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Oryza sativa
cluster # 4143 cluster # 4143       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4143#0 length = 1706 sequences # 3  

consensusID : consensus_4143#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1706
fasta sequence
                              [ACAGGGAAGCAATAGCAACGAATTCAACCAACCAACCAACCAACCCTTCTGCTGCTTCAATCGATCGGCAACAAATCTTTCTGGGTGGTCTGGTGCTCAACTCCCCCATCGCCATTTTATGCCCGAACCTGTTTCTCCAGCCAATTTGATGAGGATTAATTTCCAAACGGGCTCCGATCGATCTCCATGATTAACCATCCGGCGTGGTGATGAGCCGCCGCCGCCGCATCGTCGTCGTCTCCCGATGCATCGCCAGGACGTGAGGACGAAGGAGGCCGAGGAGGAGAGGATGGAGGAGAACAATCTCCTGCATTTTCTAGATAGCCCAAACGCGCATTACAGAAGGAAATGTGAAGAATACGTATCCGCGCATGATGATGAAGCCCATTGCGATGCATCA-GATGTAGATCTGGCCAATGCAAGGGAAAGATTGGAGCATCTGTTGAAACAACCTGCCAACAAGTTCTGTGCAGACTGTGGTACCCCTGATCCAAAATGGGCGGCCTTGCCTTTTGGTGCGTTGATTTGCATAAAGTGCTCTGGAACTCATAGAAGTCTTGGAGTACACATATCAAAGGTAATTTCCGTGAATCTAGACGAATGGACAGATGAAGAGGTCAATTGTTTAGCTGGTTCAGGTGGAAATGCTACGGTGAACACAAGATATGAGGCCTTTTTGCCAGAGAACTTTAAAAAGCCCAGACATGATTGCACAACAGAGGAGCGTTGCAATTTCATTAGGAAAAAGTACGAGTTTCAACAGTTTGTGACTGATCCACAGTTTTCATGCCCTTTACGATTGAATACCAAACACGCACCAGACAAGAATCAGCAGCAGCAAAACTGCAGTGCGCGACATGGTTTTGGCCATGCTTTTAGGAATAGCTGGAAGAGAAAGGACACAGATAACAAAGGACTAAAGAAAATGACGGATGTGGGTATGGTGGAATTTGTTGGATTAATTAAGGTTGATATTAGACGGGGCACAAATCTTGCTGTTCGTGATGTGATGTCAAGTGATCCATATGTTATG-CTTAACCTAGGACACCAAACCATGAAAACGAAGGTGATAAAGAACACCCTGAATCCTGTATGGAATGAAAGACTAATGCTATCGAT-CCCTCACCCGGTGCCGCCTCTTAAATTGCAAGTGTTCGACAAGGACACGTTCAGCTCCGACGACCGGATGGGCGATGTGGAGGTGGACATCCAGCCGCTGATCGCCGCGGCGCGAGAACACGAGAGCTCGGCCGCCATCGCCGGCTCGGTGGAGGTCACGAAGCTGCTGGCGAGCGACGACGGCACGCTGGCCAGGGACAGCGTCATCTCCGTCGTCGACGGCAAGGTGAAGCAGGACATCGCGCTGAGGCTCCAGAACGTGGAGCACGGGGAGCTGGAGATCGAGCTCGAGTGCGTGCCGCTCAGCCAGTAGTATAGCTATAGCTGCTGTACACATTTTATTGCTACTATAGCTGGCCGGGATGAAAAATGCTCGATCTGCATTCGCTGTGGGTTGTGTGATCATATGCATGGAGCTTAATTTGCTTCTGTGTTTTACTCCATGCCTGTATACTTTGTCAAGTTGTGTCATGTTGAGGGCTTAATGTTCATGTCATCGTGTATTAATTAGATATGGTTTGTATAGGTAGGAAATTAAGGGGGAAATGGATCGTCTAAAACAACTCTAATTTTAGGCTTCAATGTTG]

