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Oryza sativa
cluster # 4109 cluster # 4109       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4109#0 length = 2937 sequences # 2  
 consensus_4109#1 length = 699 sequences # 1  
consensusID : consensus_4109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2937
fasta sequence 
                              [CTCCCGCATCGCATCTCCATCATCTCCCCATCCTCCTCTCTACTCGTGTCTTCCATTCCTCCATCCCTCGCGCGCATCTCCGACGAGCTCTCTACTCCCTCCTCCGCCGCCGACGATGATTCACCTCCACTCCCCGCCGACGGCGCCCGCCGCATTCGGCGGCGCCGGCTCGGCGGACTGGCGGCGGCGGCGGCGGTGGTCATGGTCGTCGTCGTCCCGCGCTCCGGTGGCTAAAGGTGGCCATCTTCGTCCGTGCGTTTGGCGGCGCGGCGGCGACGACGGCGGCGGCGAGGATCATCACGCCGACAGCGGCGGCGGCGGCGGAGGAGGAGCGGCGTGGAGGGCGCGGGCCACCACCGCCGGCGTGTCGAGCTCCAGCAGTACAGCCAAAGGGCTGCAAGCCAACATCATCGAACATGAGACCCCCCGGATCACGAAATGGCCCAATGAATCACGCGACCTCGACGATCACCAACAAAACAACGAGGCTGATGAGGAGGCAGATGATGAGCTGCAGCCACTGGTCGAGCAGGTGAGGTCGATGCTGTCGTCCATGGAGGACGGCGCGATCACCGCGTCGGCGTACGACACGGCGTGGGTGGCGCTGGTGCCGCGGCTGGACGGCGAGGGCGGCACGCAGTTCCCGGCCGCCGTGCGGTGGATCGTCGGCAGCCAGCTCGCCGACGGGTCGTGGGGCGACGAGGCGCTCTTCTCCGCCTACGACCGCGTCATCAACACCCTCGCCTGCGTCGTCGCCCTCACCAGATGGTCCCTCCACCATGACCAGTGCAAGCAAGGGCTTCAGTTTCTGAATCTGAACTTGTGGAGGTTAGCAGAGGAGGAGCCGGATACGATGCCGATTGGGTTTGAGATTGCATTCCCTTCTCTTGTGGAGGCAGCTAGGGGTTTGGGTATTGATTTCCCATATGATCACCCTGCTCTCAAGGGCATTTATGCAAACAGAGAACTCAAGCTTAAGAGGATTCCAAAGGACATGATGCATATAGTCCCAACTTCAATTCTGCATAGCCTTGAAGGGATGCCTGGGCTGGATTGGCAGAGGCTTCTGAAGCTCCAATGCAGTGATGGATCCTTCTTGTTCTCCCCTTCAGCTACTGCTTATGCTCTCATGCAGACCGGTGACAAGAAATGCTTCGCGTACATCGACAGGATCATTAAGAAATTCGACGGTGGCGTTCCGAACGTTTACCCGGTCGATCTTTTTGAGCACATATGGGTTGTCGATCGGTTGGAGCGTCTTGGGATATCGCGGTACTTCCAACGAGAGATTGAACAGAACATGGACTATGTCAACAGGCACTGGACTGAAGATGGGATTTGCTGGGCTAGGAACTCCAATGTAAAAGAAGTGGATGACACCGCTATGGCTTTCCGTCTACTACGCCTCCATGGATACAATGTATCACCAAGTGTGTTCAAGAATTTTGAGAAGGATGGGGAGTTCTTCTGTTTTGTGGGGCAATCAACTCAAGCAGTCACTGGGATGTATAACCTGAACAGAGCATCTCAGATAAGTTTTCCAGGAGAAGACATTTTGCAGCGTGCAAGGAATTTCTCATATGAGTTCCTTAGAGAAAGAGAAGCCCAGGGGACACTTCATGATAAATGGATCATCTCCAAGGACCTACCAGGAGAGGTACAATACACACTAGATTTTCCTTGGTATGCGAGCTTGCCACGCGTCGAGGCAAGAACATACATAGGTCAATATGGTGGAAATGATGACGTCTGGATTGGAAAGACACTCTACAGGATGCCAATTGTGAATAACGCTACATATCTCGAGTTGGCGAAACAGGATTTCAACCGTTGTCAAGCTCTACATCAGCATGAGTTGCAGGGTCTACAAAAGTGGTTCATTGAGAATGGCCTGGAAGCTTTTGGGATGACACCTGAAGATGTTTTGAGAGCTTATTTTTTGGCTGCCGCGTGCATTTTCGAACCAAACCGTGCCTCTGAGCGACTTGCATGGGCTAGAGTGTCAGTGCTGGCCAACACTATTTCTAGGCATTTTTACAGCGATATGTCAAGCATGAAAAGGATGGAGCGTTTCATGTGGAGCAGCCTCTATGAAGAAAATGGCAATGTTTTGGGGCTAGAAGGATATGCAAAAGATGGAATCCTTGCGAGGACACTTTGTCAACTTATAGATTTGTTGTCTCAAGAGACACCGCCAGTTCGAGAAGGTCAAAAGTGTATTCATAATCTCATAAGATGTGCTTGGATTGAATGGATGATGCAACAAATCAATATGAAGGATGGCAGATATGACAAAGGCAGAGTTATGCATCCAGGGTCATGCACTGTTCATAATAAAGAAACATGTTTACTTATTGCTCAAATTGTTGAAATTTGTGCTGGACGAATTGAGGAGGCAGCATCTATGATAAATAACACCGAAGGTTCTTGGTTTATTCAACTTGCTTCCTCTATTTGCGATTCTCTTCATGCCAAGATGTTACTTTCACAGGATACCAAGAAAAATGAGACAACAATAAATCAAATTGACAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATCTTCTTCCAAGAGTTGATGATAGAAGAATTAACAACAAAACCAAGCAGACCTTCTTGAGCATTGTGAAAAGCTGTTACTATGCTGCCAATTGCTCACCACATATGCTTGACCAACACATTTCTGAAGTGATTTTTGAGCAAGTTATTTGAAATAAAGTTTAGGCAAATAGAGCATTTGTCAGATTGAATCGCATGTAAATATTTCTGTGCAGAAAAAATATGTAAAGAATGAGAGAGAACAAGCATATAAACAATAGTATTATTGTTGAAAGCTAACAATTTTTACATCAAGTGAATGATGTATCTCTGTATGGTTCTACATGTGGGACACATTTTCTATAAATTATTTATTTTGGATTTGTTCAAAA]

