Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 415 cluster # 415       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_415#0 length = 1162 sequences # 2  
consensusID : consensus_415#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1162
fasta sequence 
                              [CGCCCGCTGGAACTAACCCACGGCGCCGCCATCCCCCACGCACAGCAAGAAATCGCTAATCTCCGCCCCCACGCCACTGCTCCGCCTGCCGCGCCGCCCGCCCCACGCCCCACGCTGCACCGCCCGCCGGACCTGATCCCGCCTCACCTCACCGGCGCCGCCCTCCCCCACGCCACCATCGCCGCCCTGCCCCTTCCCATGCCGCGCCGCCCGCCGGACCTGAGCCCGCCTCACCTCACCGGCGCCGCCCTCCCCCACGCCACCATCTCCACGGCCCTCCCCACGCCACCGCCATCCTCCCTCGCCGCCGCCGCCACCGGGGGCGGTTCCCAACTCCGCCTCCCCCACCACGCCTCCCACATCGCGTCACCCCTACCGCCCCGCATCTACCGGCCGACGGTTCCTCCGCGTCGCCGCCGGCTCCTCCCGCGGCACCCCACCCCCATCCCGGCGCTTCTGTCCGTGGAGATCGGCGGGGTAGCCGGCTCGCAAGGTGGAGCATCGATGTGACGTGATGCAGCATTTGGGGAGTCTTTGGTAGAGGTGGAGCGGTGGAGATTCCGACGCCGCCGAAGCCCCACCCAGTGCACATCGGCGTCGCGACTCCCGCCGACGCCCCGCCATCTTCCGACCGGCGCCGCCGCCCGCATCACTGCCGACGCCTCGCCATCGCGCGGCCGCCACGCCAACCGCGACGCCCGCCTCGCCGATCTCCTCCGCGGTCGCTGCCGCCATCTCCACCGGCCACCGCTGTCCTCGGTACGCACTGCTAAGTCCTAACCCACCCATGCCTCTGCCTTGCCGCCGACACCAATAACCCCTGCGTCCGCAGTGCTTCACGTTGACTGGTCATGGAACCAGTGCAGCCCACTCCACTGGCTGGAGCTGCTTCCCTCAGGCTGCCGGAGGTAGCTCGCTGTGCCAGGTTATCAGTCATCTCAAGCAATGTGCTCATTAGGCTATTGTTTGATTCACGTACAGAATCTGTTGCAGTAGTTTAGACGATCTTGCACTATACATTCCTGTATTTACAAAATCTGTTGCAGTGTTTGATTATACATTCGGCATCATATTTTGCATTATATTGTTATTTTCAACTCCTGTATTTACAGAGTGTTGACATGTTATTTGTATTTAGATCCCAGCCAATGTGAATTCTAGA]

[+] EMBL AK111482             [CGCCCGCTGGAACTAACCCACGGCGCCGCCATCCCCCACGCACAGCAAGAAATCGCTAATCTCCGCCCCCACGCCACTGCTCCGCCTGCCGCGCCGCCCGCCCCACGCCCCACGCTGCACCGCCCGCCGGACCTGATCCCGCCTCACCTCACCGGCGCCGCCCTCCCCCACGCCACCATCGCCGCCCTGCCCCTTCCCATGCCGCGCCGCCCGCCGGACCTGAGCCCGCCTCACCTCACCGGCGCCGCCCTCCCCCACGCCACCATCTCCACGGCCCTCCCCACGCCACCGCCATCCTCCCTCGCCGCCGCCGCCACCGGGGGCGGTTCCCAACTCCGCCTCCCCCACCACGCCTCCCACATCGCGTCACCCCTACCGCCCCGCATCTACCGGCCGACGGTTCCTCCGCGTCGCCGCCGGCTCCTCCCGCGGCACCCCACCCCCATCCCGGCGCTTCTGTCCGTGGAGATCGGCGGGGTAGCCGGCTCGCAAGGTGGAGCATCGATGTGACGTGATGCAGCATTTGGGGAGTCTTTGGTAGAGGTGGAGCGGTGGAGATTCCGACGCCGCCGAAGCCCCACCCAGTGCACATCGGCGTCGCGACTCCCGCCGACGCCCCGCCATCTTCCGACCGGCGCCGCCGCCCGCATCACTGCCGACGCCTCGCCATCGCGCGGCCGCCACGCCAACCGCGACGCCCGCCTCGCCGATCTCCTCCGCGGTCGCTGCCGCCATCTCCACCGGCCACCGCTGTCCTCGGTACGCACTGCTAAGTCCTAACCCACCCATGCCTCTGCCTTGCCGCCGACACCAATAACCCCTGCGTCCGCAGTGCTTCACGTTGACTGGTCATGGAACCAGTGCAGCCCACTCCACTGGCTGGAGCTGCTTCCCTCAGGCTGCCGGAGGTAGCTCGCTGTGCCAGGTTATCAGTCATCTCAAGCAATGTGCTCATTAGGCTATTGTTTGATTCACGTACAGAATCTGTTGCAGTAGTTTAGACGATCTTGCACTATACATTCCTGTATTTACAAAATCTGTTGCAGTGTTTGATTATACATTCGGCATCATATTTTGCATTATATTGTTATTTTCAACTCCTGTATTTACAGAGTGTTGACATGTTATTTGTATTTAGATCCCAGCCAATGTGAATTCTAGA]
