cluster # 4088

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Oryza sativa
cluster # 4088 cluster # 4088 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4088#0 length = 616 sequences # 3

consensusID : consensus_4088#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 616
fasta sequence

                              [GGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCATTCCATCGAGGAA-GGAGAAGTACTCGGAACGGGGACGATCGTCGAGATGGG--CACAGTG-ATGTGGGGAT-GCA-GTTAATATATTTGTGCAGGTTCTTCG-AAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAACAATTGGAGATGATTTGACAAGATTATGAAGGGC-AGATTCCAGAGGTTTTATATGCCAAGGCGCTAAGTTGTTCAGGCACCA-TT-GCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGA-GTTTTCTTTTGTAAAACCAACCCTGGCTAATGT-AAACTAATGTAATGCA-ATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAG-TTTAT-CAAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGATGATCAAAGTTGAGAGAGCTTAC-ACATGAGATG-AACTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTATTTGGGAAAGATAAAAA]

[+] EMBL CA766540             [GGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCATTCCATCGAGGAA GGAGAAGTACTCGGAACGGGGACGATCGTCGAGATGGG  CACAGTG ATGTGGGGAT GCA GTTAATATATTTGTGCAGGTTCTTCG AAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAACAATTGGAGATGATTTGACAAGATTATGAAGGGC AGATTCCAGAGGTTTTATATGCCAAGGCGCTAAGTTGTTCAGGCACCA TT GCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGA GTTTTCTTTTGTAAAACCAACCCTGGCTAATGT AAACTAATGTAATGCA ATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAG TTTAT CAAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGACGATCAAAGTTGAGAGAGCTTACAACATGAGATGNCGCTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTA                 ]
[+] EMBL BI809805             [                                   CATCGAGAAAGGGAGAAGTACTCGGATCGGGGACGATCGTCGAGATGGGCACACAGTGAATGTGGGGATCCCACGTTAATATATTTGTGCAGGTTCTTCGAAAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAAC ATTGGAGATGATTTGACAAGATTATGAAGGACAAGATTCCAGAGGTTTTATATGCCAAGGCGCTAAGTTGTTCAGGCACCAGTTGGCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGAGGTTTTCTTTTGTAAAAACCACCCTGGCTAATGTAAAACTAATGTAATGCACATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAGTTTTATCCGAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGATGATCAAAGTTGAGAGAGCTTAC ACATGAGATG AACTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTATTTGGGAAAGATAAAAA]
[+] EMBL BI809936             [                                                                                                                                                                                                                                                                                                                                               AATGT AAACTAATGTAATGCA ATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAG TTTAT CAAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGATGATCAAAGTTGAGAGAGCTTAC ACATGAGATG AACTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTATTTGGGAAAGATAAAAA]




>consensus_4088#0
GGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCATTCCATCGAGGAAGGAGAAGTACTCGGA
ACGGGGACGATCGTCGAGATGGGCACAGTGATGTGGGGATGCAGTTAATATATTTGTGCA
GGTTCTTCGAAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAACAATTGG
AGATGATTTGACAAGATTATGAAGGGCAGATTCCAGAGGTTTTATATGCCAAGGCGCTAA
GTTGTTCAGGCACCATTGCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGAGTTT
TCTTTTGTAAAACCAACCCTGGCTAATGTAAACTAATGTAATGCAATGGAGCTTTCAACT
CTGGTAGAAATTTCACTGTTTGCTTGTAAAGTTTATCAAAAAATTGCATGGTGGACAGAC
TCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCAT
GGAGATGATCAAAGTTGAGAGAGCTTACACATGAGATGAACTCTCAAATATCCCATTTGC
TTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTAT
TTGGGAAAGATAAAAA

clustalw multiple alignements is not computed in this case