[+] EMBL AK100333             [CTCCCGCATCGCATCTCCATCATCTCCCCATCCTCCTCTCTACTCGTGTCTTCCATTCCTCCATCCCTCGCGCGCATCTCCGACGAGCTCTCTACTCCCTCCTCCGCCGCCGACGATGATTCACCTCCACTCCCCGCCGACGGCGCCCGCCGCATTCGGCGGCGCCGGCTCGGCGGACTGGCGGCGGCGGCGGCGGTGGTCATGGTCGTCGTCGTCCCGCGCTCCGGTGGCTAAAGGTGGCCATCTTCGTCCGTGCGTTTGGCGGCGCGGCGGCGACGACGGCGGCGGCGAGGATCATCACGCCGACAGCGGCGGCGGCGGCGGAGGAGGAGCGGCGTGGAGGGCGCGGGCCACCACCGCCGGCGTGTCGAGCTCCAGCAGTACAGCCAAAGGGCTGCAAGCCAACATCATCGAACATGAGACCCCCCGGATCACGAAATGGCCCAATGAATCACGCGACCTCGACGATCACCAACAAAACAACGAGGCTGATGAGGAGGCAGATGATGAGCTGCAGCCACTGGTCGAGCAGGTGAGGTCGATGCTGTCGTCCATGGAGGACGGCGCGATCACCGCGTCGGCGTACGACACGGCGTGGGTGGCGCTGGTGCCGCGGCTGGACGGCGAGGGCGGCACGCAGTTCCCGGCCGCCGTGCGGTGGATCGTCGGCAGCCAGCTCGCCGACGGGTCGTGGGGCGACGAGGCGCTCTTCTCCGCCTACGACCGCGTCATCAACACCCTCGCCTGCGTCGTCGCCCTCACCAGATGGTCCCTCCACCATGACCAGTGCAAGCAAGGGCTTCAGTTTCTGAATCTGAACTTGTGGAGGTTAGCAGAGGAGGAGCCGGATACGATGCCGATTGGGTTTGAGATTGCATTCCCTTCTCTTGTGGAGGCAGCTAGGGGTTTGGGTATTGATTTCCCATATGATCACCCTGCTCTCAAGGGCATTTATGCAAACAGAGAACTCAAGCTTAAGAGGATTCCAAAGGACATGATGCATATAGTCCCAACTTCAATTCTGCATAGCCTTGAAGGGATGCCTGGGCTGGATTGGCAGAGGCTTCTGAAGCTCCAATGCAGTGATGGATCCTTCTTGTTCTCCCCTTCAGCTACTGCTTATGCTCTCATGCAGACCGGTGACAAGAAATGCTTCGCGTACATCGACAGGATCATTAAGAAATTCGACGGTGGCGTTCCGAACGTTTACCCGGTCGATCTTTTTGAGCACATATGGGTTGTCGATCGGTTGGAGCGTCTTGGGATATCGCGGTACTTCCAACGAGAGATTGAACAGAACATGGACTATGTCAACAGGCACTGGACTGAAGATGGGATTTGCTGGGCTAGGAACTCCAATGTAAAAGAAGTGGATGACACCGCTATGGCTTTCCGTCTACTACGCCTCCATGGATACAATGTATCACCAAGTGTGTTCAAGAATTTTGAGAAGGATGGGGAGTTCTTCTGTTTTGTGGGGCAATCAACTCAAGCAGTCACTGGGATGTATAACCTGAACAGAGCATCTCAGATAAGTTTTCCAGGAGAAGACATTTTGCAGCGTGCAAGGAATTTCTCATATGAGTTCCTTAGAGAAAGAGAAGCCCAGGGGACACTTCATGATAAATGGATCATCTCCAAGGACCTACCAGGAGAGGTACAATACACACTAGATTTTCCTTGGTATGCGAGCTTGCCACGCGTCGAGGCAAGAACATACATAGGTCAATATGGTGGAAATGATGACGTCTGGATTGGAAAGACACTCTACAGGATGCCAATTGTGAATAACGCTACATATCTCGAGTTGGCGAAACAGGATTTCAACCGTTGTCAAGCTCTACATCAGCATGAGTTGCAGGGTCTACAAAAGTGGTTCATTGAGAATGGCCTGGAAGCTTTTGGGATGACACCTGAAGATGTTTTGAGAGCTTATTTTTTGGCTGCCGCGTGCATTTTCGAACCAAACCGTGCCTCTGAGCGACTTGCATGGGCTAGAGTGTCAGTGCTGGCCAACACTATTTCTAGGCATTTTTACAGCGATATGTCAAGCATGAAAAGGATGGAGCGTTTCATGTGGAGCAGCCTCTATGAAGAAAATGGCAATGTTTTGGGGCTAGAAGGATATGCAAAAGATGGAATCCTTGCGAGGACACTTTGTCAACTTATAGATTTGTTGTCTCAAGAGACACCGCCAGTTCGAGAAGGTCAAAAGTGTATTCATAATCTCATAAGATGTGCTTGGATTGAATGGATGATGCAACAAATCAATATGAAGGATGGCAGATATGACAAAGGCAGAGTTATGCATCCAGGGTCATGCACTGTTCATAATAAAGAAACATGTTTACTTATTGCTCAAATTGTTGAAATTTGTGCTGGACGAATTGAGGAGGCAGCATCTATGATAAATAACACCGAAGGTTCTTGGTTTATTCAACTTGCTTCCTCTATTTGCGATTCTCTTCATGCCAAGATGTTACTTTCACAGGATACCAAGAAAAATGAGACAACAATAAATCAAATTGACAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATCTTCTTCCAAGAGTTGATGATAGAAGAATTAACAACAAAACCAAGCAGACCTTCTTGAGCATTGTGAAAAGCTGTTACTATGCTGCCAATTGCTCACCACATATGCTTGACCAACACATTTCTGAAGTGATTTTTGAGCAAGTTATTTGAAATAAAGTTTAGGCAAATAGAGCATTTGTCAGATTGAATCGCATGTAAATATTTCTGTGCAGAAAAAATATGTAAAGAATGAGAGAGAACAAGCATATAAACAATAGTATTATTGTTGAAAGCTAACAATTTTTACATCAAGTGAATGATGTATCTCTGTATGGTTCTACATGTGGGACACATTTTCTATAAATTATTTATTTTG             ]
[+] EMBL BI802403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATACCAAGAAAAATGAGACCAC ATAAATCAAATTCACAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATCTTCTTCCAAGAGTTGATGATAGAAGAATTAACAACAAAACCAAGCAGACCTTCTTGAGCATTGTGAAAAGCTGTTACTATGCTGCCAATTGCTCACCACATATGCTTGACCAACACATTTCTGAAGTGATTTTTGAGCAAGTTATTTGAAATAAAGTTTAGGCAAATAGAGCATTTGTCAGATTGAATCGCATGTGAATATTTCTGTGCAGAAAAAATATGTAAAGAATGAGAGAGAACAAGCATATAAAC ATAGTATTATTGTTGAAAGCTAAC ATTTTTACATCAAGTGAATGATGTATCTCTGTATGGTTCTACATGTGGGACACATTTTCTATAAATTATTTATTTTGGATTTGTTCAAAA]