[+] EMBL AK072704             [ACAGGGAAGCAATAGCAACGAATTCAACCAACCAACCAACCAACCCTTCTGCTGCTTCAATCGATCGGCAACAAATCTTTCTGGGTGGTCTGGTGCTCAACTCCCCCATCGCCATTTTATGCCCGAACCTGTTTCTCCAGCCAATTTGATGAGGATTAATTTCCAAACGGGCTCCGATCGATCTCCATGATTAACCATCCGGCGTGGTGATGAGCCGCCGCCGCCGCATCGTCGTCGTCTCCCGATGCATCGCCAGGACGTGAGGACGAAGGAGGCCGAGGAGGAGAGGATGGAGGAGAACAATCTCCTGCATTTTCTAGATAGCCCAAACGCGCATTACAGAAGGAAATGTGAAGAATACGTATCCGCGCATGATGATGAAGCCCATTGCGATGCATCA GATGTAGATCTGGCCAATGCAAGGGAAAGATTGGAGCATCTGTTGAAACAACCTGCCAACAAGTTCTGTGCAGACTGTGGTACCCCTGATCCAAAATGGGCGGCCTTGCCTTTTGGTGCGTTGATTTGCATAAAGTGCTCTGGAACTCATAGAAGTCTTGGAGTACACATATCAAAGGTAATTTCCGTGAATCTAGACGAATGGACAGATGAAGAGGTCAATTGTTTAGCTGGTTCAGGTGGAAATGCTACGGTGAACACAAGATATGAGGCCTTTTTGCCAGAGAACTTTAAAAAGCCCAGACATGATTGCACAACAGAGGAGCGTTGCAATTTCATTAGGAAAAAGTACGAGTTTCAACAGTTTGTGACTGATCCACAGTTTTCATGCCCTTTACGATTGAATACCAAACACGCACCAGACAAGAATCAGCAGCAGCAAAACTGCAGTGCGCGACATGGTTTTGGCCATGCTTTTAGGAATAGCTGGAAGAGAAAGGACACAGATAACAAAGGACTAAAGAAAATGACGGATGTGGGTATGGTGGAATTTGTTGGATTAATTAAGGTTGATATTAGACGGGGCACAAATCTTGCTGTTCGTGATGTGATGTCAAGTGATCCATATGTTATG CTTAACCTAGGACACCAAACCATGAAAACGAAGGTGATAAAGAACACCCTGAATCCTGTATGGAATGAAAGACTAATGCTATCGAT CCCTCACCCGGTGCCGCCTCTTAAATTGCAAGTGTTCGACAAGGACACGTTCAGCTCCGACGACCGGATGGGCGATGTGGAGGTGGACATCCAGCCGCTGATCGCCGCGGCGCGAGAACACGAGAGCTCGGCCGCCATCGCCGGCTCGGTGGAGGTCACGAAGCTGCTGGCGAGCGACGACGGCACGCTGGCCAGGGACAGCGTCATCTCCGTCGTCGACGGCAAGGTGAAGCAGGACATCGCGCTGAGGCTCCAGAACGTGGAGCACGGGGAGCTGGAGATCGAGCTCGAGTGCGTGCCGCTCAGCCAGTAGTATAGCTATAGCTGCTGTACACATTTTATTGCTACTATAGCTGGCCGGGATGAAAAATGCTCGATCTGCATTCGCTGTGGGTTGTGTGATCATATGCATGGAGCTTAATTTGCTTCTGT                                                                                                                                                           ]
[+] EMBL AK121203             [                  CGAGTTCAACCAACCAACCAACCAACCCTTCTGCTGCTTCAATCGATCGGCAACAAATCTTTCTGGGTGGTCTGGTGCTCAACTCCCCCATCGCCATTTTATGCCCGAACCTGTTTCTCCAGCCAATTTGATGAGGATTAATTTCCAAACGGGCTCCGATCGATCTCCATGATTAACCATCCGGCGTGGTGATGAGCCGCCGCCGCCGCATCGTCGTCGTCTCCCGATGCATCGCCAGGACGTGAGGACGAAGGAGGCCGAGGAGGAGAGGATGGAGGAGAACAATCTCCTGCATTTTCTAGATAGCCCAAACGCGCATTACAGAAGGAAATGTGAAGAATACGTATCCGCGCATGATGATGAAGCCCATTGCGATGCATCA