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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4095 cluster # 4095       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4095#0 length = 1166 sequences # 3  

consensusID : consensus_4095#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1166
fasta sequence
                              [GAGGATCCAAGCAAAACAGTTTACTCTAAAACTGTCCAGATGCTTATAAAAGAGCAACCAGACGGAAACAAGTATCCTGCTGCTTTAGATGCAATAAAAGATCTAAAAATGAAAGACATGCTTCTCGTTGAGAACTACTATGCTTACCAGAGATTACTGCAAAAAATGTCTGAAAATAAGTGCCATGGTTGTATAAAATTAAAGGAGCATATTGCATTGATGAAGGAGCAAAAGGTGTACAAGGATCAGCTGAATGATTTGAAATATGAAATGTCAGATGAGGCACTTCAACAGATGCCGGAGTTTCAAGGCAGAATCGATGTACTAAAAGAAATCCATTACATTGATTCTGATCTAGTGGTGCAACTTAAGGGCCGAGTGGCCTGCGAAATGAATTCCGGCGAGGAGTTGATATCAACCGAATGTCTGTTTGAGAATCAGTTGGATGACCTAGAACCTGAAGAAGCCGTAGCTATTATGTCTGCATTGGTCTTCCAACAAAGGAATACATCAGAACCATCTCTTACCCCGAAACTAGCAGATGCCAGAAAGAGGATTTATGATACAGCAATCAGATTAGGAAAGCTNCAGAGAGAGTTCAAGGTGCCTGTAGATCCCGAGGAATATGCCCCGTGATAATCTCAAGNTTCGGTCTTGNTGAAGTCGTCTACCAAATGGGCAAANGGGACCCCATTTGCAGACATCTGNGAGCTGACAGATGTATCTGAAGGTCTCATTGTAANAACAATCGNGCGGTTGGATGAAACTTGCANGGAGTTCAGGAATGCAGCTTCCATAATGGGGAACTCCGCGTTGCATAAGAAAATGGAGACTGCGTCCAATGCCATTAAGCGTGACATCGTCTTTGCAGCAAGCTTGTATGTCACAGGGATATGATGCATTTAAACATGCATCCTAAATCCTAAATCTAGGCCCGTGATGTTTGTAAGTAGAGAAATTTCATTTCTGGCTGGCAAATTTATGGGCAATCCCAGCCTTTAACACTGTAACAGTCCATGAGCAACTCTGCATTACCAGGCAGATAGGAAATTATATGGACGTGGTAGCATCTCACAGCACTGATACCATGCAAAGAAAGATTGCCCATGCAAGACTTTGTATCAGATCATTCAACTAATCCTGATGCGAGTGCGCACTAGCTAAAA]

