Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4165 cluster # 4165       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4165#0 length = 1592 sequences # 1  
consensus_4165#1 length = 668 sequences # 1  
consensus_4165#2 length = 567 sequences # 1  

consensusID : consensus_4165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1592
fasta sequence
                              [CATTTTTTTCCCGTTCAAAAAAAAATATTGACATTTTTTTCCCCAACTGCCGGCGATATGGCCGCTACGGCCGCCTCCTCCCTGTCCGCCGCCGCCGCCGCCGCTCGCCGGAGCTTCCCCTCCCGCCTCCGACTCCTAGCACGCCGCCGCCGCCTCCCGTTCTCGTCCACCGCCTCCTTCTCCGCCGCTGCGCCACCGGCTGCCGCGGCGAGCTTCGGCTGGGAGGACGCCCTCCGGGTCGCCGCCGACGACCGGCGGGGCGACGAGTCCGACCTCTCCGGGTACTCCCGGAAGGTCGACACCTGCAACCGAGGAATGGACAAGAAGGGGGAGTTCGTGGCGTTCATGGTGGAGGATCAGGTTGTGGGGTATATCCACCAAGGTTTTGTTGAACATCTAAGAGACTTCCGTGATGTTTTTACCATTGCCTCGGGCAGCAATGGAAGCAATAATGTTGAACATGTGACTCTCCATTCATCTCTAAGGACTCCAGATGAACGAACAAATGCTGTTGGAAGTGTCATAAGAAGTCTAGGAGATCTGATTCCAGGTATTCGAAATGAGCTCTATCCAATAACATCATCTTATGGCATGCCTGTGTACTTCTCTCTGGAACGTGCTGCTGCCCCCTACTTTGGCTTATGGAGTTCATATGAATGGGTATGTTGAGAAGGAGGGCCAGAAATTTCTTTGGATTGCTAAGAGAAGTGATACGAAGCAGACCTTTCCAGGAATGCTTGATCATCTTGTTGCAGGTGGCCTGCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAGCAATGCTACCTCTGTTGGAGCGATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGTTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGGTAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGGGTATATAAACCCAGATTACCATGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGATTGCTCGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAAGACTTTACTCTGTCAAGTGCTTTCATCTCCTCCAGTGATCACTGTTTGTAATCACATTTGTCGAGCATTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATATGCATACAATCTGAAGCATCAACGGTGGCTCGGATTATCCAACTAGCAAGTGCAAATGTTTGCTTGATATTTGATTTTTGCCAAACAAGTTCGGGTGTTTGATTTGCTTCAGCGAATTTGTGATGATGGACACCAGGCGTTGCGGAAGGTGGATCACATGGCATGGAACCATGGATGGATAGTTCGTCCCTTATCCTGTCTCTTTTTTTTTTTTTCTGGAAAACAGAGGATAGTACTGGATTTGAGTATGAACATAAATAGTGAGGGAATATGAATTCATATATGGAGGA]

[+] EMBL AK067539             [CATTTTTTTCCCGTTCAAAAAAAAATATTGACATTTTTTTCCCCAACTGCCGGCGATATGGCCGCTACGGCCGCCTCCTCCCTGTCCGCCGCCGCCGCCGCCGCTCGCCGGAGCTTCCCCTCCCGCCTCCGACTCCTAGCACGCCGCCGCCGCCTCCCGTTCTCGTCCACCGCCTCCTTCTCCGCCGCTGCGCCACCGGCTGCCGCGGCGAGCTTCGGCTGGGAGGACGCCCTCCGGGTCGCCGCCGACGACCGGCGGGGCGACGAGTCCGACCTCTCCGGGTACTCCCGGAAGGTCGACACCTGCAACCGAGGAATGGACAAGAAGGGGGAGTTCGTGGCGTTCATGGTGGAGGATCAGGTTGTGGGGTATATCCACCAAGGTTTTGTTGAACATCTAAGAGACTTCCGTGATGTTTTTACCATTGCCTCGGGCAGCAATGGAAGCAATAATGTTGAACATGTGACTCTCCATTCATCTCTAAGGACTCCAGATGAACGAACAAATGCTGTTGGAAGTGTCATAAGAAGTCTAGGAGATCTGATTCCAGGTATTCGAAATGAGCTCTATCCAATAACATCATCTTATGGCATGCCTGTGTACTTCTCTCTGGAACGTGCTGCTGCCCCCTACTTTGGCTTATGGAGTTCATATGAATGGGTATGTTGAGAAGGAGGGCCAGAAATTTCTTTGGATTGCTAAGAGAAGTGATACGAAGCAGACCTTTCCAGGAATGCTTGATCATCTTGTTGCAGGTGGCCTGCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAGCAATGCTACCTCTGTTGGAGCGATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGTTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGGTAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGGGTATATAAACCCAGATTACCATGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGATTGCTCGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAAGACTTTACTCTGTCAAGTGCTTTCATCTCCTCCAGTGATCACTGTTTGTAATCACATTTGTCGAGCATTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATATGCATACAATCTGAAGCATCAACGGTGGCTCGGATTATCCAACTAGCAAGTGCAAATGTTTGCTTGATATTTGATTTTTGCCAAACAAGTTCGGGTGTTTGATTTGCTTCAGCGAATTTGTGATGATGGACACCAGGCGTTGCGGAAGGTGGATCACATGGCATGGAACCATGGATGGATAGTTCGTCCCTTATCCTGTCTCTTTTTTTTTTTTTCTGGAAAACAGAGGATAGTACTGGATTTGAGTATGAACATAAATAGTGAGGGAATATGAATTCATATATGGAGGA]