>consensus_4109#0
CTCCCGCATCGCATCTCCATCATCTCCCCATCCTCCTCTCTACTCGTGTCTTCCATTCCT
CCATCCCTCGCGCGCATCTCCGACGAGCTCTCTACTCCCTCCTCCGCCGCCGACGATGAT
TCACCTCCACTCCCCGCCGACGGCGCCCGCCGCATTCGGCGGCGCCGGCTCGGCGGACTG
GCGGCGGCGGCGGCGGTGGTCATGGTCGTCGTCGTCCCGCGCTCCGGTGGCTAAAGGTGG
CCATCTTCGTCCGTGCGTTTGGCGGCGCGGCGGCGACGACGGCGGCGGCGAGGATCATCA
CGCCGACAGCGGCGGCGGCGGCGGAGGAGGAGCGGCGTGGAGGGCGCGGGCCACCACCGC
CGGCGTGTCGAGCTCCAGCAGTACAGCCAAAGGGCTGCAAGCCAACATCATCGAACATGA
GACCCCCCGGATCACGAAATGGCCCAATGAATCACGCGACCTCGACGATCACCAACAAAA
CAACGAGGCTGATGAGGAGGCAGATGATGAGCTGCAGCCACTGGTCGAGCAGGTGAGGTC
GATGCTGTCGTCCATGGAGGACGGCGCGATCACCGCGTCGGCGTACGACACGGCGTGGGT
GGCGCTGGTGCCGCGGCTGGACGGCGAGGGCGGCACGCAGTTCCCGGCCGCCGTGCGGTG
GATCGTCGGCAGCCAGCTCGCCGACGGGTCGTGGGGCGACGAGGCGCTCTTCTCCGCCTA
CGACCGCGTCATCAACACCCTCGCCTGCGTCGTCGCCCTCACCAGATGGTCCCTCCACCA
TGACCAGTGCAAGCAAGGGCTTCAGTTTCTGAATCTGAACTTGTGGAGGTTAGCAGAGGA
GGAGCCGGATACGATGCCGATTGGGTTTGAGATTGCATTCCCTTCTCTTGTGGAGGCAGC
TAGGGGTTTGGGTATTGATTTCCCATATGATCACCCTGCTCTCAAGGGCATTTATGCAAA
CAGAGAACTCAAGCTTAAGAGGATTCCAAAGGACATGATGCATATAGTCCCAACTTCAAT
TCTGCATAGCCTTGAAGGGATGCCTGGGCTGGATTGGCAGAGGCTTCTGAAGCTCCAATG
CAGTGATGGATCCTTCTTGTTCTCCCCTTCAGCTACTGCTTATGCTCTCATGCAGACCGG
TGACAAGAAATGCTTCGCGTACATCGACAGGATCATTAAGAAATTCGACGGTGGCGTTCC
GAACGTTTACCCGGTCGATCTTTTTGAGCACATATGGGTTGTCGATCGGTTGGAGCGTCT
TGGGATATCGCGGTACTTCCAACGAGAGATTGAACAGAACATGGACTATGTCAACAGGCA
CTGGACTGAAGATGGGATTTGCTGGGCTAGGAACTCCAATGTAAAAGAAGTGGATGACAC
CGCTATGGCTTTCCGTCTACTACGCCTCCATGGATACAATGTATCACCAAGTGTGTTCAA
GAATTTTGAGAAGGATGGGGAGTTCTTCTGTTTTGTGGGGCAATCAACTCAAGCAGTCAC
TGGGATGTATAACCTGAACAGAGCATCTCAGATAAGTTTTCCAGGAGAAGACATTTTGCA
GCGTGCAAGGAATTTCTCATATGAGTTCCTTAGAGAAAGAGAAGCCCAGGGGACACTTCA
TGATAAATGGATCATCTCCAAGGACCTACCAGGAGAGGTACAATACACACTAGATTTTCC
TTGGTATGCGAGCTTGCCACGCGTCGAGGCAAGAACATACATAGGTCAATATGGTGGAAA
TGATGACGTCTGGATTGGAAAGACACTCTACAGGATGCCAATTGTGAATAACGCTACATA
TCTCGAGTTGGCGAAACAGGATTTCAACCGTTGTCAAGCTCTACATCAGCATGAGTTGCA
GGGTCTACAAAAGTGGTTCATTGAGAATGGCCTGGAAGCTTTTGGGATGACACCTGAAGA
TGTTTTGAGAGCTTATTTTTTGGCTGCCGCGTGCATTTTCGAACCAAACCGTGCCTCTGA
GCGACTTGCATGGGCTAGAGTGTCAGTGCTGGCCAACACTATTTCTAGGCATTTTTACAG
CGATATGTCAAGCATGAAAAGGATGGAGCGTTTCATGTGGAGCAGCCTCTATGAAGAAAA
TGGCAATGTTTTGGGGCTAGAAGGATATGCAAAAGATGGAATCCTTGCGAGGACACTTTG
TCAACTTATAGATTTGTTGTCTCAAGAGACACCGCCAGTTCGAGAAGGTCAAAAGTGTAT
TCATAATCTCATAAGATGTGCTTGGATTGAATGGATGATGCAACAAATCAATATGAAGGA
TGGCAGATATGACAAAGGCAGAGTTATGCATCCAGGGTCATGCACTGTTCATAATAAAGA
AACATGTTTACTTATTGCTCAAATTGTTGAAATTTGTGCTGGACGAATTGAGGAGGCAGC
ATCTATGATAAATAACACCGAAGGTTCTTGGTTTATTCAACTTGCTTCCTCTATTTGCGA
TTCTCTTCATGCCAAGATGTTACTTTCACAGGATACCAAGAAAAATGAGACAACAATAAA
TCAAATTGACAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATCTTCTTCCAAG
AGTTGATGATAGAAGAATTAACAACAAAACCAAGCAGACCTTCTTGAGCATTGTGAAAAG
CTGTTACTATGCTGCCAATTGCTCACCACATATGCTTGACCAACACATTTCTGAAGTGAT
TTTTGAGCAAGTTATTTGAAATAAAGTTTAGGCAAATAGAGCATTTGTCAGATTGAATCG
CATGTAAATATTTCTGTGCAGAAAAAATATGTAAAGAATGAGAGAGAACAAGCATATAAA
CAATAGTATTATTGTTGAAAGCTAACAATTTTTACATCAAGTGAATGATGTATCTCTGTA
TGGTTCTACATGTGGGACACATTTTCTATAAATTATTTATTTTGGATTTGTTCAAAA

