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Oryza sativa
cluster # 4131 cluster # 4131       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4131#0 length = 3017 sequences # 2  
consensus_4131#1 length = 850 sequences # 1  

consensusID : consensus_4131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3017
fasta sequence
                              [AGGCGAGGAGAGGAGGCGACGGCCGCGAGCGCGAGGCGAGGCTTCCGACTCGAGCAAGGAGATCCCACTGCTCCAACCAGATCAGGTGATGGGTGGGGAATCTACAGGAAACACGACCTCCATTCCCCAATGGGAGAAGCCACTGTTCCCCTCAGTATCCATGTTACTCTGAGCTACTGAGCTCTCTGCTAAGTTGGTGCCTCAGCTGTGTATCTTGCAGCAAGAGTGTTCTAGCCTTCTAGGCTGCCAAGATGAAGTCCAATGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGAAGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGATTGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGTCTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGGTGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGGTGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTGAGGGACGCCTGTGTTGATACCTGTGGTACCCTCGCATTGTGTGCTAGAGGCTATGGGGATGGTGGCGCTGCATTGGTTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTGGGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTCTGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTCAAGAATCCCCATTTCATGGCAAAGCCTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACAGAGCAGTCTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAAGGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCTCCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAAACCAGTGCGTGATGCAATTACCCAAGCCATTCAGTTGTGGAAGGTTATTCCAGGGTCTGATACTCCCGAGCCATCAGAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCATCATGATGGTAGAAGTATAAATGATGGTGGATCACGAGACACTTCTTTCAGGAGAGTTGATCCTGCATCTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGTCTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATTGGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAAAGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAGACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGTCAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTGAGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCATAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGGGTGCAATGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATATCTTTGATATGTTGCAGGAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCATGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTATACAATTACTCAAAGTGAAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCACCGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAATTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACATGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTGGGGTTGTGAGATCGGAAAGTGCTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAGCATCAGGGGTTAAGGGAAACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGCTGCAAAATGCATTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGCGTCTGCATATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAGAACTGGACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTGGCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCATTGCCTTGGCTTCAACAGGTAGCGGATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGTTGT---AGCCCTGTAATCTGTGTGACAATGTATACTCGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAGTTAAGCTTGGATCTTCTGTTGCTAGGAAACGGCTGTTTTTAGCTGTGTTGTGAG-ATTTGGTCTCATAAGTAGTGATCATTGAGC]

[+] EMBL AK073825             [AGGCGAGGAGAGGAGGCGACGGCCGCGAGCGCGAGGCGAGGCTTCCGACTCGAGCAAGGAGATCCCACTGCTCCAACCAGATCAGGTGATGGGTGGGGAATCTACAGGAAACACGACCTCCATTCCCCAATGGGAGAAGCCACTGTTCCCCTCAGTATCCATGTTACTCTGAGCTACTGAGCTCTCTGCTAAGTTGGTGCCTCAGCTGTGTATCTTGCAGCAAGAGTGTTCTAGCCTTCTAGGCTGCCAAGATGAAGTCCAATGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGAAGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGATTGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGTCTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGGTGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGGTGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTGAGGGACGCCTGTGTTGATACCTGTGGTACCCTCGCATTGTGTGCTAGAGGCTATGGGGATGGTGGCGCTGCATTGGTTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTGGGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTCTGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTCAAGAATCCCCATTTCATGGCAAAGCCTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACAGAGCAGTCTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAAGGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCTCCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAAACCAGTGCGTGATGCAATTACCCAAGCCATTCAGTTGTGGAAGGTTATTCCAGGGTCTGATACTCCCGAGCCATCAGAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCATCATGATGGTAGAAGTATAAATGATGGTGGATCACGAGACACTTCTTTCAGGAGAGTTGATCCTGCATCTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGTCTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATTGGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAAAGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAGACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGTCAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTGAGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCATAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGGGTGCAATGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATATCTTTGATATGTTGCAGGAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCATGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTATACAATTACTCAAAGTGAAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCACCGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAATTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACATGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTGGGGTTGTGAGATCGGAAAGTGCTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAGCATCAGGGGTTAAGGGAAACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGCTGCAAAATGCATTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGCGTCTGCATATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAGAACTGGACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTGGCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCATTGCCTTGGCTTCAACAGGTAGCGGATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGTTGT   AGCCCTGTAATCTGTGTGACAATGTATACTCGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAGTTAAGCTTGGATCTTCTGTTGCTAGGAAACGGCTGTTTTTAGCTGTGTTGTGAG ATTTGGTCTCATAAGTAGTGATCATTGAGC]
[+] EMBL CA765425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            acACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGCTGCAAAATGCATTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGAGTCTGCATATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGGTAGAACTGGACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTGGCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCACTGCCTTGGCTTCAACAGGTAGCGGATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAAAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCTGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTTTGTGAGGCTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGNTGTAGCAGCCCTGTAATCTGTGTGACAATGTATACTCGGNTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTACGCTAGNTAAGCTTGGATCNTCTGNTGCTAGGAAACGGCTG NTTTAGCAGNGGTGNGAGAATTTGGTCTCATAAGTAGNGATCATTGAG ]


