These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4094#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 752 fasta sequence [CTCTCTCGACTTCTCGAATGGTCTCGACCATCTTCGCTAAACCCTTCCTTGGTCGCCGCCGCGCCGCAAAGCCTCCGTCCGTTCCGCACCGCCGCTCTCTTCCCCGCCACCGTCGGTCGCTGGCTGAGTATGGCGGCGGCCGCTGCTCGCGCCGGGTTCCGGCGGATGTTCTCCGTCTCGGGCTTCACGCCGCCGCCTCCCCCCGCCGCCCGCCCCTTGGCGGACCCCTGCAACAACCTCTTCGTCTCAGGGTTGAATAAACGCACGACATCTGACGGACTTAGGGAAGCCTTCTCGAAATTCGGTCAGGTTATTGAAGC-TAGAGT-AATCACTGATAGAATATCTGGATACT-CTCGAGGATTTGG-CTTTGTCAAATATGC-AACT-GTTG-AAGAANCCGGTGA-GGGCATAAAAGGCATGGAT-GGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTGCCTTCAT] [+] EMBL AK120874 [CTCTCTCGACTTCTCGAATGGTCTCGACCATCTTCGCTAAACCCTTCCTTGGTCGCCGCCGCGCCGCAAAGCCTCCGTCCGTTCCGCACCGCCGCTCTCTTCCCCGCCACCGTCGGTCGCTGGCTGAGTATGGCGGCGGCCGCTGCTCGCGCCGGGTTCCGGCGGATGTTCTCCGTCTCGGGCTTCACGCCGCCGCCTCCCCCCGCCGCCCGCCCCTTGGCGGACCCCTGCAACAACCTCTTCGTCTCAGGGTTGAATAAACGCACGACATCTGACGGACTTAGGGAAGCCTTCTCGAAATTCGGTCAGGTTATTGAAGC TAGAGT AATCACTGATAGAATATCTGGATACT CTCGAGGATTTGG CTTTGTCAAATATGC AACT GTTG AAGAAGCCGGTGA GGGCATAAAAGGCATGGAT GGAAAGTT CCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTGCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTGCCTTCAT] [-] EMBL AU066230 [ ACTTAGGGAACCCTTCNCGAAATTCGGNCAGGTTATTGAAGCNTAGAGTAAATCACTGATAGAATATCTGGATACTCCTCGAGGATTTGG CTTTGTCAAATATGC AACTGGTTG AAGAANCCGGTGA GGGCATAAAAGGCATGGAT GGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTG ] [-] EMBL AU066228 [ CGAGNATTTGGCCTTTGTCAAATATGCAAACT GTTGAAAAAANCCGGTNAGGGGCATAAAAGGCATGGATGGGAAAGTTCCCTCGATGGTTGGGTGATATTTGCCGAGTACGCCAAGCAGAGAGAAGCACAGCAGCCGGCCCAACCAGCAGCATCAACTAGTTACCAATACTCCAACCAATGATAGTTGTCTCTACGATCAGGATTACCTTCTATTGGACAATATTGTTCGCTATTTTACCATGTGAAAACTGAAAATCACTCTCCTTGATATTTCGTCAGGGAGAAATTTTAGTGTGCACGGCATGAACATCTCCTTAGTAACTTACGGTGCCGTTTTGTCTGCTACTGTCTGCTGGGTGACTGTACTCTGTGAGCTTATGTAACTATACAACTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||