cluster # 4097

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Oryza sativa
cluster # 4097 cluster # 4097 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4097#0 length = 2652 sequences # 3
consensusID : consensus_4097#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2652
fasta sequence
                              [CCCCAACCCCTCTGAATTTCCCTCCCTTTCCCTCTCCTCCCCTCCTCCTCCTCCCGCCTCCGCCGCCGCCGCCGCCGACTACGCCATGGCCGCCACCGCGACGAAGACCATCGACTTCGCCGCGGAGAGAGCGCTCGCCAAGGACTTCCTCGCCAACTTCGCCGGCCCGCGCGGCGAGCCCAAGTACCTCAACATCCTCCAAGATGTCGCGAACCGGAAGATCCGCGCGGTCCAGATCGAGCTGGACGACCTGTTCCACTACAAGGATGCGGATGACGAGTTCTTGCAGAGGGTCACGGAGAACACGAAGCGCTACATCGGCATATTCGCGGACGCCATCGACGAGCTCATGCCGGAGTCCACCGAGGCGTACGCCGTCGACGAGGACAGGGACATCTTGATGACGCAGCGCGTCGACGAGGGAGCCGATGGCGGCGCAGACGGCACTGACCCCCTGCAGAGGATGCCGCCGGAGATCAGGCGGTTCTTTGAGGTGTACATCAAGGCTTTCTCAAAGGTGACTCCACTCACCATTAGGCAAGTGAAGGCATCCAACATCGGGCAGCTTGTCAAAATATCTGGAATCGTGACTCGCTGCTCGGATGTGAAGCCCTTGATGCAAGTTGCTGTTTATACATGTGAAGAATGTGGTTTTGAGATATACCAGGAAGTGACTGCTAGAGTATTTATGCCTCTCTTTGAATGCCCATCTCAAAGGTGCAAGCTGAACAAAGCCAAAGGGAATCTAATCCTTCAACTGCGAGCATCAAAATTTCTGAAATTTCAAGAGGTGAAACTCCAAGAGTTAGCAGAACATGTACCAAAGGGTCACATCCCACGTTCTCTGACTGTTCATCTTAGAGGAGAGCTGACTAGAAAGGTTGCACCTGGAGATGTGGTTGAGATGTCAGGCATTTTCCTCCCCATGCCTTACTATGGATTCCGAGCCATGCGTGCAGGATTGGTTGCTGATACCTACTTGGAATCAATGTCTATCACCCATTTCAAGAAAAAATATGAAGAATATGAACTTAAAGGTGATGAACAAGAACAAATTGACCGTTTGGCTGAGGATGGTGATATCTACAATAAGTTGGCAAGGTCTTTGGCACCTGAAATATTTGGACATGAAGATGTCAAGAAAGCACTGCTGTTGCTACTTGTTGGCGCACCTCATCGGAAGCTTACAGATGGCATGAAGATAAGAGGAGACTTGCACATATGCCTGATGGGAGATCCTGGTGTTGCAAAGAGTCAACTTCTGAAGCATATCATCAATGTTGCTCCAAGAGGAGTGTATACCACAGGGCGTGGAAGCAGTGGTGTTGGTCTTACTGCTGCCGTCCAGAAAGATCCAGTTACAAATGAGTTTGTTCTTGAGGGAGGAGCACTGGTACTGGCAGATATGGGTATTTGTGCAATAGATGAGTTTGACAAGATGGAAGAGTCAGACAGGACAGCAATCCATGAGGTGATGGAGCAGCAGACTGTTAGTATTGCGAAGGCTGGAATCACCACCTCCCTCAATGCAAGAACGGCAGTTTTGGCTGCTGCAAATCCAGCATGGGGAAGGTATGATATGAGGAGGACCCCAGCTGAAAACATCAATCTACCTCCAGCACTTCTGTCTCGTTTTGACCTCCTTTGGTTGATCCTGGATCGCGCGGACATGGAAACCGATCTTGAAATGGCAAGACATGTTGTTCATGTACATCAAAACCTTGAATCACCAGCTCTGGGGTTCACACCACTTGAACCACCAGTTCTTAGGGCATACATATCTACTGCGAGAAGAGTTGTTCCTTCTGTTCCTCGAGAGCTTGAGGAATACATTGCAACTGCCTATTCGAGCATCCGCCAAGAGGAAGCAAAATCAAATGCACCACACTCCTACACAACTATCAGGACACTTTTGAGCATACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGTGAGAAGCATTG-TGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATACTGAAGTGTATGTATCATGGTGTGTTTAGTTGCTGGCA-TTTATGTTCTCAGACAGCAGCGATTAAAAAAAAC]