>consensus_4131#0 AGGCGAGGAGAGGAGGCGACGGCCGCGAGCGCGAGGCGAGGCTTCCGACTCGAGCAAGGA GATCCCACTGCTCCAACCAGATCAGGTGATGGGTGGGGAATCTACAGGAAACACGACCTC CATTCCCCAATGGGAGAAGCCACTGTTCCCCTCAGTATCCATGTTACTCTGAGCTACTGA GCTCTCTGCTAAGTTGGTGCCTCAGCTGTGTATCTTGCAGCAAGAGTGTTCTAGCCTTCT AGGCTGCCAAGATGAAGTCCAATGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGA AGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGAT TGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGT CTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGG TGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGG TGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTGAGGGACGCCTGTGTTG ATACCTGTGGTACCCTCGCATTGTGTGCTAGAGGCTATGGGGATGGTGGCGCTGCATTGG TTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTG GGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTC TGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTCAAGAATCCCCATTTCATGGCAAAGC CTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACAGAGCAGT CTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAA GGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCT CCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAAACCAG TGCGTGATGCAATTACCCAAGCCATTCAGTTGTGGAAGGTTATTCCAGGGTCTGATACTC CCGAGCCATCAGAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCATCATGATG GTAGAAGTATAAATGATGGTGGATCACGAGACACTTCTTTCAGGAGAGTTGATCCTGCAT CTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGT CTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATT GGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAA AGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAG ACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGT CAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTG AGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCA TAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGGGTGCAA TGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATA TCTTTGATATGTTGCAGGAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCA TGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTATACAATTACTCAAAGTG AAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCAC CGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAA TTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACA TGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTG GGGTTGTGAGATCGGAAAGTGCTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAG CATCAGGGGTTAAGGGAAACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGC TGCAAAATGCATTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGCGTCTGCAT ATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAGAACTG GACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTG GCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCATTGCCTTGGCTTCAACAGGTAGCGG ATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGT TCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCAGCAATCAGAATTG CCATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAG TTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTT CCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGA GTGCACCCATTTCATTTTGTTGTAGCCCTGTAATCTGTGTGACAATGTATACTCGGTTTG GGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAGTTAAGCT TGGATCTTCTGTTGCTAGGAAACGGCTGTTTTTAGCTGTGTTGTGAGATTTGGTCTCATA AGTAGTGATCATTGAGC



consensusID : consensus_4131#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 850
fasta sequence
                              [CTCGAGTGTGGAGNATCTCNTGATCATACTTTGTGGCCATGTACAATAACGCTGGGTTTTAAAAATCTGTGTGGATTATACATCCCGGCGTGACANTTTGTAACCCCTGTACGGNGGTGCCTGTGGAGATTGTGTGAACCNTAGGGATAGTAACTGGAACCCGGTTTCTGTGGAGAAATGGTCAACCTGAAACAACCAANTGGAACTTTTTGTAAGGGGTTNATNNATNTGCCCCCACTTTTGCGTGAATTAACAAAAGTGGTTGATTTGGCATTCCTGTGCTTCAACAGTTACCGNATTTGACCATGAATTATAAACCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCTAACAAGTGGATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGTTGTAGCCCTGTAATCTGTGTGACAATGTATACTCGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAGTTAAGCTTGGATCTTCTGTTGCTAGGAAACCGNCTGTTTTTAGCTGTGTTGTGAGATTTGGTCTCATAAGTAGTGATCATTGAGCTTGTGAATTCATGTTTTGTCATCTTACAAAGGGAATTCATGCTAAAAAAAAAA]

