cluster # 4125

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Oryza sativa
cluster # 4125 cluster # 4125 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4125#0 length = 1783 sequences # 3
consensusID : consensus_4125#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1783
fasta sequence
                              [CTCGTCCTCTCAGCCAGAGGCATCATCTTGATATCTCTCCCCATCCTCTCACGACTCCCGACACCAAGAAAGCAAGTATACCATGGATTGAACATATACACGGCCGTCACACATCTGTCTCCTTCCCTCGTCTCCTCACCAATGATTCGGTCCAGAAACTTGCAGAGATCCTCTGCTAGTACTTGCACAGAGCCTCAGACCGAGCACTGAGGAAGCTTAACATCTGCCTATCTTCTTTCTAGTTCTTCCCTTTCTCTCTGTTGTTGCAGTCTTGCAGCTGCCCGATTTCGTGTTCTACGAGGCAATGGCATCCTCTGCTCCTGCTTGGGTCCCCTACGAGCCAACGAGAGATTGCTCTCAAGGGCTGTGCAGCATGTACTGCCCCCAGTGGTGCTACTTCATCTTCCCTCCGCCGCCGCCCTTCGACGTCGCCGGCACCAGCGCCGACGACTCCTCCGGCCCTGTCTTCTCCCCTCTCGTCATTGCAATCATCGGCGTTCTGGCCAGCGCCTTCCTCCTCGTCAGCTATTACACCTTCATCTCCAAGTACTGTGGCACCGTTAGCTCCCTCAGGGGGAGGGTCTTCGGCTCGAGCTCCGGTGGCGCTGCTTATGGCGGCGGTGCCGGTAGCGGCGGCCGCCACGGCCACGGGCAGTCGAGGAGCCACGAGTCATGGAACGTCTCGCCGCCGAGCGGGCTGGACGAGACCCTGATCAACAAGATCACGGTGTGCAAGTACCGGCGCGGTGATGGGTTCGTCCACACCACCGACTGCTCGGTCTGCCTCGGCGAGTTCAGTGACGGGGAGAGCCTCCGGCTGCTACCCAGGTGCAGCCATGCCTTCCACCAGCAATGCATCGACACTTGGCTCAAGTCACACTCCAATTGCCCCCTCTGCCGCGCCAACATCACCTTCGTCACCGTCGGGTTGGCGTCGCCGGAGCCGGAGGGCTGTGCTCCAGGCGAGACTGGAGGTGACAATACACACGAGGTGGTTGTGGTGATGGATGGCTTGGAAAATCTTTGTGAAGAGCAGCAGGAGGCAGTGAGCAGGGCCAGCACTGCCGATGATGATCACGATGCGAAGGACGTCGCAGAGGGGATGGAGGAGGCCAATGGCGCAGCCGAGATCAGAGAAGAAGGCTCGCCGCCAAAGAGGGGCGCGCCGTCGTTTGATCTTCACCGTGACAACCGCATGTGCATCGCCGACGTTCTGCAGGAATCCATGGAAGACGAGCTGACGGCAGCCAGGGAGAGTGGCCTCCTCGCAGGCGGCGCTGGCACGTCAAGACGGTGCCATGGCGAGAACAGCAAGGGAAGGGGAGGCCGCAGCCGACGTGCATTGCAGCTGCAGGACGCCATGGAGGCTCTGCCGGGGAAGAGATTGCCCTCCGGTGGGAGATCCTGCTTCAGCAGCAAGAGCGGCAGGGGAAAAGATTCAGATCATCCAATGTGAGGCGGTCAGTTCTCATTTTCTTACTCTAGGATACTGGACAAGCAACCTTTGTTTGCATGATGAGATGCGAATGGGAAAAAATTGCAAGGACAATCATCATAATCTGGAGATGTCGTCTTGTGATAATGTTGATCTGCTGCCTCACTCCATGTGATGCCACTGCCAAATCGATCCTCTGCAGTGCTTGGTTGGTAATGTCTCTTTTGTTCATAGTTGAGAAGGACCTGAGAGCTGATCTCTCTCTCTCTCTCTTTTGCTCTGCCATTTTATACATTACATTGACTTCCCACCGTTCAATTTTTCTGTGGAGTTTGTTCTTCTGTGAGT]