[+] EMBL AK073411             [CCCCAACCCCTCTGAATTTCCCTCCCTTTCCCTCTCCTCCCCTCCTCCTCCTCCCGCCTCCGCCGCCGCCGCCGCCGACTACGCCATGGCCGCCACCGCGACGAAGACCATCGACTTCGCCGCGGAGAGAGCGCTCGCCAAGGACTTCCTCGCCAACTTCGCCGGCCCGCGCGGCGAGCCCAAGTACCTCAACATCCTCCAAGATGTCGCGAACCGGAAGATCCGCGCGGTCCAGATCGAGCTGGACGACCTGTTCCACTACAAGGATGCGGATGACGAGTTCTTGCAGAGGGTCACGGAGAACACGAAGCGCTACATCGGCATATTCGCGGACGCCATCGACGAGCTCATGCCGGAGTCCACCGAGGCGTACGCCGTCGACGAGGACAGGGACATCTTGATGACGCAGCGCGTCGACGAGGGAGCCGATGGCGGCGCAGACGGCACTGACCCCCTGCAGAGGATGCCGCCGGAGATCAGGCGGTTCTTTGAGGTGTACATCAAGGCTTTCTCAAAGGTGACTCCACTCACCATTAGGCAAGTGAAGGCATCCAACATCGGGCAGCTTGTCAAAATATCTGGAATCGTGACTCGCTGCTCGGATGTGAAGCCCTTGATGCAAGTTGCTGTTTATACATGTGAAGAATGTGGTTTTGAGATATACCAGGAAGTGACTGCTAGAGTATTTATGCCTCTCTTTGAATGCCCATCTCAAAGGTGCAAGCTGAACAAAGCCAAAGGGAATCTAATCCTTCAACTGCGAGCATCAAAATTTCTGAAATTTCAAGAGGTGAAACTCCAAGAGTTAGCAGAACATGTACCAAAGGGTCACATCCCACGTTCTCTGACTGTTCATCTTAGAGGAGAGCTGACTAGAAAGGTTGCACCTGGAGATGTGGTTGAGATGTCAGGCATTTTCCTCCCCATGCCTTACTATGGATTCCGAGCCATGCGTGCAGGATTGGTTGCTGATACCTACTTGGAATCAATGTCTATCACCCATTTCAAGAAAAAATATGAAGAATATGAACTTAAAGGTGATGAACAAGAACAAATTGACCGTTTGGCTGAGGATGGTGATATCTACAATAAGTTGGCAAGGTCTTTGGCACCTGAAATATTTGGACATGAAGATGTCAAGAAAGCACTGCTGTTGCTACTTGTTGGCGCACCTCATCGGAAGCTTACAGATGGCATGAAGATAAGAGGAGACTTGCACATATGCCTGATGGGAGATCCTGGTGTTGCAAAGAGTCAACTTCTGAAGCATATCATCAATGTTGCTCCAAGAGGAGTGTATACCACAGGGCGTGGAAGCAGTGGTGTTGGTCTTACTGCTGCCGTCCAGAAAGATCCAGTTACAAATGAGTTTGTTCTTGAGGGAGGAGCACTGGTACTGGCAGATATGGGTATTTGTGCAATAGATGAGTTTGACAAGATGGAAGAGTCAGACAGGACAGCAATCCATGAGGTGATGGAGCAGCAGACTGTTAGTATTGCGAAGGCTGGAATCACCACCTCCCTCAATGCAAGAACGGCAGTTTTGGCTGCTGCAAATCCAGCATGGGGAAGGTATGATATGAGGAGGACCCCAGCTGAAAACATCAATCTACCTCCAGCACTTCTGTCTCGTTTTGACCTCCTTTGGTTGATCCTGGATCGCGCGGACATGGAAACCGATCTTGAAATGGCAAGACATGTTGTTCATGTACATCAAAACCTTGAATCACCAGCTCTGGGGTTCACACCACTTGAACCACCAGTTCTTAGGGCATACATATCTACTGCGAGAAGAGTTGTTCCTTCTGTTCCTCGAGAGCTTGAGGAATACATTGCAACTGCCTATTCGAGCATCCGCCAAGAGGAAGCAAAATCAAATGCACCACACTCCTACACAACTATCAGGACACTTTTGAGCATACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGTGAGAAGCATTG TGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATACTGAAGTGTATGTATCATGTTGTGTTTAGTTGCTGGCA TTTATGTTCTCAGACAGCAGCGATTAAAAAAAAC]
[+] EMBL CA766626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ggGGAAGCAAAAT NAATGCACCACACTCCTACACAACTATCNGGACACTTTTGAGCATACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGTCATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGNTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGGGAGAAGCATTGNGGGTTTTTTCAGCCATATTCTTGACTCTTGGTCAACACTTGATACTGNAGGGNATGNATCATGGTGGGGTTAGTTGCTGGCANTTTATGGTCTCAaa                    ]
[-] EMBL CA763157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTNAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGTGAGAAGCATTG TGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATACTGAAGTGTATGTATCAaaaa                                                    ]




>consensus_4097#0
CCCCAACCCCTCTGAATTTCCCTCCCTTTCCCTCTCCTCCCCTCCTCCTCCTCCCGCCTC
