACGGAGAACCGCACCCACCTCCTGATCGGTTCGGCCATGGAGGAGGGAGAGGCTATCCTCCTCCTCCAAATTATGAGAATCCCTATGCGCATGGAGGCAGGTTTCCCCATTACGAGCACGCCGGGAGGTTTCCACCTGCACATGAAAGGCTTGCCCCCTTAGGTTCAAGTTTTGTGCCTGGAGGACCTCTGGAGGGGTATTTCAACCATGATCACCGCTACAATCTCTTCCAACGCTCGGAATCGCCTGTTGAGCCGCCGCTCCGTCACTGGATC]


>consensus_4083#1 ACGATCTCCACCCGCCTCCGCCCCCTCCTCCGCCGGAGTACCACGCCCCCTTCCACCCTC CTCCTCCTCCTCCTCCCCCGCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGT GGGCCCCCCCGGGGCCGCACCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGA TGCGCGTGGGCGATCCGTACGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCCGC CGGGGATGGTTCCCGTGGAGGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGCCGCC CTCCGTTTCCGCCGCCGCCTGGGATGTTGCACGGAGAACCGCACCCACCTCCTGATCGGT TCGGCCATGGAGGAGGGAGAGGCTATCCTCCTCCTCCAAATTATGAGAATCCCTATGCGC ATGGAGGCAGGTTTCCCCATTACGAGCACGCCGGGAGGTTTCCACCTGCACATGAAAGGC TTGCCCCCTTAGGTTCAAGTTTTGTGCCTGGAGGACCTCTGGAGGGGTATTTCAACCATG ATCACCGCTACAATCTCTTCCAACGCTCGGAATCGCCTGTTGAGCCGCCGCTCCGTCACT GGATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4083#0      GGACCATCCATGGCGGTTCCCCGCCGGCGACGAGCTCTGCCCGGTCTGCGCCGCGCCGCA 60
consensus_4083#1      ----------------------------------------ACGATCTCCACCCGCCTCCG 20
                                                               ** *** * **   *  * 

consensus_4083#0      CTTCCCCTTCTGCCCGCCTCCGCCCCACCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCC 120
consensus_4083#1      CCCCCTCCTCCGCCGGAGTAC-CACGCCCCCTTCCACCCTCCTCCTCCTCCTCCTCCCCC 79
                      *  ** * ** *** *  * * * *  *********************************

consensus_4083#0      GCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCA 180
consensus_4083#1      GCCGGAGTATCACGTCCCCTTCCACCCTCCGCCGCCGATGTGGGCCCCCCCGGGGCCGCA 139
                      ************************************************************

consensus_4083#0      CCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTA 240
consensus_4083#1      CCCCTACGAGGTCCTCGACATGGAGGCCCCCCACAAGCGGATGCGCGTGGGCGATCCGTA 199
                      ************************************************************

consensus_4083#0      CGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCAGCCGGGGATGGTTCCCGTGGA 300
consensus_4083#1      CGGCGACGGGATGCCTCCCCCGCTGCCCCCGCCGCCGCCGCCGGGGATGGTTCCCGTGGA 259
                      ************************************** *********************

consensus_4083#0      GGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGNCGCCCTCCGTTTCCGCCGCCGCC 360
consensus_4083#1      GGGCGACCGGCTGCTCGGCTTGATCCGGGATCACGGCCGCCCTCCGTTTCCGCCGCCGCC 319
                      ************************************ ***********************

consensus_4083#0      TGGGATGTTGCACGGCGAACCGTACC-ACCTCCTGATCGGTTCGGTTAGGGAGGAGGGAG 419
consensus_4083#1      TGGGATGTTGCACGGAGAACCGCACCCACCTCCTGATCGGTTCGGCCATGGAGGAGGGAG 379
                      *************** ****** *** ******************  * ***********

consensus_4083#0      AGGTTATCCTCCTCCTCAAAATAATGAAAATCCCTATGGGAATGAGGGCAGTTTTCCCGG 479
consensus_4083#1      AGGCTATCCTCCTCCTCCAAATTATGAGAATCCCTATGCGCATGGAGGCAGGTTTCCCC- 438
                      *** ************* **** **** ********** * ***  ***** ******  

consensus_4083#0      ATTAAGAAGCCGGCGGGGAGGTTCCAACCGGGGCTTGAAAGGTTGGCGGCCTAAGGTTAA 539
consensus_4083#1      ATTACGA-GCACGCCGGGAGGTTTCCACCTGCACATGAAAGGCTTGCCCCCTTAGGTTCA 497
                      **** ** **  ** ******** * *** *  * ******* * **  *** ***** *

consensus_4083#0      ATTTTGGGGCCGGGAGGACCTAAGGGGGGTTTTTCAAACAAGGATCACGGTTACAATGGT 599
consensus_4083#1      AGTTTTGTGCCTGGAGGACCTCTGGAGGGGTATTTCAACCATGATCACCGCTACAATCTC 557
                      * *** * *** *********  ** *** * **  *** * ****** * ******   

consensus_4083#0      TTCAAAGGCTGGAAATGGCTGGTGGGGCGGCGGCCCCTTCAACGGGCTTGATACCTGGAG 659
consensus_4083#1      TTCCAACGCTCGGAATCGCCTGTTGAGCCGCCGCTCCGTCACTGGATC------------ 605
                      *** ** *** * *** **  ** * ** ** ** ** ***  **               