[+] EMBL AK066752             [CTCGTCCTCTCAGCCAGAGGCATCATCTTGATATCTCTCCCCATCCTCTCACGACTCCCGACACCAAGAAAGCAAGTATACCATGGATTGAACATATACACGGCCGTCACACATCTGTCTCCTTCCCTCGTCTCCTCACCAATGATTCGGTCCAGAAACTTGCAGAGATCCTCTGCTAGTACTTGCACAGAGCCTCAGACCGAGCACTGAGGAAGCTTAACATCTGCCTATCTTCTTTCTAGTTCTTCCCTTTCTCTCTGTTGTTGCAGTCTTGCAGCTGCCCGATTTCGTGTTCTACGAGGCAATGGCATCCTCTGCTCCTGCTTGGGTCCCCTACGAGCCAACGAGAGATTGCTCTCAAGGGCTGTGCAGCATGTACTGCCCCCAGTGGTGCTACTTCATCTTCCCTCCGCCGCCGCCCTTCGACGTCGCCGGCACCAGCGCCGACGACTCCTCCGGCCCTGTCTTCTCCCCTCTCGTCATTGCAATCATCGGCGTTCTGGCCAGCGCCTTCCTCCTCGTCAGCTATTACACCTTCATCTCCAAGTACTGTGGCACCGTTAGCTCCCTCAGGGGGAGGGTCTTCGGCTCGAGCTCCGGTGGCGCTGCTTATGGCGGCGGTGCCGGTAGCGGCGGCCGCCACGGCCACGGGCAGTCGAGGAGCCACGAGTCATGGAACGTCTCGCCGCCGAGCGGGCTGGACGAGACCCTGATCAACAAGATCACGGTGTGCAAGTACCGGCGCGGTGATGGGTTCGTCCACACCACCGACTGCTCGGTCTGCCTCGGCGAGTTCAGTGACGGGGAGAGCCTCCGGCTGCTACCCAGGTGCAGCCATGCCTTCCACCAGCAATGCATCGACACTTGGCTCAAGTCACACTCCAATTGCCCCCTCTGCCGCGCCAACATCACCTTCGTCACCGTCGGGTTGGCGTCGCCGGAGCCGGAGGGCTGTGCTCCAGGCGAGACTGGAGGTGACAATACACACGAGGTGGTTGTGGTGATGGATGGCTTGGAAAATCTTTGTGAAGAGCAGCAGGAGGCAGTGAGCAGGGCCAGCACTGCCGATGATGATCACGATGCGAAGGACGTCGCAGAGGGGATGGAGGAGGCCAATGGCGCAGCCGAGATCAGAGAAGAAGGCTCGCCGCCAAAGAGGGGCGCGCCGTCGTTTGATCTTCACCGTGACAACCGCATGTGCATCGCCGACGTTCTGCAGGAATCCATGGAAGACGAGCTGACGGCAGCCAGGGAGAGTGGCCTCCTCGCAGGCGGCGCTGGCACGTCAAGACGGTGCCATGGCGAGAACAGCAAGGGAAGGGGAGGCCGCAGCCGACGTGCATTGCAGCTGCAGGACGCCATGGAGGCTCTGCCGGGGAAGAGATTGCCCTCCGGTGGGAGATCCTGCTTCAGCAGCAAGAGCGGCAGGGGAAAAGATTCAGATCATCCAATGTGAGGCGGTCAGTTCTCATTTTCTTACTCTAGGATACTGGACAAGCAACCTTTGTTTGCATGATGAGATGCGAATGGGAAAAAATTGCAAGGACAATCATCATAATCTGGAGATGTCGTCTTGTGATAATGTTGATCTGCTGCCTCACTCCATGTGATGCCACTGCCAAATCGATCCTCTGCAGTGCTTGGTTGGTAATGTCTCTTTTGTTCATAGTTGAGAAGGACCTGAGAGCTGATCTCTCTCTCTCTCTCTTTTGCTCTGCCATTTTATACATTACATTGACTTCCCACCGTTCAATTTTTCTGTGGAGTTTGTTCTTCTGTGAGT]