consensusID : consensus_4109#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 699
fasta sequence 
                              [CATTAATCTCCTAAGATGTGCTTGGCTTGAATGGGTGATGCACCAAATCAATATAAAGGATGGCAGTTATGGCAAAGGATAAGTTATGCTTTCAGGGTCATGCCCTGTTCATAATAAAGAAGCATGTGTACTTTTGCCCAAATTGTTCAAATTTGCGCTGGGCCAATTCAGGAGGCAGCATCTATACCAAATAACGCCGAAGGTTCTTGGTTTATTCACCTTGCTTCCTCTATTTCCGGTTCTGTTCAGGCCAAGATGTTCCTTTCCCAGGATTCCAAGAAAAATGAGGCACCAATAAATCAAATTGCCAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATTTTTTTCCAAGAGTTCTGTTAGAAGACTTTGCACCAAATCCCAGCGGACCTTTTTGAGCATTGTGAAAAGCTGTTACTATGCTGCCAATTGCTCATCCACATATGCTTGACCAACCCATTTTTGAAGTGATTTTTGAGCAAGTTTTTTGAAATAAAGTTTAGGCAAATAGAGCCTTTGTCAGATTGAATCGCATGTAAATATTTCTGTGCAGAAAAATTATGTAAGGATTGAGAGAGACCCAGCATATAAGCAATAGTATTATTGTTGAAGGCTACCAATTTTTTCATCAAGTGAATGATGTATCTCGGTATGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760330             [CATTAATCTCCTAAGATGTGCTTGGCTTGAATGGGTGATGCACCAAATCAATATAAAGGATGGCAGTTATGGCAAAGGATAAGTTATGCTTTCAGGGTCATGCCCTGTTCATAATAAAGAAGCATGTGTACTTTTGCCCAAATTGTTCAAATTTGCGCTGGGCCAATTCAGGAGGCAGCATCTATACCAAATAACGCCGAAGGTTCTTGGTTTATTCACCTTGCTTCCTCTATTTCCGGTTCTGTTCAGGCCAAGATGTTCCTTTCCCAGGATTCCAAGAAAAATGAGGCACCAATAAATCAAATTGCCAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATTTTTTTCCAAGAGTTCTGTTAGAAGACTTTGCACCAAATCCCAGCGGACCTTTTTGAGCATTGTGAAAAGCTGTTACTATGCTGCCAATTGCTCATCCACATATGCTTGACCAACCCATTTTTGAAGTGATTTTTGAGCAAGTTTTTTGAAATAAAGTTTAGGCAAATAGAGCCTTTGTCAGATTGAATCGCATGTAAATATTTCTGTGCAGAAAAATTATGTAAGGATTGAGAGAGACCCAGCATATAAGCAATAGTATTATTGTTGAAGGCTACCAATTTTTTCATCAAGTGAATGATGTATCTCGGTATGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_4109#1
CATTAATCTCCTAAGATGTGCTTGGCTTGAATGGGTGATGCACCAAATCAATATAAAGGA
TGGCAGTTATGGCAAAGGATAAGTTATGCTTTCAGGGTCATGCCCTGTTCATAATAAAGA
AGCATGTGTACTTTTGCCCAAATTGTTCAAATTTGCGCTGGGCCAATTCAGGAGGCAGCA
TCTATACCAAATAACGCCGAAGGTTCTTGGTTTATTCACCTTGCTTCCTCTATTTCCGGT
TCTGTTCAGGCCAAGATGTTCCTTTCCCAGGATTCCAAGAAAAATGAGGCACCAATAAAT
CAAATTGCCAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATTTTTTTCCAAGA
GTTCTGTTAGAAGACTTTGCACCAAATCCCAGCGGACCTTTTTGAGCATTGTGAAAAGCT
GTTACTATGCTGCCAATTGCTCATCCACATATGCTTGACCAACCCATTTTTGAAGTGATT
TTTGAGCAAGTTTTTTGAAATAAAGTTTAGGCAAATAGAGCCTTTGTCAGATTGAATCGC
ATGTAAATATTTCTGTGCAGAAAAATTATGTAAGGATTGAGAGAGACCCAGCATATAAGC
AATAGTATTATTGTTGAAGGCTACCAATTTTTTCATCAAGTGAATGATGTATCTCGGTAT
GGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4109#0      CTCCCGCATCGCATCTCCATCATCTCCCCATCCTCCTCTCTACTCGTGTCTTCCATTCCT 60
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CCATCCCTCGCGCGCATCTCCGACGAGCTCTCTACTCCCTCCTCCGCCGCCGACGATGAT 120
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TCACCTCCACTCCCCGCCGACGGCGCCCGCCGCATTCGGCGGCGCCGGCTCGGCGGACTG 180
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GCGGCGGCGGCGGCGGTGGTCATGGTCGTCGTCGTCCCGCGCTCCGGTGGCTAAAGGTGG 240
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CCATCTTCGTCCGTGCGTTTGGCGGCGCGGCGGCGACGACGGCGGCGGCGAGGATCATCA 300
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CGCCGACAGCGGCGGCGGCGGCGGAGGAGGAGCGGCGTGGAGGGCGCGGGCCACCACCGC 360
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CGGCGTGTCGAGCTCCAGCAGTACAGCCAAAGGGCTGCAAGCCAACATCATCGAACATGA 420
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GACCCCCCGGATCACGAAATGGCCCAATGAATCACGCGACCTCGACGATCACCAACAAAA 480
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CAACGAGGCTGATGAGGAGGCAGATGATGAGCTGCAGCCACTGGTCGAGCAGGTGAGGTC 540