consensus_4083#0      GGGAAAACCGGTAATGATTCCAAGGGTGGGATTCCGGAGGGGGATGTCCACCACACAACA 719
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ACACGGAAGCTCCGGTACGTTTCCTAAATTACAAGCAAACCACTTTGAGGCGGAAATATT 779
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TGTTCTATTATCGGTTCTCAGCGCACTGGGGCCCACTAGTCTATATTTGATCAGCTCACC 839
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TGATGCCTAATGCAAATCGTTACAATGGACCTATCCACAATGAGGTACCAGGTTTGGCAT 899
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ATCAACCACACTTAGAGCAACATTTAGGAGGTGGAAGGCAAACCCAAGCTCAGCATTCCA 959
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TCAACAATGCTAAAATCAGTGTAATTAGTGCCTGTGACTTGTTCAAGCAGCCACTTCGTG 1019
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      GGTCACGGCCTGATCATATTGTTATCATCCTCCGGGGGCTGCCAGGTAGTGGAAAGAGCT 1079
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ATCTTGCAAAGGGATTGCGTGACCTTGAAGTTGAGAATGGTGGAAATGCACCTAGAATTC 1139
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ATTCGATGGATGACTATTTCATGATTGAGGTTGAGAAGAAAGTTGAAGACAATGAAGGGT 1199
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      CAAAATCTTCTAGTACATCCAAAGGAAGAAAGCAGCTGACCAAGAAAGTGATCGAGTACT 1259
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      GTTATGAGCCTGAGATGGAGGAGACGTACAGATCAAGCATGTTGAACGCATTTAAGAAGA 1319
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      CCCTTGATGAAGGGAATTTTACATTTGTGATTGTGGATGACCGCAATCTGCGGGTAGCTG 1379
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ATTTGGCTCAATTTGGGGCAAGTGCGAAGAAATCAGGCTATGAAGTGTACCTGCTGGAGG 1439
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      CACCATACAAGGATCCAACAGGCTGTGCTGCTAGGAATGTGCATGGGTTTACAGTAGATG 1499
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ATGTGAACAAGATGGCAGCAGACTGGGAAGAGGCTCCACCACTATATCTTCGACTAGACA 1559
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TCCATTCATTATTCAACGATGACCATCTACGCGAGCATTCCATTCAAGAGGTGGATATGG 1619
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      AGACAGAAGACACTGATGGGGCCCCTAACACAGCAACTAGTACTGAAGCTGAAAACACAC 1679
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      AGAAGGCTGTGTCTGAATCACTAGATAATGGACATGATCAAGGAGCAGGGAAGAAGTGGG 1739
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ACTCGTCAGAAGAAGACGACCTGGATGGCTACAAAGAGCTAGGACAGAGTAAATGGTCAA 1799
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      AAGATTTTGATGAGGATACCGAGAAGTCTGACCATGCAGAAGGAAGTACGCATGCTCTTT 1859
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      CTGGATTGGCTCAAACCTACAGCACGCATCGAAAAACAGTTACCTGGGGAGATTGGGCTA 1919
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      AAAAAGGGTGGTTTTTTTATTGGTGCAGCTAAAAGAAGACTCACTTCTTCATTAATCATA 1979
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      GGAGCCGGATCAGGGTAAAATTTGGTTTCCAACCCCCTTGGGCTGGAAAATAATTTCCAA 2039
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      GCAGGGCAAAGGGGGGTAATCAACACCGATACAAAAGAAAGGATTCAGCGAACAACTTCG 2099
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TGACGAAGGTGAATCCTTCAGGGGCAGTTTTTCGATAAGAGGAGGCAGGGCGTCGGAGTT 2159
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TTTGGCAACGGAGATGGCGAGTGATCCTCGACAAGAAGCCTCCAATGGCCTCTCTCGATG 2219
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      GTCAGGATACTCTAGGCATGGTTTGGCCATCAGTTTTGCTTCGGAATCAGTTTTGCTTCG 2279
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TTGCAATTCTGCGGCTCGGAATGTACTGCTGCTGCCTGGCTCCTTTTTCCCAATTTCCCC 2339
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      ATTCACACAGTTCACGGAGAGCCCTTGTTCCGGCCTTGTGCCTTGTCCATGTGTACCCCT 2399
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TTGGTCACAAACAGAAGGTAACGGGGAATGCAGATTTGTGGCACTGTTGTATCTGTAAGC 2459
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TGTCCCAATACCCAGAGGCTGCTAGTTAAAAAGCGCCCCCATAGAATGTAGCACTATCAG 2519
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      AAATGCTCAATTCTTGTTATTTAATATAGAGGTTTTCCAGAGTAGTACTATATTTGTAGT 2579
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      AGTGTTCTTATCATGTAGTCTTTACTTATTATGACTGCAGCCTGATGTCTATAAATACAA 2639
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      GGCACATGGTAGGAAGAGCCATATATACCTGTCTGAAATTTCAGTACTGTTGATTTTCAG 2699
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TTTGAGTATAAAGTGTACCATTCAATACTCTATATATGTGTGTCTAAACATTTGATGTGA 2759
consensus_4083#1      ------------------------------------------------------------
                                                                                  

consensus_4083#0      TGGGTGAAAAGTTATTGTTTTGGGAACTAAACAGGGGCGGGT 2801
consensus_4083#1      ------------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)