[+] EMBL BM037976             [CTCGAGTGTGGAGNATCTCNTGATCATACTTTGTGGCCATGTACAATAACGCTGGGTTTTAAAAATCTGTGTGGATTATACATCCCGGCGTGACANTTTGTAACCCCTGTACGGNGGTGCCTGTGGAGATTGTGTGAACCNTAGGGATAGTAACTGGAACCCGGTTTCTGTGGAGAAATGGTCAACCTGAAACAACCAANTGGAACTTTTTGTAAGGGGTTNATNNATNTGCCCCCACTTTTGCGTGAATTAACAAAAGTGGTTGATTTGGCATTCCTGTGCTTCAACAGTTACCGNATTTGACCATGAATTATAAACCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCTAACAAGTGGATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGTTGTAGCCCTGTAATCTGTGTGACAATGTATACTCGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAGTTAAGCTTGGATCTTCTGTTGCTAGGAAACCGNCTGTTTTTAGCTGTGTTGTGAGATTTGGTCTCATAAGTAGTGATCATTGAGCTTGTGAATTCATGTTTTGTCATCTTACAAAGGGAATTCATGCTAAAAAAAAAA]


>consensus_4131#1 CTCGAGTGTGGAGNATCTCNTGATCATACTTTGTGGCCATGTACAATAACGCTGGGTTTT AAAAATCTGTGTGGATTATACATCCCGGCGTGACANTTTGTAACCCCTGTACGGNGGTGC CTGTGGAGATTGTGTGAACCNTAGGGATAGTAACTGGAACCCGGTTTCTGTGGAGAAATG GTCAACCTGAAACAACCAANTGGAACTTTTTGTAAGGGGTTNATNNATNTGCCCCCACTT TTGCGTGAATTAACAAAAGTGGTTGATTTGGCATTCCTGTGCTTCAACAGTTACCGNATT TGACCATGAATTATAAACCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGTTC CTTGCTTTATTGGAGGAAGCTGCTAACAAGTGGATCTACAGAGCCAGCAATCAGAATTGC CATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAGT TTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGAAATACTTC CCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAGTGATTGAG TGCACCCATTTCATTTTGTTGTAGCCCTGTAATCTGTGTGACAATGTATACTCGGTTTGG GTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAGTTAAGCTT GGATCTTCTGTTGCTAGGAAACCGNCTGTTTTTAGCTGTGTTGTGAGATTTGGTCTCATA AGTAGTGATCATTGAGCTTGTGAATTCATGTTTTGTCATCTTACAAAGGGAATTCATGCT AAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4131#0      AGGCGAGGAGAGGAGGCGACGGCCGCGAGCGCGAGGCGAGGCTTCCGACTCGAGCAAGGA 60
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GATCCCACTGCTCCAACCAGATCAGGTGATGGGTGGGGAATCTACAGGAAACACGACCTC 120
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CATTCCCCAATGGGAGAAGCCACTGTTCCCCTCAGTATCCATGTTACTCTGAGCTACTGA 180
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GCTCTCTGCTAAGTTGGTGCCTCAGCTGTGTATCTTGCAGCAAGAGTGTTCTAGCCTTCT 240
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      AGGCTGCCAAGATGAAGTCCAATGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGA 300
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      AGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGAT 360
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGT 420
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGG 480
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGG 540
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTGAGGGACGCCTGTGTTG 600
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      ATACCTGTGGTACCCTCGCATTGTGTGCTAGAGGCTATGGGGATGGTGGCGCTGCATTGG 660
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTG 720
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTC 780
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTCAAGAATCCCCATTTCATGGCAAAGC 840
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACAGAGCAGT 900
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAA 960
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCT 1020
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAAACCAG 1080
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGCGTGATGCAATTACCCAAGCCATTCAGTTGTGGAAGGTTATTCCAGGGTCTGATACTC 1140
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CCGAGCCATCAGAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCATCATGATG 1200
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GTAGAAGTATAAATGATGGTGGATCACGAGACACTTCTTTCAGGAGAGTTGATCCTGCAT 1260
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGT 1320
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATT 1380
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAA 1440
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      AGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAG 1500
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      ACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGT 1560
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTG 1620
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      AGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCA 1680
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGGGTGCAA 1740
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATA 1800
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TCTTTGATATGTTGCAGGAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCA 1860
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTATACAATTACTCAAAGTG 1920
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      AAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCAC 1980
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAA 2040
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACA 2100
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      TGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTG 2160
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      GGGTTGTGAGATCGGAAAGTGCTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAG 2220
consensus_4131#1      ------------------------------------------------------------
                                                                                  