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GATGCTGTCGTCCATGGAGGACGGCGCGATCACCGCGTCGGCGTACGACACGGCGTGGGT 600
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GGCGCTGGTGCCGCGGCTGGACGGCGAGGGCGGCACGCAGTTCCCGGCCGCCGTGCGGTG 660
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GATCGTCGGCAGCCAGCTCGCCGACGGGTCGTGGGGCGACGAGGCGCTCTTCTCCGCCTA 720
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CGACCGCGTCATCAACACCCTCGCCTGCGTCGTCGCCCTCACCAGATGGTCCCTCCACCA 780
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGACCAGTGCAAGCAAGGGCTTCAGTTTCTGAATCTGAACTTGTGGAGGTTAGCAGAGGA 840
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GGAGCCGGATACGATGCCGATTGGGTTTGAGATTGCATTCCCTTCTCTTGTGGAGGCAGC 900
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TAGGGGTTTGGGTATTGATTTCCCATATGATCACCCTGCTCTCAAGGGCATTTATGCAAA 960
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CAGAGAACTCAAGCTTAAGAGGATTCCAAAGGACATGATGCATATAGTCCCAACTTCAAT 1020
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TCTGCATAGCCTTGAAGGGATGCCTGGGCTGGATTGGCAGAGGCTTCTGAAGCTCCAATG 1080
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CAGTGATGGATCCTTCTTGTTCTCCCCTTCAGCTACTGCTTATGCTCTCATGCAGACCGG 1140
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGACAAGAAATGCTTCGCGTACATCGACAGGATCATTAAGAAATTCGACGGTGGCGTTCC 1200
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GAACGTTTACCCGGTCGATCTTTTTGAGCACATATGGGTTGTCGATCGGTTGGAGCGTCT 1260
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGGGATATCGCGGTACTTCCAACGAGAGATTGAACAGAACATGGACTATGTCAACAGGCA 1320
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CTGGACTGAAGATGGGATTTGCTGGGCTAGGAACTCCAATGTAAAAGAAGTGGATGACAC 1380
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CGCTATGGCTTTCCGTCTACTACGCCTCCATGGATACAATGTATCACCAAGTGTGTTCAA 1440
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GAATTTTGAGAAGGATGGGGAGTTCTTCTGTTTTGTGGGGCAATCAACTCAAGCAGTCAC 1500
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGGGATGTATAACCTGAACAGAGCATCTCAGATAAGTTTTCCAGGAGAAGACATTTTGCA 1560
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GCGTGCAAGGAATTTCTCATATGAGTTCCTTAGAGAAAGAGAAGCCCAGGGGACACTTCA 1620
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGATAAATGGATCATCTCCAAGGACCTACCAGGAGAGGTACAATACACACTAGATTTTCC 1680
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TTGGTATGCGAGCTTGCCACGCGTCGAGGCAAGAACATACATAGGTCAATATGGTGGAAA 1740
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGATGACGTCTGGATTGGAAAGACACTCTACAGGATGCCAATTGTGAATAACGCTACATA 1800
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TCTCGAGTTGGCGAAACAGGATTTCAACCGTTGTCAAGCTCTACATCAGCATGAGTTGCA 1860
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GGGTCTACAAAAGTGGTTCATTGAGAATGGCCTGGAAGCTTTTGGGATGACACCTGAAGA 1920
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGTTTTGAGAGCTTATTTTTTGGCTGCCGCGTGCATTTTCGAACCAAACCGTGCCTCTGA 1980
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      GCGACTTGCATGGGCTAGAGTGTCAGTGCTGGCCAACACTATTTCTAGGCATTTTTACAG 2040
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      CGATATGTCAAGCATGAAAAGGATGGAGCGTTTCATGTGGAGCAGCCTCTATGAAGAAAA 2100
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TGGCAATGTTTTGGGGCTAGAAGGATATGCAAAAGATGGAATCCTTGCGAGGACACTTTG 2160
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TCAACTTATAGATTTGTTGTCTCAAGAGACACCGCCAGTTCGAGAAGGTCAAAAGTGTAT 2220
consensus_4109#1      ------------------------------------------------------------
                                                                                  

