cluster # 4090

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Oryza sativa
cluster # 4090 cluster # 4090 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4090#0 length = 1581 sequences # 3
consensusID : consensus_4090#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1581
fasta sequence
                              [CACTCAGACCGCCCGAGCTCGCCGCCGGGAAACCAATGGCCGCCGCCACCGTCGCAGCCTCCTCCCGCTTCGGCCCCGCCCACCTGCTTCCCCGCTCCCGCAGGAAGGGGAGGGCCCCCGCGCCGAGCGCGCGCGCCACGGCCTGCGGAGCCGTCGGGCGAGGCCGCCGGCTGCGCTGCGAGTTCGTGGCCGGCGGCGGGAACGGCGCGCTCTCCGGGGAGGACGACCCGCGCCTCATAGACCGCCAAAAAGCTCTTGATGCAGCCATGAATGACATAAACAGCTCCTTTGGAAAAGGCAGTGTTACAAGATTAGGAAGCGCGGGTGGTGCCTTTGTTGAGACATTTCCAAGTGGCTGCTTGACACTAGATTTTGCCTTGGGTGGTGGCCTTCCAAAAGGAAGAGTAGTAGAGGTGTATGGTCCAGAAAGCAGTGGAAAGACTACTCTAGCGCTGCATGCCATTGCTGAAGTACAGAAATTGGGAGGCAATGCCATGCTTGTGGATGCAGAGCATGCTTTTGATCCAGCTTATTCTAAAGCACTTGGGGTAGATATTGAAAATCTGATTGTATGCCAGCCAGACAATGGAGAGATGGCACTAGAAATTGCGGACCGCATGTGCAGATCTGGAGCTATCGATCTCATCTGTATTGATTCAGTGTCAGCTCTCACTCCGCGTGCAGAAATTGAAGGTGAGATAGGGATGCAGCAGATGGGTTTACAAGCACGTCTAATGAGTCAAGCATTGAGAAAGATGTCAGGCAATGCCTCAAAGGCTGGTTGTACTCTTATGTTCTTGAATCAAATAAGATACAAGATTGGAGTATTTTATGGTAATCCTGAAGTCACTAGTGGAGGGATAGCTTTGAAATTCTTCGCATCAGTTCGACTAGAGATACGGC-CCATTGGCAAGATAAAATCTGCCAAGGGAGATGAAGATGTGGGTGTGAAGGTTCGTGTCAGAGTGCAGAAGAGTAAAGTCTCCAGACCCTACAAGCAA-GCTGAATTTGAGATCATCTTTGGGGAGGGCGTTAGTAAACTGGGATGTGTTCTTGATTGTGCTGAGCTGATGGAAGTCGTTGCAAAGAAAGGCTCATGGTATAGCTACAAAGAAATGAGATTGGGTCAAGGCAGAGAAAAAGCACTGCAGTATCTCCGAGAGAGCCCTACCATCTGTGATGAGATAGAAAAGGCTGTTCGAGCCATGATACCAGAAGGAGCAAGACATATGAGCCTGCTCGCTTTCGGGCGGTCATCATTGACCGAAGAAGAACAAGTAGACGATGAGTGATGGATGCATCTAATTTTGAAGATGAAAGTGCTGAGCAATTCCAAGCTTTTGGGTCCCCTGGTGAACGGAGAAGACCAAGAGTGGCTCTTTCTTGAACTAATCAAGCATTGCATTGCTGGTAGTGGTAGGGAGTTGGGATTCCTTAAGAGTTTGATTTGTGAGCAATCATTTGCTGCAACAGCATTGTGATGCCATATGTACCGTTGTTGGTATGCACTTGGTGTAAGGAAAAGGTCACTGATTCTCAATCAATGAAGCTTCAATTTCTGTCAA-------AAAAAAAAAAAAAAAA]