[+] EMBL CB677898             [                                                                         AAGTATACCATGGATTGAACATATACACGGCCGTCACACATCTGTCTCCTTCCCTCGTCTCCTCACCAATGATTCGGTCCAGAAACTTGCAGAGATCCTCTGCTAGTACTTGCACAGAGCCTCAGACCGAGCACTGAGGAAGCTTAACATCTGCCTATCTTCTTTCTAGTTCTTCCCTTTCTCTCTGTTGTTGCAGTCTTGCAGCTGCCCGATTTCGTGTTCTACGAGGCAATGGCATCCTCTGCTCCTGCTTGGGTCCCCTACGAGCCAACGAGAGATTGCTCTCAAGGGCTGTGCAGCATGTACTGCCCCCAGTGGTGCTACTTCATCTTCCCTCCGCCGCCGCCCTTCGACGTCGCCGGCACCAGCGCCGACGACTCCTCCGGCCCTGTCTTCTCCCCTCTCGTCATTGCAATCATCGGCGTTCTGGCCAGCGCCTTCCTCCTCGTCAGCTATTACACCTTCATCTCCAAGTACTGTGGCACCGTTAGCTCCCTCAGGGGGAGGGTCTTCGGCTCGAGCTCCGGTGGCGCTGCTTATGGCGGCGGTGCCGGTAGCGGCGGCCGCCACGGCCACGGGCAGTCGAGGAGCCACGAGTCATGGAACGTCTCGCCGCCGAGCGGGCTGGACGAGACCCTGATCAACAAGATCACGGTGTGCAAGTACCGGCGCGGTGATGGGTTCGTCCACACCACCGACTGCTCGGTCTGCCTCGGCGAGTTCAGTGACGGGGAGAGCCTCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB677899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTGATGGATGGCTTGGAAAATCTTTGTGAAGAGCAGCAGGAGGCAGTGAGCAGGGCCAGCACTGCCGATGATGATCACGATGCGAAGGACGTCGCAGAGGGGATGGAGGAGGCCAATGGCGCAGCCGAGATCAGAGAAGAAGGCTCGCCGCCAAAGAGGGGCGCGTCGTCGTTTGATCTTCACCGTGACAACCGCATGTGCATCGCCGACGTTCTGCAGGAATCCATGGAAGACGAGCTGACGGCAGCCAGGGAGAGTGGCCTCCTCGCAGGCGGCGCTGGCACGTCAAGACGGTGCCATGGCGAGAACAGCAAGGGAAGGGGAGGCCGCAGCCGACGTGCATTGCAGCTGCAGGACGCCATGGAGGCTCTGCCGGGGAAGAGATTGCCCTCCGGTGGGAGATCCTGCTTCAGCAGCAAGAGCGGCAGGGGAAAAGATTCAGATCATCCAATGTGAGGCGGTCAGTTCTCATTTTCTTACTCTAGGATACTGGACAAGCAACCTTTGTTTGCATGATGAGATGCGAATGGGAAAAAATTGCAAGGACAATCATCATAATCTGGAGATGTCGTCTTGTGATAATGTTGATCTGCTGCCTCACTCCATGTGATGCCACTGCCAAATCGATCCTCTGCAGTGCTTGGTTGGTAATGTCTCTTTTGTTCATAGTTGAGAAGGACCTGAGAGCTGATCTCTCTCTCTCTCTCTTTTGCTCTGCCATTTTATACATTACATTGACTTCCCACCGTTCAATTTTTCTGTGGAGT                ]