[+] EMBL CA765848             [GAGGATCCAAGCAAAACAGTTTACTCTAAAACTGTCCAGATGCTTATAAAAGAGCAACCAGACGGAAACAAGTATCCTGCTGCTTTAGATGCAATAAAAGATCTAAAAATGAAAGACATGCTTCTCGTTGAGAACTACTATGCTTACCAGAGATTACTGCAAAAAATGTCTGAAAATAAGTGCCATGGTTGTATAAAATTAAAGGAGCATATTGCATTGATGAAGGAGCAAAAGGTGTACAAGGATCAGCTGAATGATTTGAAATATGAAATGTCAGATGAGGCACTTCAACAGATGCCGGAGTTTCAAGGCAGAATCGATGTACTAAAAGAAATCCATTACATTGATTCTGATCTAGTGGTGCAACTTAAGGGCCGAGTGGCCTGCGAAATGAATTCCGGCGAGGAGTTGATATCAACCGAATGTCTGTTTGAGAATCAGTTGGATGACCTAGAACCTGAAGAAGCCGTAGCTATTATGTCTGCATTGGTCTTCCAACAAAGGAATACATCAGAACCATCTCTTACCCCGAAACTAGCAGATGCCAGAAAGAGGATTTATGATACAGCAATCAGATTAGGAAAGCTNCAGAGAGAGTTCAAGGTGCCTGTAGATCCCGAGGAATATGCCCCGTGATAATCTCAAGNTTCGGTCTTGNTGAAGTCGTCTACCAAATGGGCAAANGGGACCCCATTTGCAGACATCTGNGAGCTGACAGATGTATCTGAAGGTCTCATTGTAANAACAATCGNGCGGTTGGATGAAACTTGCANGGAGTTCAGGNATGCAGCTTNCAT ATGGGGAACc                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA756411             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TACAGCAATCAGATTAGGAAAGCTCCAGAGAGAGTTCAAGGTGCCTGTAGATCCCGAGGAATATG CCCGTGATAATCTCAAG TTCGGTCTTGTTGAAGTCGTCTA CGAATGGGCAAAGGGGACCCCATTTGCAGACATCTGTGAGCTGACAGATGTATCTGAAGGTCTCATTGTAAGAACAATCGTGCGGTTGGATGAAACTTGCAGGGAGTTCAGGAATGCAGCTTCCATAATGGGGAACTCCGCGTTGCATAAGAAAATGGAGACTGCGTCCAATGCCATTAAGCGTGACATCGTCTTTGCAGCAAGCTTGTATGTCACAGGGATATGATGCATTTAAACATGCATCCTAAATCCTAAATCTAGGCCCGTGATGTTTGTAAGTAGAGAAATTTCATTTCTGGCTGGCAAATTTATGGGCAATCCCAGCCTTTAACACTGTAACAGTCCATGAGCAACTCTGCATTACCAGGCAGATAGGAAATTATATGGACGTGGTAGCATCTCACAGCACTGATACCATGCAAAGAAAGATTGCCCATGCAAGACTTTGTATCAGATCATTCAACTAATCCTGATGCGAGTGCGCACTAGCTAAAA]
[+] EMBL AK062904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGAGTTCAGGAATGCAGCTTCCATAATGGGGAACTCCGCGTTGCATAAGAAAATGGAGACTGCGTCCAATGCCATTAAGCGTGACATCGTCTTTGCAGCAAGCTTGTATGTCACAGGGATATGATGCATTTAAACATGCATCCTAAATCCTAAATCTAGGCCCGTGATGTTTGTAAGTAGAGAAATTTCATTTCTGGCTGGCAAATTTATGGGCAATCCCAGCCTTTAACACTGTAACAGTCCATGAGCAACTCTGCATTACCAGGCAGATAGGAAATTATATGGACGTGGTAGCATCTCACAGCACTGATACCATGCAAAGAAAGATTGCCCATGCAAGACTTTGTATCAGATCATTCAACTAATCCTGATGCGAGTG              ]


>consensus_4095#0 GAGGATCCAAGCAAAACAGTTTACTCTAAAACTGTCCAGATGCTTATAAAAGAGCAACCA GACGGAAACAAGTATCCTGCTGCTTTAGATGCAATAAAAGATCTAAAAATGAAAGACATG CTTCTCGTTGAGAACTACTATGCTTACCAGAGATTACTGCAAAAAATGTCTGAAAATAAG TGCCATGGTTGTATAAAATTAAAGGAGCATATTGCATTGATGAAGGAGCAAAAGGTGTAC AAGGATCAGCTGAATGATTTGAAATATGAAATGTCAGATGAGGCACTTCAACAGATGCCG GAGTTTCAAGGCAGAATCGATGTACTAAAAGAAATCCATTACATTGATTCTGATCTAGTG GTGCAACTTAAGGGCCGAGTGGCCTGCGAAATGAATTCCGGCGAGGAGTTGATATCAACC GAATGTCTGTTTGAGAATCAGTTGGATGACCTAGAACCTGAAGAAGCCGTAGCTATTATG TCTGCATTGGTCTTCCAACAAAGGAATACATCAGAACCATCTCTTACCCCGAAACTAGCA GATGCCAGAAAGAGGATTTATGATACAGCAATCAGATTAGGAAAGCTNCAGAGAGAGTTC AAGGTGCCTGTAGATCCCGAGGAATATGCCCCGTGATAATCTCAAGNTTCGGTCTTGNTG AAGTCGTCTACCAAATGGGCAAANGGGACCCCATTTGCAGACATCTGNGAGCTGACAGAT GTATCTGAAGGTCTCATTGTAANAACAATCGNGCGGTTGGATGAAACTTGCANGGAGTTC AGGAATGCAGCTTCCATAATGGGGAACTCCGCGTTGCATAAGAAAATGGAGACTGCGTCC AATGCCATTAAGCGTGACATCGTCTTTGCAGCAAGCTTGTATGTCACAGGGATATGATGC ATTTAAACATGCATCCTAAATCCTAAATCTAGGCCCGTGATGTTTGTAAGTAGAGAAATT TCATTTCTGGCTGGCAAATTTATGGGCAATCCCAGCCTTTAACACTGTAACAGTCCATGA GCAACTCTGCATTACCAGGCAGATAGGAAATTATATGGACGTGGTAGCATCTCACAGCAC TGATACCATGCAAAGAAAGATTGCCCATGCAAGACTTTGTATCAGATCATTCAACTAATC CTGATGCGAGTGCGCACTAGCTAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)