GATGTAGATCTGGCCAATGCAAGGGAAAGATTGGAGCATCTGTTGAAACAACCTGCCAACAAGTTCTGTGCAGACTGTGGTACCCCTGATCCAAAATGGGCGGCCTTGCCTTTTGGTGCGTTGATTTGCATAAAGTGCTCTGGAACTCATAGAAGTCTTGGAGTACACATATCAAAGGTAATTTCCGTGAATCTAGACGAATGGACAGATGAAGAGGTCAATTGTTTAGCTGGTTCAGGTGGAAATGCTACGGTGAACACAAGATATGAGGCCTTTTTGCCAGAGAACTTTAAAAAGCCCAGACATGATTGCACAACAGAGGAGCGTTGCAATTTCATTAGGAAAAAGTACGAGTTTCAACAGTTTGTGACTGATCCACAGTTTTCATGCCCTTTACGATTGAATACCAAACACGCACCAGACAAGAATCAGCAGCAGCAAAACTGCAGTGCGCGACATGGTTTTGGCCATGCTTTTAGGAATAGCTGGAAGAGAAAGGACACAGATAACAAAGGACTAAAGAAAATGACGGATGTGGGTATGGTGGAATTTGTTGGATTAATTAAGGTTGATATTAGACGGGGCACAAATCTTGCTGTTCGTGATGTGATGTCAAGTGATCCATATGTTATG CTTAACCTAGGACACCAAACCATGAAAACGAAGGTGATAAAGAACACCCTGAATCCTGTATGGAATGAAAGACTAATGCTATCGAT CCCTCACCCGGTGCCGCCTCTTAAATTGCAAGTGTTCGACAAGGACACGTTCAGCTCCGACGACCGGATGGGCGATGTGGAGGTGGACATCCAGCCGCTGATCGCCGCGGCGCGAGAACACGAGAGCTCGGCCGCCATCGCCGGCTCGGTGGAGGTCACGAAGCTGCTGGCGAGCGACGACGGCACGCTGGCCAGGGACAGCGTCATCTCCGTCGTCGACGGCAAGGTGAAGCAGGACATCGCGCTGAGGCTCCAGAACGTGGAGCACGGGGAGCTGGAGATCGAGCTCGAGTGCGTGCCGCTCAGCCAGTAGTATAGCTATAGCTGCTGTACACATTTTATTGCTACTATAGCTGGCCGGGATGAAAAATGCTCGATCTGCATTCGCTGTGGGTTGTGTGATCATATGCATGGAGCTTAATTTGCTTCTGTGTTTTACTCCATGCCTGTATACTTTGTCAAGTTGTGTCATGTTGAGGGCTTAATGTTCATGTCATCGTGTATTAATTAGATATGGTTTGTATAGGTAGGAAATTAAGGGGGAAATGGATCGTCTAAAACAACTCTAATTTTAGGCTTCAATGTTG]
[+] EMBL CA765504             [                                                                                                                                                                                                                                                                                              AGGATGGAGGAGAACAATCTCCTGCATTTTCTAGATAGCCCAAACGCGCATTACAGAAGGAAATGTGAAGAATACGTATCCGCGCATGATGATGAAGCCCATTGCGATGCATCATGATGTAGATCTGGCCAATGCAAGGGAAAGATTGGAGCATCTGTTGAAACAACCTGCCAACAAGTTCTGTGCAGACTGTGGTACCCCTGATCCAAAATGGGCGGCCTTGCCTTTTGGTGCGTTGATTTGCATAAAGTGCTCTGGAACTCATAGAAGTCTTGGAGTACACATATCAAAGGTAATTTCCGTGAATCTAGACGAATGGACAGATGAAGAGGTCAATTGTTTAGCTGGTTCAGGTGGAAATGCTACGGTGAACACAAGATATGAGGCCTCTTTGCCAGAGAACTTTAAAAAGCCCAGACATGATTGCACAACAGAGGAGCGTTGCAATTTCATTAGGAAAAAGTACGAGTTTCAACAGTTTGTGACTGATCCACAGTTTTCATGCCCTTTACGATTGAATACCAAACACGCACCAGACAAGAATCAGCAGCAGCAAAACTGCAGTGCGCGACATGGTTTTGGCCATGCTTTTAGGAATAGCTGGAAGAGAAAGGACACAGATAACAAAGGACTAAAGAAAATGACGGATGTGGGTATGGTGGAATTTGNTGGATTAATTAANGGTGATATTAGACGGGGCACAAATCTTGCTGNTCGTGATGNGATGTCAAGTGATCCATATGNTATGCCTTAACCTAGGACACCAAACCATGAAAACGAAGGTGATAAAGAACANCCTGNATNCTGTNTGGAATGGAAGACTAATGCTNTCGATNCCTTNACCCGGNGCCGNCTNTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_4143#0 ACAGGGAAGCAATAGCAACGAATTCAACCAACCAACCAACCAACCCTTCTGCTGCTTCAA TCGATCGGCAACAAATCTTTCTGGGTGGTCTGGTGCTCAACTCCCCCATCGCCATTTTAT GCCCGAACCTGTTTCTCCAGCCAATTTGATGAGGATTAATTTCCAAACGGGCTCCGATCG ATCTCCATGATTAACCATCCGGCGTGGTGATGAGCCGCCGCCGCCGCATCGTCGTCGTCT CCCGATGCATCGCCAGGACGTGAGGACGAAGGAGGCCGAGGAGGAGAGGATGGAGGAGAA CAATCTCCTGCATTTTCTAGATAGCCCAAACGCGCATTACAGAAGGAAATGTGAAGAATA CGTATCCGCGCATGATGATGAAGCCCATTGCGATGCATCAGATGTAGATCTGGCCAATGC AAGGGAAAGATTGGAGCATCTGTTGAAACAACCTGCCAACAAGTTCTGTGCAGACTGTGG TACCCCTGATCCAAAATGGGCGGCCTTGCCTTTTGGTGCGTTGATTTGCATAAAGTGCTC TGGAACTCATAGAAGTCTTGGAGTACACATATCAAAGGTAATTTCCGTGAATCTAGACGA ATGGACAGATGAAGAGGTCAATTGTTTAGCTGGTTCAGGTGGAAATGCTACGGTGAACAC AAGATATGAGGCCTTTTTGCCAGAGAACTTTAAAAAGCCCAGACATGATTGCACAACAGA GGAGCGTTGCAATTTCATTAGGAAAAAGTACGAGTTTCAACAGTTTGTGACTGATCCACA GTTTTCATGCCCTTTACGATTGAATACCAAACACGCACCAGACAAGAATCAGCAGCAGCA AAACTGCAGTGCGCGACATGGTTTTGGCCATGCTTTTAGGAATAGCTGGAAGAGAAAGGA CACAGATAACAAAGGACTAAAGAAAATGACGGATGTGGGTATGGTGGAATTTGTTGGATT AATTAAGGTTGATATTAGACGGGGCACAAATCTTGCTGTTCGTGATGTGATGTCAAGTGA TCCATATGTTATGCTTAACCTAGGACACCAAACCATGAAAACGAAGGTGATAAAGAACAC CCTGAATCCTGTATGGAATGAAAGACTAATGCTATCGATCCCTCACCCGGTGCCGCCTCT TAAATTGCAAGTGTTCGACAAGGACACGTTCAGCTCCGACGACCGGATGGGCGATGTGGA GGTGGACATCCAGCCGCTGATCGCCGCGGCGCGAGAACACGAGAGCTCGGCCGCCATCGC CGGCTCGGTGGAGGTCACGAAGCTGCTGGCGAGCGACGACGGCACGCTGGCCAGGGACAG CGTCATCTCCGTCGTCGACGGCAAGGTGAAGCAGGACATCGCGCTGAGGCTCCAGAACGT GGAGCACGGGGAGCTGGAGATCGAGCTCGAGTGCGTGCCGCTCAGCCAGTAGTATAGCTA TAGCTGCTGTACACATTTTATTGCTACTATAGCTGGCCGGGATGAAAAATGCTCGATCTG CATTCGCTGTGGGTTGTGTGATCATATGCATGGAGCTTAATTTGCTTCTGTGTTTTACTC CATGCCTGTATACTTTGTCAAGTTGTGTCATGTTGAGGGCTTAATGTTCATGTCATCGTG TATTAATTAGATATGGTTTGTATAGGTAGGAAATTAAGGGGGAAATGGATCGTCTAAAAC AACTCTAATTTTAGGCTTCAATGTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)