consensus_4109#0      TCATAATCTCATAAGATGTGCTTGGATTGAATGGATGATGCAACAAATCAATATGAAGGA 2280
consensus_4109#1      CATTAATCTCCTAAGATGTGCTTGGCTTGAATGGGTGATGCACCAAATCAATATAAAGGA 60
                         ******* ************** ******** ******* *********** *****

consensus_4109#0      TGGCAGATATGACAAAGGCAGAGTTATGCATCCAGGGTCATGCACTGTTCATAATAAAGA 2340
consensus_4109#1      TGGCAGTTATGGCAAAGGATAAGTTATGCTTTCAGGGTCATGCCCTGTTCATAATAAAGA 120
                      ****** **** ******   ******** * *********** ****************

consensus_4109#0      AACATGTTTACTTATTGCTCAAATTGTTGAAATTTGTGCTGGACGAATTGAGGAGGCAGC 2400
consensus_4109#1      AGCATGTGTACTT-TTGCCCAAATTGTTCAAATTTGCGCTGGGCCAATTCAGGAGGCAGC 179
                      * ***** ***** **** ********* ******* ***** * **** **********

consensus_4109#0      ATCTATGATAAATAACACCGAAGGTTCTTGGTTTATTCAACTTGCTTCCTCTATTTGCGA 2460
consensus_4109#1      ATCTATACCAAATAACGCCGAAGGTTCTTGGTTTATTCACCTTGCTTCCTCTATTTCCGG 239
                      ******   ******* ********************** **************** ** 

consensus_4109#0      TTCTCTTCATGCCAAGATGTTACTTTCACAGGATACCAAGAAAAATGAGACAACAATAAA 2520
consensus_4109#1      TTCTGTTCAGGCCAAGATGTTCCTTTCCCAGGATTCCAAGAAAAATGAGGCACCAATAAA 299
                      **** **** *********** ***** ****** ************** ** *******

consensus_4109#0      TCAAATTGACAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATCTTCTTCCAAG 2580
consensus_4109#1      TCAAATTGCCAAGGAAATTGAGTTGGGTATGCAAGAACTTGCTCAATATTTTTTTCCAAG 359
                      ******** **************************************** ** *******

consensus_4109#0      AGTTGATGATAGAAGAATTAACAACAAAACCAAGCAGACCTTCTTGAGCATTGTGAAAAG 2640
consensus_4109#1      AGTTC-TGTTAGAAGACTTTGCACCAAATCCCAGCGGACCTTTTTGAGCATTGTGAAAAG 418
                      ****  ** ******* **  ** **** ** *** ****** *****************

consensus_4109#0      CTGTTACTATGCTGCCAATTGCTCA-CCACATATGCTTGACCAACACATTTCTGAAGTGA 2699
consensus_4109#1      CTGTTACTATGCTGCCAATTGCTCATCCACATATGCTTGACCAACCCATTTTTGAAGTGA 478
                      ************************* ******************* ***** ********

consensus_4109#0      TTTTTGAGCAAGTTATTTGAAATAAAGTTTAGGCAAATAGAGCATTTGTCAGATTGAATC 2759
consensus_4109#1      TTTTTGAGCAAGTTTTTTGAAATAAAGTTTAGGCAAATAGAGCCTTTGTCAGATTGAATC 538
                      ************** **************************** ****************

consensus_4109#0      GCATGTAAATATTTCTGTGCAGAAAAAATATGTAAAGAATGAGAGAGAACAAGCATATAA 2819
consensus_4109#1      GCATGTAAATATTTCTGTGCAGAAAAATTATGTAAGGATTGAGAGAGACCCAGCATATAA 598
                      *************************** ******* ** ********* * *********

consensus_4109#0      ACAATAGTATTATTGTTGAAAGCTAACAATTTTTACATCAAGTGAATGATGTATCTCTGT 2879
consensus_4109#1      GCAATAGTATTATTGTTGAAGGCTACCAATTTTTTCATCAAGTGAATGATGTATCTCGGT 658
                       ******************* **** ******** ********************** **

consensus_4109#0      ATGGTTCTACATGTGGGACACATTTTCTATAAATTATTTATTTTGGATTTGTTCAAAA 2937
consensus_4109#1      ATGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------- 699
                      ****** ** *      * * *      * ***  *   *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)