[+] EMBL AK099587             [CACTCAGACCGCCCGAGCTCGCCGCCGGGAAACCAATGGCCGCCGCCACCGTCGCAGCCTCCTCCCGCTTCGGCCCCGCCCACCTGCTTCCCCGCTCCCGCAGGAAGGGGAGGGCCCCCGCGCCGAGCGCGCGCGCCACGGCCTGCGGAGCCGTCGGGCGAGGCCGCCGGCTGCGCTGCGAGTTCGTGGCCGGCGGCGGGAACGGCGCGCTCTCCGGGGAGGACGACCCGCGCCTCATAGACCGCCAAAAAGCTCTTGATGCAGCCATGAATGACATAAACAGCTCCTTTGGAAAAGGCAGTGTTACAAGATTAGGAAGCGCGGGTGGTGCCTTTGTTGAGACATTTCCAAGTGGCTGCTTGACACTAGATTTTGCCTTGGGTGGTGGCCTTCCAAAAGGAAGAGTAGTAGAGGTGTATGGTCCAGAAAGCAGTGGAAAGACTACTCTAGCGCTGCATGCCATTGCTGAAGTACAGAAATTGGGAGGCAATGCCATGCTTGTGGATGCAGAGCATGCTTTTGATCCAGCTTATTCTAAAGCACTTGGGGTAGATATTGAAAATCTGATTGTATGCCAGCCAGACAATGGAGAGATGGCACTAGAAATTGCGGACCGCATGTGCAGATCTGGAGCTATCGATCTCATCTGTATTGATTCAGTGTCAGCTCTCACTCCGCGTGCAGAAATTGAAGGTGAGATAGGGATGCAGCAGATGGGTTTACAAGCACGTCTAATGAGTCAAGCATTGAGAAAGATGTCAGGCAATGCCTCAAAGGCTGGTTGTACTCTTATGTTCTTGAATCAAATAAGATACAAGATTGGAGTATTTTATGGTAATCCTGAAGTCACTAGTGGAGGGATAGCTTTGAAATTCTTCGCATCAGTTCGACTAGAGATACGGC CCATTGGCAAGATAAAATCTGCCAAGGGAGATGAAGATGTGGGTGTGAAGGTTCGTGTCAGAGTGCAGAAGAGTAAAGTCTCCAGACCCTACAAGCAA GCTGAATTTGAGATCATCTTTGGGGAGGGCGTTAGTAAACTGGGATGTGTTCTTGATTGTGCTGAGCTGATGGAAGTCGTTGCAAAGAAAGGCTCATGGTATAGCTACAAAGAAATGAGATTGGGTCAAGGCAGAGAAAAAGCACTGCAGTATCTCCGAGAGAGCCCTACCATCTGTGATGAGATAGAAAAGGCTGTTCGAGCCATGATACCAGAAGGAGCAAGACATATGAGCCTGCTCGCTTTCGGGCGGTCATCATTGACCGAAGAAGAACAAGTAGACGATGAGTGATGGATGCATCTAATTTTGAAGATGAAAGTGCTGAGCAATTCCAAGCTTTTGGGTCCCCTGGTGAACGGAGAAGACCAAGAGTGGCTCTTTCTTGAACTAATCAAGCATTGCATTGCTGGTAGTGGTAGGGAGTTGGGATTCCTTAAGAGTTTGATTTGTGAGCAATCATTTGCTGCAACAGCATTGTGATGACATATGTACCGTTGTTGGTATGCACTTGGTGTAAGGAAAAGGTCACTG                                                        ]
[-] EMBL CA763758             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGGCTAGAGATA GGCGCCATTGGCCAGAT AAATCTGCCAAGGGAGATAAAGATGTGGGTGTGAAGGTTCGTGTCAGAGTCCAGAAGAGTAAAGTCTCCAGACCCTACAAGCAAGGCTGAATTTGAGATCATCTTTGGGGAGGGCGTTAGTAAACTGGGATGTGTTCTTGATTGTGCTGAGCTGATGGAAGTCGTTGCAAAGAAAGGCTCATGGTATAGCTACAAAGAAATGAGATTGGGTCAAGGCAGAGAAAAAGCACTGCAGTATCTCCGAGAGAGCCCTACCATCTGTGATGAGATAGAAAAGGCTGTTCGAGCCATGATACCAGAAGGAGCAAGACATATGAGCCTGCTCGCTTTCGGGCGGTCATCATTGACCGAAGAAGAACAAGTAGACGATGAGTGATGGATGCATCTAATTTTGAAGATGAAAGTGCTGAGCAATTCCAAGCTTTTGGGTCCCCTGGTGAACGGAGAAGACCAAGAGTGGCTCTTTCTTGAACTAATCAAGCATTGCATTGCTGGTAGTGGTAGGGAGTTGGGATTCCTTAAGAGTTTGATTTGTGAGCAATCATTTGCTGCAACAGCATTGTGATGCCATATGTACCGTTGTTGGTATGCCCTTGGTGTAAGGAAAAGGTCCCTGATTCTCAATCAATGAAGCTTCAATTTCTGTCAA       AAAAAAAAAAAAAAAA]
