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Oryza sativa
cluster # 410 cluster # 410       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_410#0 length = 1544 sequences # 2  

consensusID : consensus_410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1544
fasta sequence
                              [TCCTTTCTTCCCCCCGCCCGATACGCCGCTCCGCCACCGCCGCCGCCGACCACTCTCCTCCGCGTCCGCCTCGTCGCCGGCTAGGGTTCCACGGGTTCTTGCCCGCCCCGCCCGCCGCCCGCCTCGCGGGCTGCGCAGGCAAAATGTCTCGGTATGTTGACCCTAATGACCGTTACGAACCACGTGGTCGTAACAGCAGGTTGTATGTGGGCCATATTTCTCTACGTACAAGGGCAGAGGATCTTGAGAACCTGTTCAGCAGATATGGGAGGGTGCGATTTGTGGATCTGAAGAATGAATATGGCTTTGTTGAGTTTAGTGATCCCCGGGATGCAAATGATGCGAGGCTTGATCTTGATGGCCGAAAGTATGATGGGAGTGACATCATTGTTCAGTTTGCAAGAGGGGTCGAACGTGGTCTTGGAGGTTCTCGTGGATATAAAGCCAGACCCGCACATGGTTCTGACCACTGCTTCAACTGTGGGATGGAGGGGCACTGGCACCGTAACTGCACTGCTGGTGACTGGACAAATAGGTGCTATGGCTGTGGAGAGAGGGGTCATATATTAAGGGAATGCAAGAACAGCCCCAAGGATCTCAAGCAAGAGAGAGGCTACTCAAGGTCCCGTTCACCTCGTCGCAGAAGGAGCCCAAGCTATGGCAAGAGTGGACCCCCTTCTCATTGGGGTAGCCATGGTGCTGATCGTGAGGAAAGGCTTCATTCAAGAAGGGATGGCCGCGGTTACAGCCGCAGCCCTCGGCGCCATGATTCGCCTTCCAATCAGAGAAACCACAGCCCTAGGCGCTATGCTTTACCCTCCAATGAGAGATATGATGGCACTAGGCGCTACGCCTCGCCTTCTTATGGGAGAGACCGCAGTCCCGGGGGCAATGCTTTGCCAGCCAATGGGAGAAGCCACAACCTCACATCAGATGGCATGAACCCTTCACCAAGGGAGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAACGATTACCTGCCCAGTAAGAGAGATGATCAGAATGGGAGCTACAGGAGAGGTGACAGCGATTACCTCTCCAGGGAGAGAGATGATTACCTGTCCAGGGGGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAGCGATTACCTGTCCCGCGACCGTTGATGACAAACAATGCCATGGCCTTGAATCTGCAACAGTCTTTTTGGTGTTGTGACTCTTGGAACAAACTCTCCTCCTGGATGGTGAATATGTTTGACTGTTGAGACATGAGATTTCTTGGCTGGCTAATTTTGACCGCACTCTGTAGTATGTACACTGTAGTACCTTCACCTTGCCTGCACTCCGCAAACCTTTTATGACCTGATATTGGTGTGGGATTAACGAGGATTTTATCAGTTAGTCGCTGTCAGCGAAATCTTCCTTTGTATGCTTGTGCTAAATCTTGGTTGGCTGTAATCATTAATGACGTGTTACATCAAAATGGACAGGTTTTTAAGAATTGAGAAAGTGCGCAATTCATCGGCAGAAACTGCAGCCGTGGAATTG]

[+] EMBL AK063518             [TCCTTTCTTCCCCCCGCCCGATACGCCGCTCCGCCACCGCCGCCGCCGACCACTCTCCTCCGCGTCCGCCTCGTCGCCGGCTAGGGTTCCACGGGTTCTTGCCCGCCCCGCCCGCCGCCCGCCTCGCGGGCTGCGCAGGCAAAATGTCTCGGTATGTTGACCCTAATGACCGTTACGAACCACGTGGTCGTAACAGCAGGTTGTATGTGGGCCATATTTCTCTACGTACAAGGGCAGAGGATCTTGAGAACCTGTTCAGCAGATATGGGAGGGTGCGATTTGTGGATCTGAAGAATGAATATGGCTTTGTTGAGTTTAGTGATCCCCGGGATGCAAATGATGCGAGGCTTGATCTTGATGGCCGAAAGTATGATGGGAGTGACATCATTGTTCAGTTTGCAAGAGGGGTCGAACGTGGTCTTGGAGGTTCTCGTGGATATAAAGCCAGACCCGCACATGGTTCTGACCACTGCTTCAACTGTGGGATGGAGGGGCACTGGCACCGTAACTGCACTGCTGGTGACTGGACAAATAGGTGCTATGGCTGTGGAGAGAGGGGTCATATATTAAGGGAATGCAAGAACAGCCCCAAGGATCTCAAGCAAGAGAGAGGCTACTCAAGGTCCCGTTCACCTCGTCGCAGAAGGAGCCCAAGCTATGGCAAGAGTGGACCCCCTTCTCATTGGGGTAGCCATGGTGCTGATCGTGAGGAAAGGCTTCATTCAAGAAGGGATGGCCGCGGTTACAGCCGCAGCCCTCGGCGCCATGATTCGCCTTCCAATCAGAGAAACCACAGCCCTAGGCGCTATGCTTTACCCTCCAATGAGAGATATGATGGCACTAGGCGCTACGCCTCGCCTTCTTATGGGAGAGACCGCAGTCCCGGGGGCAATGCTTTGCCAGCCAATGGGAGAAGCCACAACCTCACATCAGATGGCATGAACCCTTCACCAAGGGAGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAACGATTACCTGCCCAGTAAGAGAGATGATCAGAATGGGAGCTACAGGAGAGGTGACAGCGATTACCTCTCCAGGGAGAGAGATGATTACCTGTCCAGGGGGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAGCGATTACCTGTCCCGCGACCGTTGATGACAAACAATGCCATGGCCTTGAATCTGCAACAGTCTTTTTGGTGTTGTGACTCTTGGAACAAACTCTCCTCCTGGATGGTGAATATGTTTGACTGTTGAGACATGAGATTTCTTGGCTGGCTAATTTTGACCGCACTCTGTAGTATGTACACTGTAGTACCTTCACCTTGCCTGCACTCCGCAAACCTTTTATGACCTGATATTGGTGTGGGATTAACGAGGATTTTATCAGTTAGTCGCTGTCAGCGAAATCTTCCTTTGTATGCTTGTGCTAAATCTTGGTTGGCTGTAATCATTAATGACGTGTTACATCAAAATGGACAGGTTTTTAAGAATTGAGAAAGTGCGCAATTCATCGGCAGAAACTGCAGCCGTGGAATTG]
[+] EMBL AK121854             [                                     CGCCGCCGCCGACCACTCTCCTCCGCGTCCGCCTCGTCGCCGGCTAGGGTTCCACGGGTTCTTGCCCGCCCCGCCCGCCGCCCGCCTCGCGGGCTGCGCAGGCAAAATGTCTCGGTATGTTGACCCTAATGACCGTTACGAACCACGTGGTCGTAACAGCAGGTTGTATGTGGGCCATATTTCTCTACGTACAAGGGCAGAGGATCTTGAGAACCTGTTCAGCAGATATGGGAGGGTGCGATTTGTGGATCTGAAGAATGAATATGGCTTTGTTGAGTTTAGTGATCCCCGGGATGCAAATGATGCGAGGCTTGATCTTGATGGCCGAAAGTATGATGGGAGTGACATCATTGTTCAGTTTGCAAGAGGGGTCGAACGTGGTCTTGGAGGTTCTCGTGGATATAAAGCCAGACCCGCACATGGTTCTGACCACTGCTTCAACTGTGGGATGGAGGGGCACTGGCACCGTAACTGCACTGCTGGTGACTGGACAAATAGGTGCTATGGCTGTGGAGAGAGGGGTCATATATTAAGGGAATGCAAGAACAGCCCCAAGGATCTCAAGCAAGAGAGAGGCTACTCAAGGTCCCGTTCACCTCGTCGCAGAAGGAGCCCAAGCTATGGCAAGAGTGGACCCCCTTCTCATTGGGGTAGCCATGGTGCTGATCGTGAGGAAAGGCTTCATTCAAGAAGGGATGGCCGCGGTTACAGCCGCAGCCCTCGGCGCCATGATTCGCCTTCCAATCAGAGAAACCACAGCCCTAGGCGCTATGCTTTACCCTCCAATGAGAGATATGATGGCACTAGGCGCTACGCCTCGCCTTCTTATGGGAGAGACCGCAGTCCCGGGGGCAATGCTTTGCCAGCCAATGGGAGAAGCCACAACCTCACATCAGATGGCATGAACCCTTCACCAAGGGAGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAACGATTACCTGCCCAGTAAGAGAGATGATCAGAATGGGAGCTACAGGAGAGGTGACAGCGATTACCTCTCCAGGGAGAGAGATGATTACCTGTCCAGGGGGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAGCGATTACCTGTCCCGCGACCGTTGATGACAAACAATGCCATGGCCTTGAATCTGCAACAGTCTTTTTGGTGTTGTGACTCTTGGAACAAACTCTCCTCCTGGATGGTGAATATGTTTGACTGTTGAGACATGAGATTTCTTGGCTGGCTAATTTTGACCGCACTCTGTAGTATGTACACTGTAGTACCTTCACCTTGCCTGCACTCCGCAAACCTTTTATGACCTGATATTGGTGTGGGATTAACGAGGATTTTATCAGTTAGTCGCTGTCAGCGAAATCTTCCTTTGTATGCTTGTGCTAAATCTTGGTTGGCTGTAATCATTAATGACGTGTTACATCAAAATGG                                                              ]


>consensus_410#0 TCCTTTCTTCCCCCCGCCCGATACGCCGCTCCGCCACCGCCGCCGCCGACCACTCTCCTC CGCGTCCGCCTCGTCGCCGGCTAGGGTTCCACGGGTTCTTGCCCGCCCCGCCCGCCGCCC GCCTCGCGGGCTGCGCAGGCAAAATGTCTCGGTATGTTGACCCTAATGACCGTTACGAAC CACGTGGTCGTAACAGCAGGTTGTATGTGGGCCATATTTCTCTACGTACAAGGGCAGAGG ATCTTGAGAACCTGTTCAGCAGATATGGGAGGGTGCGATTTGTGGATCTGAAGAATGAAT ATGGCTTTGTTGAGTTTAGTGATCCCCGGGATGCAAATGATGCGAGGCTTGATCTTGATG GCCGAAAGTATGATGGGAGTGACATCATTGTTCAGTTTGCAAGAGGGGTCGAACGTGGTC TTGGAGGTTCTCGTGGATATAAAGCCAGACCCGCACATGGTTCTGACCACTGCTTCAACT GTGGGATGGAGGGGCACTGGCACCGTAACTGCACTGCTGGTGACTGGACAAATAGGTGCT ATGGCTGTGGAGAGAGGGGTCATATATTAAGGGAATGCAAGAACAGCCCCAAGGATCTCA AGCAAGAGAGAGGCTACTCAAGGTCCCGTTCACCTCGTCGCAGAAGGAGCCCAAGCTATG GCAAGAGTGGACCCCCTTCTCATTGGGGTAGCCATGGTGCTGATCGTGAGGAAAGGCTTC ATTCAAGAAGGGATGGCCGCGGTTACAGCCGCAGCCCTCGGCGCCATGATTCGCCTTCCA ATCAGAGAAACCACAGCCCTAGGCGCTATGCTTTACCCTCCAATGAGAGATATGATGGCA CTAGGCGCTACGCCTCGCCTTCTTATGGGAGAGACCGCAGTCCCGGGGGCAATGCTTTGC CAGCCAATGGGAGAAGCCACAACCTCACATCAGATGGCATGAACCCTTCACCAAGGGAGA GAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAACGATTACCTGCCCAGTAAGAGAG ATGATCAGAATGGGAGCTACAGGAGAGGTGACAGCGATTACCTCTCCAGGGAGAGAGATG ATTACCTGTCCAGGGGGAGAGATGATCAGAATGGGAGCCACAGGAGAGGTGACAGCGATT ACCTGTCCCGCGACCGTTGATGACAAACAATGCCATGGCCTTGAATCTGCAACAGTCTTT TTGGTGTTGTGACTCTTGGAACAAACTCTCCTCCTGGATGGTGAATATGTTTGACTGTTG AGACATGAGATTTCTTGGCTGGCTAATTTTGACCGCACTCTGTAGTATGTACACTGTAGT ACCTTCACCTTGCCTGCACTCCGCAAACCTTTTATGACCTGATATTGGTGTGGGATTAAC GAGGATTTTATCAGTTAGTCGCTGTCAGCGAAATCTTCCTTTGTATGCTTGTGCTAAATC TTGGTTGGCTGTAATCATTAATGACGTGTTACATCAAAATGGACAGGTTTTTAAGAATTG AGAAAGTGCGCAATTCATCGGCAGAAACTGCAGCCGTGGAATTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)