consensus_4131#0      CATCAGGGGTTAAGGGAAACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTG-AG 2279
consensus_4131#1      ---------------------CTCGAGTGTGG---AGNATCTCNTGATCATACTTTGTGG 36
                                            ** *** *     *  *  ** **     *   **  *

consensus_4131#0      CTGCAAAATGCATTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGCGTCTGCA 2339
consensus_4131#1      CCATGTACAATAACGCTGGGTTTTAAAAATCTGTGTGGATTATACATCCCGGCGTGACAN 96
                      *     *    *  **  * ** **** *  *   ***     *   *  *****     

consensus_4131#0      TATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAG-AAC 2398
consensus_4131#1      TTTGTA--ACCCCTGTACGGNGGTGCCTGTGGAGATTGTGTGAACCNTAGGGATAGTAAC 154
                      * ****  * ***** ** * **** *****   **    *  **   * ****** ***

consensus_4131#0      TGGA--CCTGTTCTTG---AGAAATTGTCA-CGTGAAACAACAAGT--GAACTTTT---- 2446
consensus_4131#1      TGGAACCCGGTTTCTGTGGAGAAATGGTCAACCTGAAACAACCAANTGGAACTTTTTGTA 214
                      ****  ** ***  **   ****** **** * ********* *    ********    

consensus_4131#0      -GAGGGTTATAGCTGG----CCAGTTTC---TGAATAAA--AAAATGTTTGATTTGGCAT 2496
consensus_4131#1      AGGGGTTNATNNATNTGCCCCCACTTTTGCGTGAATTAACAAAAGTGGTTGATTTGGCAT 274
                       * ** * **   *      *** ***    ***** **  *** ** ************

consensus_4131#0      TGCCTTGGCTTCAACAGGTAGCGGATTTGAGCATGATTTATAAGCC-AAGTCAACTTTTT 2555
consensus_4131#1      T-CCTGTGCTTCAACAGTTACCGNATTTGACCATGAATTATAAACCCAAGTCAACTTTTT 333
                      * ***  ********** ** ** ****** ***** ****** ** *************

consensus_4131#0      GTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGC-AACAAGTGG 2614
consensus_4131#1      GTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCTAACAAGTGG 393
                      ************************************************** *********

consensus_4131#0      ATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGT 2674
consensus_4131#1      ATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGT 453
                      ************************************************************

consensus_4131#0      CTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTAT 2734
consensus_4131#1      CTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTAT 513
                      ************************************************************

consensus_4131#0      CATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAA 2794
consensus_4131#1      CATGGCCACTGCGATGTGAAATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAA 573
                      ************************************************************

consensus_4131#0      CTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGTTGTAGCCCTGTAAT 2854
consensus_4131#1      CTTCAATGTCATGCTGCAGTGATTGAGTGCACCCATTTCATTTTGTTGTAGCCCTGTAAT 633
                      ************************************************************

consensus_4131#0      CTGTGTGACAATGTATACTCGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAA 2914
consensus_4131#1      CTGTGTGACAATGTATACTCGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAA 693
                      ************************************************************

consensus_4131#0      TTCATCTATAGTTTGCTAGTTAAGCTTGGATCTTCTGTTGCTAGGAAAC-GGCTGTTTTT 2973
consensus_4131#1      TTCATCTATAGTTTGCTAGTTAAGCTTGGATCTTCTGTTGCTAGGAAACCGNCTGTTTTT 753
                      ************************************************* * ********

consensus_4131#0      AGCTGTGTTGTGAGATTTGGTCTCATAAGTAGTGATCATTGAGC---------------- 3017
consensus_4131#1      AGCTGTGTTGTGAGATTTGGTCTCATAAGTAGTGATCATTGAGCTTGTGAATTCATGTTT 813
                      ********************************************                

consensus_4131#0      -------------------------------------
consensus_4131#1      TGTCATCTTACAAAGGGAATTCATGCTAAAAAAAAAA 850
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)