[-] EMBL CA763152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAGAGATACGGC CCATTGGCAAGATAAAATCTGCCAAGGGAGATGAAGATGTGGGTGTGAAGGTTCGTGTCAGAGTGCAGAAGAGTAAAGTCTCCAGACCCTACAAGCAA GCTGAATNTGAGATCATCTTTGGGGAGGGCGTTAGTAAACTGGGATGTGTTCTTGATTGTGCTGAGCTGATGGAAGTCGTTGCAAAGAAAGGCTCATGGTATAGCTACAAAGAAATGAGATTGGGTCAAGGCAGAGAAAAAGCACTGCAGTATCTCCGAGAGAGCCCTACCATCTGTGATGAGATAGAAAAGGCTGTTCGAGCCATGATACCAGAAGGAGCAAGACATATGAGCCTGCTCGCTTTCGGGCGGTCATCATTGACCGAAGAAGAACAAGTAGACGATGAGTGATGGATGCATCTAATTTTGAAGATGAAAGTGCTGAGCAATTCCAAGCTTTTGGGTCCCCTGGTGAACGGAGAAGACCAAGAGTGGCTCTTTCTTGAACTAATCAAGCATTGCATTGCTGGTAGTGGTAGGGAGTTGGGATTCCTTAAGAGTTTGATTTGTGAGCAATCATTTGCTGCAACAGCATTGTGATGCCATATGTACCGTTGTTGGTATGCACTTGGTGTAAGGAAAAGGTCACTGATTCTCAATCAATGAAGCTTCAATTTCTGTCAATTTGTTCAAAAAAAAAAAA    ]




>consensus_4090#0
CACTCAGACCGCCCGAGCTCGCCGCCGGGAAACCAATGGCCGCCGCCACCGTCGCAGCCT
CCTCCCGCTTCGGCCCCGCCCACCTGCTTCCCCGCTCCCGCAGGAAGGGGAGGGCCCCCG
CGCCGAGCGCGCGCGCCACGGCCTGCGGAGCCGTCGGGCGAGGCCGCCGGCTGCGCTGCG
AGTTCGTGGCCGGCGGCGGGAACGGCGCGCTCTCCGGGGAGGACGACCCGCGCCTCATAG
ACCGCCAAAAAGCTCTTGATGCAGCCATGAATGACATAAACAGCTCCTTTGGAAAAGGCA
GTGTTACAAGATTAGGAAGCGCGGGTGGTGCCTTTGTTGAGACATTTCCAAGTGGCTGCT
TGACACTAGATTTTGCCTTGGGTGGTGGCCTTCCAAAAGGAAGAGTAGTAGAGGTGTATG
GTCCAGAAAGCAGTGGAAAGACTACTCTAGCGCTGCATGCCATTGCTGAAGTACAGAAAT
TGGGAGGCAATGCCATGCTTGTGGATGCAGAGCATGCTTTTGATCCAGCTTATTCTAAAG
CACTTGGGGTAGATATTGAAAATCTGATTGTATGCCAGCCAGACAATGGAGAGATGGCAC
TAGAAATTGCGGACCGCATGTGCAGATCTGGAGCTATCGATCTCATCTGTATTGATTCAG
TGTCAGCTCTCACTCCGCGTGCAGAAATTGAAGGTGAGATAGGGATGCAGCAGATGGGTT
TACAAGCACGTCTAATGAGTCAAGCATTGAGAAAGATGTCAGGCAATGCCTCAAAGGCTG
GTTGTACTCTTATGTTCTTGAATCAAATAAGATACAAGATTGGAGTATTTTATGGTAATC
CTGAAGTCACTAGTGGAGGGATAGCTTTGAAATTCTTCGCATCAGTTCGACTAGAGATAC
GGCCCATTGGCAAGATAAAATCTGCCAAGGGAGATGAAGATGTGGGTGTGAAGGTTCGTG
TCAGAGTGCAGAAGAGTAAAGTCTCCAGACCCTACAAGCAAGCTGAATTTGAGATCATCT
TTGGGGAGGGCGTTAGTAAACTGGGATGTGTTCTTGATTGTGCTGAGCTGATGGAAGTCG
TTGCAAAGAAAGGCTCATGGTATAGCTACAAAGAAATGAGATTGGGTCAAGGCAGAGAAA
AAGCACTGCAGTATCTCCGAGAGAGCCCTACCATCTGTGATGAGATAGAAAAGGCTGTTC
GAGCCATGATACCAGAAGGAGCAAGACATATGAGCCTGCTCGCTTTCGGGCGGTCATCAT
TGACCGAAGAAGAACAAGTAGACGATGAGTGATGGATGCATCTAATTTTGAAGATGAAAG
TGCTGAGCAATTCCAAGCTTTTGGGTCCCCTGGTGAACGGAGAAGACCAAGAGTGGCTCT
TTCTTGAACTAATCAAGCATTGCATTGCTGGTAGTGGTAGGGAGTTGGGATTCCTTAAGA
GTTTGATTTGTGAGCAATCATTTGCTGCAACAGCATTGTGATGCCATATGTACCGTTGTT
GGTATGCACTTGGTGTAAGGAAAAGGTCACTGATTCTCAATCAATGAAGCTTCAATTTCT
GTCAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case