[+] EMBL CB671687             [                                                                                                                                                 ACCTCACCTGCGCCGCCCTCCCCCACGCCACCATCGCCGCCCTGCCCCTTCCCATGCCGCGCCGCCCGCCGGACCTGAGCCCGCCTCACCTCACCGGCGCCGCCCTCCCCCACGCCACCATCTCCACGGCCCTCCCCACGCCACCGCCATCCTCCCTCGCCGCCGCCGCCACCGGGGGCGGTTCCCAACTCCGCCTCCCCCACCACGCCTCCCACATCGCGTCACCCCTACCGCCCCGCATCTACCGGCCGACGGTTCCTCCGCGTCGCCGCCGGCTCCTCCCGCGGCACCCCACCCCCATCCCGGAGCTTCTGTCCGTGGAGATCGGCGGGGTAGCCGGCTCGCAAGGTGGAGCATCGATGTGACGTGATGCAGCATTTGGGGAGTCTTTGGTAGAGGTGGAGCGGTGGAGATTCCGACGCCGCCGAAGCCCCACCCAGTGCACATCGGCGTCGCGACTCCCGCCGACGCCCCGCCATCTTCCGACCGGCGCCGCCGCGCGCATCACTGCCGACGCCTCGCCATCGCGCGGCCGCCACGCCAACCGCGACGCCCGCCTCGCCGATCTCCTCCGCGGTCGCTGCCGCCATCTCCACCGGCGACCGGTGTCCTCGGTACGCACTGCTAAGTCCTAACCCACCCATGCCTCTGCCTTGCCGCCGACACCAATAACCCCTGCGTCC                                                                                                                                                                                                                                                                                                                                              ]




>consensus_415#0
CGCCCGCTGGAACTAACCCACGGCGCCGCCATCCCCCACGCACAGCAAGAAATCGCTAAT
CTCCGCCCCCACGCCACTGCTCCGCCTGCCGCGCCGCCCGCCCCACGCCCCACGCTGCAC
CGCCCGCCGGACCTGATCCCGCCTCACCTCACCGGCGCCGCCCTCCCCCACGCCACCATC
GCCGCCCTGCCCCTTCCCATGCCGCGCCGCCCGCCGGACCTGAGCCCGCCTCACCTCACC
GGCGCCGCCCTCCCCCACGCCACCATCTCCACGGCCCTCCCCACGCCACCGCCATCCTCC
CTCGCCGCCGCCGCCACCGGGGGCGGTTCCCAACTCCGCCTCCCCCACCACGCCTCCCAC
ATCGCGTCACCCCTACCGCCCCGCATCTACCGGCCGACGGTTCCTCCGCGTCGCCGCCGG
CTCCTCCCGCGGCACCCCACCCCCATCCCGGCGCTTCTGTCCGTGGAGATCGGCGGGGTA
GCCGGCTCGCAAGGTGGAGCATCGATGTGACGTGATGCAGCATTTGGGGAGTCTTTGGTA
GAGGTGGAGCGGTGGAGATTCCGACGCCGCCGAAGCCCCACCCAGTGCACATCGGCGTCG
CGACTCCCGCCGACGCCCCGCCATCTTCCGACCGGCGCCGCCGCCCGCATCACTGCCGAC
GCCTCGCCATCGCGCGGCCGCCACGCCAACCGCGACGCCCGCCTCGCCGATCTCCTCCGC
GGTCGCTGCCGCCATCTCCACCGGCCACCGCTGTCCTCGGTACGCACTGCTAAGTCCTAA
CCCACCCATGCCTCTGCCTTGCCGCCGACACCAATAACCCCTGCGTCCGCAGTGCTTCAC
GTTGACTGGTCATGGAACCAGTGCAGCCCACTCCACTGGCTGGAGCTGCTTCCCTCAGGC
TGCCGGAGGTAGCTCGCTGTGCCAGGTTATCAGTCATCTCAAGCAATGTGCTCATTAGGC
TATTGTTTGATTCACGTACAGAATCTGTTGCAGTAGTTTAGACGATCTTGCACTATACAT
TCCTGTATTTACAAAATCTGTTGCAGTGTTTGATTATACATTCGGCATCATATTTTGCAT
TATATTGTTATTTTCAACTCCTGTATTTACAGAGTGTTGACATGTTATTTGTATTTAGAT
CCCAGCCAATGTGAATTCTAGA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)