CGCCGCCGCCGCCGCCGACTACGCCATGGCCGCCACCGCGACGAAGACCATCGACTTCGC
CGCGGAGAGAGCGCTCGCCAAGGACTTCCTCGCCAACTTCGCCGGCCCGCGCGGCGAGCC
CAAGTACCTCAACATCCTCCAAGATGTCGCGAACCGGAAGATCCGCGCGGTCCAGATCGA
GCTGGACGACCTGTTCCACTACAAGGATGCGGATGACGAGTTCTTGCAGAGGGTCACGGA
GAACACGAAGCGCTACATCGGCATATTCGCGGACGCCATCGACGAGCTCATGCCGGAGTC
CACCGAGGCGTACGCCGTCGACGAGGACAGGGACATCTTGATGACGCAGCGCGTCGACGA
GGGAGCCGATGGCGGCGCAGACGGCACTGACCCCCTGCAGAGGATGCCGCCGGAGATCAG
GCGGTTCTTTGAGGTGTACATCAAGGCTTTCTCAAAGGTGACTCCACTCACCATTAGGCA
AGTGAAGGCATCCAACATCGGGCAGCTTGTCAAAATATCTGGAATCGTGACTCGCTGCTC
GGATGTGAAGCCCTTGATGCAAGTTGCTGTTTATACATGTGAAGAATGTGGTTTTGAGAT
ATACCAGGAAGTGACTGCTAGAGTATTTATGCCTCTCTTTGAATGCCCATCTCAAAGGTG
CAAGCTGAACAAAGCCAAAGGGAATCTAATCCTTCAACTGCGAGCATCAAAATTTCTGAA
ATTTCAAGAGGTGAAACTCCAAGAGTTAGCAGAACATGTACCAAAGGGTCACATCCCACG
TTCTCTGACTGTTCATCTTAGAGGAGAGCTGACTAGAAAGGTTGCACCTGGAGATGTGGT
TGAGATGTCAGGCATTTTCCTCCCCATGCCTTACTATGGATTCCGAGCCATGCGTGCAGG
ATTGGTTGCTGATACCTACTTGGAATCAATGTCTATCACCCATTTCAAGAAAAAATATGA
AGAATATGAACTTAAAGGTGATGAACAAGAACAAATTGACCGTTTGGCTGAGGATGGTGA
TATCTACAATAAGTTGGCAAGGTCTTTGGCACCTGAAATATTTGGACATGAAGATGTCAA
GAAAGCACTGCTGTTGCTACTTGTTGGCGCACCTCATCGGAAGCTTACAGATGGCATGAA
GATAAGAGGAGACTTGCACATATGCCTGATGGGAGATCCTGGTGTTGCAAAGAGTCAACT
TCTGAAGCATATCATCAATGTTGCTCCAAGAGGAGTGTATACCACAGGGCGTGGAAGCAG
TGGTGTTGGTCTTACTGCTGCCGTCCAGAAAGATCCAGTTACAAATGAGTTTGTTCTTGA
GGGAGGAGCACTGGTACTGGCAGATATGGGTATTTGTGCAATAGATGAGTTTGACAAGAT
GGAAGAGTCAGACAGGACAGCAATCCATGAGGTGATGGAGCAGCAGACTGTTAGTATTGC
GAAGGCTGGAATCACCACCTCCCTCAATGCAAGAACGGCAGTTTTGGCTGCTGCAAATCC
AGCATGGGGAAGGTATGATATGAGGAGGACCCCAGCTGAAAACATCAATCTACCTCCAGC
ACTTCTGTCTCGTTTTGACCTCCTTTGGTTGATCCTGGATCGCGCGGACATGGAAACCGA
TCTTGAAATGGCAAGACATGTTGTTCATGTACATCAAAACCTTGAATCACCAGCTCTGGG
GTTCACACCACTTGAACCACCAGTTCTTAGGGCATACATATCTACTGCGAGAAGAGTTGT
TCCTTCTGTTCCTCGAGAGCTTGAGGAATACATTGCAACTGCCTATTCGAGCATCCGCCA
AGAGGAAGCAAAATCAAATGCACCACACTCCTACACAACTATCAGGACACTTTTGAGCAT
ACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGA
TGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCG
CCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGC
AAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGG
TTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCA
GATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATC
GATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATC
TAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTA
ACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCT
GGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCAC
CTTGTGAGAAGCATTGTGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATA
CTGAAGTGTATGTATCATGGTGTGTTTAGTTGCTGGCATTTATGTTCTCAGACAGCAGCG
ATTAAAAAAAAC
clustalw multiple alignements is not computed in this case