These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4097#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2652 fasta sequence [CCCCAACCCCTCTGAATTTCCCTCCCTTTCCCTCTCCTCCCCTCCTCCTCCTCCCGCCTCCGCCGCCGCCGCCGCCGACTACGCCATGGCCGCCACCGCGACGAAGACCATCGACTTCGCCGCGGAGAGAGCGCTCGCCAAGGACTTCCTCGCCAACTTCGCCGGCCCGCGCGGCGAGCCCAAGTACCTCAACATCCTCCAAGATGTCGCGAACCGGAAGATCCGCGCGGTCCAGATCGAGCTGGACGACCTGTTCCACTACAAGGATGCGGATGACGAGTTCTTGCAGAGGGTCACGGAGAACACGAAGCGCTACATCGGCATATTCGCGGACGCCATCGACGAGCTCATGCCGGAGTCCACCGAGGCGTACGCCGTCGACGAGGACAGGGACATCTTGATGACGCAGCGCGTCGACGAGGGAGCCGATGGCGGCGCAGACGGCACTGACCCCCTGCAGAGGATGCCGCCGGAGATCAGGCGGTTCTTTGAGGTGTACATCAAGGCTTTCTCAAAGGTGACTCCACTCACCATTAGGCAAGTGAAGGCATCCAACATCGGGCAGCTTGTCAAAATATCTGGAATCGTGACTCGCTGCTCGGATGTGAAGCCCTTGATGCAAGTTGCTGTTTATACATGTGAAGAATGTGGTTTTGAGATATACCAGGAAGTGACTGCTAGAGTATTTATGCCTCTCTTTGAATGCCCATCTCAAAGGTGCAAGCTGAACAAAGCCAAAGGGAATCTAATCCTTCAACTGCGAGCATCAAAATTTCTGAAATTTCAAGAGGTGAAACTCCAAGAGTTAGCAGAACATGTACCAAAGGGTCACATCCCACGTTCTCTGACTGTTCATCTTAGAGGAGAGCTGACTAGAAAGGTTGCACCTGGAGATGTGGTTGAGATGTCAGGCATTTTCCTCCCCATGCCTTACTATGGATTCCGAGCCATGCGTGCAGGATTGGTTGCTGATACCTACTTGGAATCAATGTCTATCACCCATTTCAAGAAAAAATATGAAGAATATGAACTTAAAGGTGATGAACAAGAACAAATTGACCGTTTGGCTGAGGATGGTGATATCTACAATAAGTTGGCAAGGTCTTTGGCACCTGAAATATTTGGACATGAAGATGTCAAGAAAGCACTGCTGTTGCTACTTGTTGGCGCACCTCATCGGAAGCTTACAGATGGCATGAAGATAAGAGGAGACTTGCACATATGCCTGATGGGAGATCCTGGTGTTGCAAAGAGTCAACTTCTGAAGCATATCATCAATGTTGCTCCAAGAGGAGTGTATACCACAGGGCGTGGAAGCAGTGGTGTTGGTCTTACTGCTGCCGTCCAGAAAGATCCAGTTACAAATGAGTTTGTTCTTGAGGGAGGAGCACTGGTACTGGCAGATATGGGTATTTGTGCAATAGATGAGTTTGACAAGATGGAAGAGTCAGACAGGACAGCAATCCATGAGGTGATGGAGCAGCAGACTGTTAGTATTGCGAAGGCTGGAATCACCACCTCCCTCAATGCAAGAACGGCAGTTTTGGCTGCTGCAAATCCAGCATGGGGAAGGTATGATATGAGGAGGACCCCAGCTGAAAACATCAATCTACCTCCAGCACTTCTGTCTCGTTTTGACCTCCTTTGGTTGATCCTGGATCGCGCGGACATGGAAACCGATCTTGAAATGGCAAGACATGTTGTTCATGTACATCAAAACCTTGAATCACCAGCTCTGGGGTTCACACCACTTGAACCACCAGTTCTTAGGGCATACATATCTACTGCGAGAAGAGTTGTTCCTTCTGTTCCTCGAGAGCTTGAGGAATACATTGCAACTGCCTATTCGAGCATCCGCCAAGAGGAAGCAAAATCAAATGCACCACACTCCTACACAACTATCAGGACACTTTTGAGCATACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGTGAGAAGCATTG-TGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATACTGAAGTGTATGTATCATGGTGTGTTTAGTTGCTGGCA-TTTATGTTCTCAGACAGCAGCGATTAAAAAAAAC] [+] EMBL AK073411 [CCCCAACCCCTCTGAATTTCCCTCCCTTTCCCTCTCCTCCCCTCCTCCTCCTCCCGCCTCCGCCGCCGCCGCCGCCGACTACGCCATGGCCGCCACCGCGACGAAGACCATCGACTTCGCCGCGGAGAGAGCGCTCGCCAAGGACTTCCTCGCCAACTTCGCCGGCCCGCGCGGCGAGCCCAAGTACCTCAACATCCTCCAAGATGTCGCGAACCGGAAGATCCGCGCGGTCCAGATCGAGCTGGACGACCTGTTCCACTACAAGGATGCGGATGACGAGTTCTTGCAGAGGGTCACGGAGAACACGAAGCGCTACATCGGCATATTCGCGGACGCCATCGACGAGCTCATGCCGGAGTCCACCGAGGCGTACGCCGTCGACGAGGACAGGGACATCTTGATGACGCAGCGCGTCGACGAGGGAGCCGATGGCGGCGCAGACGGCACTGACCCCCTGCAGAGGATGCCGCCGGAGATCAGGCGGTTCTTTGAGGTGTACATCAAGGCTTTCTCAAAGGTGACTCCACTCACCATTAGGCAAGTGAAGGCATCCAACATCGGGCAGCTTGTCAAAATATCTGGAATCGTGACTCGCTGCTCGGATGTGAAGCCCTTGATGCAAGTTGCTGTTTATACATGTGAAGAATGTGGTTTTGAGATATACCAGGAAGTGACTGCTAGAGTATTTATGCCTCTCTTTGAATGCCCATCTCAAAGGTGCAAGCTGAACAAAGCCAAAGGGAATCTAATCCTTCAACTGCGAGCATCAAAATTTCTGAAATTTCAAGAGGTGAAACTCCAAGAGTTAGCAGAACATGTACCAAAGGGTCACATCCCACGTTCTCTGACTGTTCATCTTAGAGGAGAGCTGACTAGAAAGGTTGCACCTGGAGATGTGGTTGAGATGTCAGGCATTTTCCTCCCCATGCCTTACTATGGATTCCGAGCCATGCGTGCAGGATTGGTTGCTGATACCTACTTGGAATCAATGTCTATCACCCATTTCAAGAAAAAATATGAAGAATATGAACTTAAAGGTGATGAACAAGAACAAATTGACCGTTTGGCTGAGGATGGTGATATCTACAATAAGTTGGCAAGGTCTTTGGCACCTGAAATATTTGGACATGAAGATGTCAAGAAAGCACTGCTGTTGCTACTTGTTGGCGCACCTCATCGGAAGCTTACAGATGGCATGAAGATAAGAGGAGACTTGCACATATGCCTGATGGGAGATCCTGGTGTTGCAAAGAGTCAACTTCTGAAGCATATCATCAATGTTGCTCCAAGAGGAGTGTATACCACAGGGCGTGGAAGCAGTGGTGTTGGTCTTACTGCTGCCGTCCAGAAAGATCCAGTTACAAATGAGTTTGTTCTTGAGGGAGGAGCACTGGTACTGGCAGATATGGGTATTTGTGCAATAGATGAGTTTGACAAGATGGAAGAGTCAGACAGGACAGCAATCCATGAGGTGATGGAGCAGCAGACTGTTAGTATTGCGAAGGCTGGAATCACCACCTCCCTCAATGCAAGAACGGCAGTTTTGGCTGCTGCAAATCCAGCATGGGGAAGGTATGATATGAGGAGGACCCCAGCTGAAAACATCAATCTACCTCCAGCACTTCTGTCTCGTTTTGACCTCCTTTGGTTGATCCTGGATCGCGCGGACATGGAAACCGATCTTGAAATGGCAAGACATGTTGTTCATGTACATCAAAACCTTGAATCACCAGCTCTGGGGTTCACACCACTTGAACCACCAGTTCTTAGGGCATACATATCTACTGCGAGAAGAGTTGTTCCTTCTGTTCCTCGAGAGCTTGAGGAATACATTGCAACTGCCTATTCGAGCATCCGCCAAGAGGAAGCAAAATCAAATGCACCACACTCCTACACAACTATCAGGACACTTTTGAGCATACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGTGAGAAGCATTG TGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATACTGAAGTGTATGTATCATGTTGTGTTTAGTTGCTGGCA TTTATGTTCTCAGACAGCAGCGATTAAAAAAAAC] [+] EMBL CA766626 [ ggGGAAGCAAAAT NAATGCACCACACTCCTACACAACTATCNGGACACTTTTGAGCATACTCCGGATTTCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGTCATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTCAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGNTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGGGAGAAGCATTGNGGGTTTTTTCAGCCATATTCTTGACTCTTGGTCAACACTTGATACTGNAGGGNATGNATCATGGTGGGGTTAGTTGCTGGCANTTTATGGTCTCAaa ] [-] EMBL CA763157 [ TCTATTGCCTTGGCAAGGCTTAGATTCTCAGAAACCGTCGCTCAGAGCGATGTCGATGAAGCGCTTCGGCTGATGCAGATGTCAAAGTACTCCCTATACTCAGATGACCGCCAGCGGTCTGGATTGGACGCGATTTCTGACATATATTCCATTCTGAGAGATGAAGCTGCAAGAACTAACAGCATGGATGTNAGATATGCTCATGCCCTTAACTTGATCTCCAGAAAGGGTTACAGCGAGGCTCAACTGAAGGAATGCTTGGAGGAGTATGCTTCCCTGAATGTTTGGCAGATCCACCCCAACACCTTTGATATCCATTTCATCGACGCGTAATGCAGGAAGAATTGATCGATCGATCTCCTCTCCTTCAAAGTTCTAACATACCCATGATGAGCTCATGATGGAAAATCTAGAGTTTGAAGCTCCAGGAAGTTGTGACCATGGCTAGGGAAGCCATTGATCAAGGTCTAACAAGGCTGTAAAAGTACTAGGGATCTTAGATAAACTATAATTTTCAATGATGTTATTCTGGGTAGATGTAGCCTGTGAGAAATGTATTAGTAGAGGGAGCCATTGCTATCATTGTCCACCTTGTGAGAAGCATTG TGGTTTTTTCAGCCATATTCTTGACTCTTGTTCAACACTTGATACTGAAGTGTATGTATCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||