>consensus_4125#0
CTCGTCCTCTCAGCCAGAGGCATCATCTTGATATCTCTCCCCATCCTCTCACGACTCCCG
ACACCAAGAAAGCAAGTATACCATGGATTGAACATATACACGGCCGTCACACATCTGTCT
CCTTCCCTCGTCTCCTCACCAATGATTCGGTCCAGAAACTTGCAGAGATCCTCTGCTAGT
ACTTGCACAGAGCCTCAGACCGAGCACTGAGGAAGCTTAACATCTGCCTATCTTCTTTCT
AGTTCTTCCCTTTCTCTCTGTTGTTGCAGTCTTGCAGCTGCCCGATTTCGTGTTCTACGA
GGCAATGGCATCCTCTGCTCCTGCTTGGGTCCCCTACGAGCCAACGAGAGATTGCTCTCA
AGGGCTGTGCAGCATGTACTGCCCCCAGTGGTGCTACTTCATCTTCCCTCCGCCGCCGCC
CTTCGACGTCGCCGGCACCAGCGCCGACGACTCCTCCGGCCCTGTCTTCTCCCCTCTCGT
CATTGCAATCATCGGCGTTCTGGCCAGCGCCTTCCTCCTCGTCAGCTATTACACCTTCAT
CTCCAAGTACTGTGGCACCGTTAGCTCCCTCAGGGGGAGGGTCTTCGGCTCGAGCTCCGG
TGGCGCTGCTTATGGCGGCGGTGCCGGTAGCGGCGGCCGCCACGGCCACGGGCAGTCGAG
GAGCCACGAGTCATGGAACGTCTCGCCGCCGAGCGGGCTGGACGAGACCCTGATCAACAA
GATCACGGTGTGCAAGTACCGGCGCGGTGATGGGTTCGTCCACACCACCGACTGCTCGGT
CTGCCTCGGCGAGTTCAGTGACGGGGAGAGCCTCCGGCTGCTACCCAGGTGCAGCCATGC
CTTCCACCAGCAATGCATCGACACTTGGCTCAAGTCACACTCCAATTGCCCCCTCTGCCG
CGCCAACATCACCTTCGTCACCGTCGGGTTGGCGTCGCCGGAGCCGGAGGGCTGTGCTCC
AGGCGAGACTGGAGGTGACAATACACACGAGGTGGTTGTGGTGATGGATGGCTTGGAAAA
TCTTTGTGAAGAGCAGCAGGAGGCAGTGAGCAGGGCCAGCACTGCCGATGATGATCACGA
TGCGAAGGACGTCGCAGAGGGGATGGAGGAGGCCAATGGCGCAGCCGAGATCAGAGAAGA
AGGCTCGCCGCCAAAGAGGGGCGCGCCGTCGTTTGATCTTCACCGTGACAACCGCATGTG
CATCGCCGACGTTCTGCAGGAATCCATGGAAGACGAGCTGACGGCAGCCAGGGAGAGTGG
CCTCCTCGCAGGCGGCGCTGGCACGTCAAGACGGTGCCATGGCGAGAACAGCAAGGGAAG
GGGAGGCCGCAGCCGACGTGCATTGCAGCTGCAGGACGCCATGGAGGCTCTGCCGGGGAA
GAGATTGCCCTCCGGTGGGAGATCCTGCTTCAGCAGCAAGAGCGGCAGGGGAAAAGATTC
AGATCATCCAATGTGAGGCGGTCAGTTCTCATTTTCTTACTCTAGGATACTGGACAAGCA
ACCTTTGTTTGCATGATGAGATGCGAATGGGAAAAAATTGCAAGGACAATCATCATAATC
TGGAGATGTCGTCTTGTGATAATGTTGATCTGCTGCCTCACTCCATGTGATGCCACTGCC
AAATCGATCCTCTGCAGTGCTTGGTTGGTAATGTCTCTTTTGTTCATAGTTGAGAAGGAC
CTGAGAGCTGATCTCTCTCTCTCTCTCTTTTGCTCTGCCATTTTATACATTACATTGACT
TCCCACCGTTCAATTTTTCTGTGGAGTTTGTTCTTCTGTGAGT
clustalw multiple alignements is not computed in this case