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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4121 cluster # 4121       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4121#0 length = 935 sequences # 3  

consensusID : consensus_4121#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 935
fasta sequence
                              [TTTTTGAAATGCAACAGAACAACTTTATTTTGAATCTTATACACAAGGACAGAGAAGATGCAAATTATTACAATCTACCAATATCCAAGAGTATAAAGCACACATAGAAGTTATGAAATACAATGTTCAATAGATTTACGGTAAACAAACCCCCTACTGATAACCACATTTCACACGTTGCACCAATTTTCGCAGGCGACCATACCTGTGAGGACCTAATTTTTGACCTTATTTTCCGCGAGATTTCCCTCTGGATTGTCCTCGAAACGCCCAATCCTGAAATGCCGGAGCTCTACTCCGGCCTCCGCCGCCGTCCTGGCCTCGCCGTCCAAGGCCATCTCGGCGAGGATCCTCCCGACGGCGGGCCCCATCTTGAAGCCATGGCCGGAGAACCCGGCGCCGACCACGACGTCCTTCCCGAGCTCCCCGCCGACGAAGTCGATGATGAAGTCCTCGTCGGGGGTCATGGAGTACATGCACGGCTGCCGGATGACCGGCCCGCCGGCGGTGTCGACGTGGCCCGGCATGACCTCGTCGATCCACCGCGCCACCGGCTCGACCAGGCCGGCGCCGGCGCCGGCGAGCCAGTCCCGGCGGTCCGGGTCGCACGGCGGGCCGCCGTGGGCGGCCACCTTGATCAGCCCCGGGAACTCCATCGACGGCGTGCTGTAGATGTACGGGTCGCCGTAGCTGGCGAACGTCGGGAAGCCGGACTCCGGCGTGAGCTCGTGCTCGCGGCCGGGCCTCGCCCGCCAGTAGCAGATGAGCGTGTGCAGCGGCTGCACCGGCAGGTCGACGCCGGCGACCGACCTCACCAGCTTGCTGGCCCAGGCGCCCACCGTGATGATGCACTTGGCGCCATGGAACTCCTCGCCGCTCGATGTCTTCACCACGATCGATCCGTCTCCTGATCAAATTAAGTGTTTGATATGCTA]

[-] EMBL AU172430             [TTTTTGAAATGCAACAGAACAACTTTATTTTGAATCTTATACACAAGGACAGAGAAGATGCAAATTATTACAATCTACCAATATCCAAGAGTATAAAGCACACATAGAAGTTATGAAATACAATGTTCAATAGATTTACGGTAAACAAACCCCCTACTGATAACCACATTTCACACGTTGCACCAATTTTCGCAGGCGACCATACCTGTGAGGACCTAATTTTTGACCTTATTTTCCGCGAGATTTCCCTCTGGATTGTCCTCGAAACGCCCAATCCTGAAATGCCGGAGCTCTACTCCGGCCTCCGCCGCCGTCCTGGCCTCGCCGTCCAAGGCCATCTCGGCGAGGATCCTCCCGACGGCGGGCCCCATCTTGAAGCCATGGCCGGAGAACCCGGCGCCGACCACGACGTCCTTCCCGAGCTCCCCGCCGACGAAGTCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AK121017             [                    AACTTTATTTTGAATCTTATACACAAGGACAGAGAAGATGCAAATTATTACAATCTACCAATATCCAAGAGTATAAAGCACACATAGAAGTTATGAAATACAATGTTCAATAGATTTACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BP184744             [                                                                                                                                                                                                                                                                                                       CTCCGGCCTCCGCCGCCGTCCTGGCCTCGCCGTCCAAGGCCATCTCGGCGAGGATCCTCCCGACGGCGGGCCCCATCTTGAAGCCATGGCCGGAGAACCCGGCGCCGACCACGACGTCCTTCCCGAGCTCCCCGCCGACGAAGTCGATGATGAAGTCCTCGTCGGGGGTCATGGAGTACATGCACGGCTGCCGGATGACCGGCCCGCCGGCGGTGTCGACGTGGCCCGGCATGACCTCGTCGATCCACCGCGCCACCGGCTCGACCAGGCCGGCGCCGGCGCCGGCGAGCCAGTCCCGGCGGTCCGGGTCGCACGGCGGGCCGCCGTGGGCGGCCACCTTGATCAGCCCCGGGAACTCCATCGACGGCGTGCTGTAGATGTACGGGTCGCCGTAGCTGGCGAACGTCGGGAAGCCGGACTCCGGCGTGAGCTCGTGCTCGCGGCCGGGCCTCGCCCGCCAGTAGCAGATGAGCGTGTGCAGCGGCTGCACCGGCAGGTCGACGCCGGCGACCGACCTCACCAGCTTGCTGGCCCAGGCGCCCACCGTGATGATGCACTTGGCGCCATGGAACTCCTCGCCGCTCGATGTCTTCACCACGATCGATCCGTCTCCTGATCAAATTAAGTGTTTGATATGCTA]


>consensus_4121#0 TTTTTGAAATGCAACAGAACAACTTTATTTTGAATCTTATACACAAGGACAGAGAAGATG CAAATTATTACAATCTACCAATATCCAAGAGTATAAAGCACACATAGAAGTTATGAAATA CAATGTTCAATAGATTTACGGTAAACAAACCCCCTACTGATAACCACATTTCACACGTTG CACCAATTTTCGCAGGCGACCATACCTGTGAGGACCTAATTTTTGACCTTATTTTCCGCG AGATTTCCCTCTGGATTGTCCTCGAAACGCCCAATCCTGAAATGCCGGAGCTCTACTCCG GCCTCCGCCGCCGTCCTGGCCTCGCCGTCCAAGGCCATCTCGGCGAGGATCCTCCCGACG GCGGGCCCCATCTTGAAGCCATGGCCGGAGAACCCGGCGCCGACCACGACGTCCTTCCCG AGCTCCCCGCCGACGAAGTCGATGATGAAGTCCTCGTCGGGGGTCATGGAGTACATGCAC GGCTGCCGGATGACCGGCCCGCCGGCGGTGTCGACGTGGCCCGGCATGACCTCGTCGATC CACCGCGCCACCGGCTCGACCAGGCCGGCGCCGGCGCCGGCGAGCCAGTCCCGGCGGTCC GGGTCGCACGGCGGGCCGCCGTGGGCGGCCACCTTGATCAGCCCCGGGAACTCCATCGAC GGCGTGCTGTAGATGTACGGGTCGCCGTAGCTGGCGAACGTCGGGAAGCCGGACTCCGGC GTGAGCTCGTGCTCGCGGCCGGGCCTCGCCCGCCAGTAGCAGATGAGCGTGTGCAGCGGC TGCACCGGCAGGTCGACGCCGGCGACCGACCTCACCAGCTTGCTGGCCCAGGCGCCCACC GTGATGATGCACTTGGCGCCATGGAACTCCTCGCCGCTCGATGTCTTCACCACGATCGAT CCGTCTCCTGATCAAATTAAGTGTTTGATATGCTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)