>consensus_4165#0 CATTTTTTTCCCGTTCAAAAAAAAATATTGACATTTTTTTCCCCAACTGCCGGCGATATG GCCGCTACGGCCGCCTCCTCCCTGTCCGCCGCCGCCGCCGCCGCTCGCCGGAGCTTCCCC TCCCGCCTCCGACTCCTAGCACGCCGCCGCCGCCTCCCGTTCTCGTCCACCGCCTCCTTC TCCGCCGCTGCGCCACCGGCTGCCGCGGCGAGCTTCGGCTGGGAGGACGCCCTCCGGGTC GCCGCCGACGACCGGCGGGGCGACGAGTCCGACCTCTCCGGGTACTCCCGGAAGGTCGAC ACCTGCAACCGAGGAATGGACAAGAAGGGGGAGTTCGTGGCGTTCATGGTGGAGGATCAG GTTGTGGGGTATATCCACCAAGGTTTTGTTGAACATCTAAGAGACTTCCGTGATGTTTTT ACCATTGCCTCGGGCAGCAATGGAAGCAATAATGTTGAACATGTGACTCTCCATTCATCT CTAAGGACTCCAGATGAACGAACAAATGCTGTTGGAAGTGTCATAAGAAGTCTAGGAGAT CTGATTCCAGGTATTCGAAATGAGCTCTATCCAATAACATCATCTTATGGCATGCCTGTG TACTTCTCTCTGGAACGTGCTGCTGCCCCCTACTTTGGCTTATGGAGTTCATATGAATGG GTATGTTGAGAAGGAGGGCCAGAAATTTCTTTGGATTGCTAAGAGAAGTGATACGAAGCA GACCTTTCCAGGAATGCTTGATCATCTTGTTGCAGGTGGCCTGCCATATGGAATCTCCTG TGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAG CAATGCTACCTCTGTTGGAGCGATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAG GGATGTTCTCTTCTGTTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGA TGGAGAGGTTGGTAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAG GACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGG GTATATAAACCCAGATTACCATGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGA TTGCTCGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAAGACTTTA CTCTGTCAAGTGCTTTCATCTCCTCCAGTGATCACTGTTTGTAATCACATTTGTCGAGCA TTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATATGCATACAATCTGAAGCA TCAACGGTGGCTCGGATTATCCAACTAGCAAGTGCAAATGTTTGCTTGATATTTGATTTT TGCCAAACAAGTTCGGGTGTTTGATTTGCTTCAGCGAATTTGTGATGATGGACACCAGGC GTTGCGGAAGGTGGATCACATGGCATGGAACCATGGATGGATAGTTCGTCCCTTATCCTG TCTCTTTTTTTTTTTTTCTGGAAAACAGAGGATAGTACTGGATTTGAGTATGAACATAAA TAGTGAGGGAATATGAATTCATATATGGAGGA



consensusID : consensus_4165#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 668
fasta sequence
                              [CTCCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAGCAATGCTACCTCTGTTGGAGCCATTTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGCCATGGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGATTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATCTTAAATTCAACCCTTTACTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCACATTTGTCGAGCCTTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAACCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTTTGCCCAACAAGTTCAGTGTTTGATTTGCTTAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763332             [CTCCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAGCAATGCTACCTCTGTTGGAGCCATTTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGCCATGGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGATTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATCTTAAATTCAACCCTTTACTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCACATTTGTCGAGCCTTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAACCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTTTGCCCAACAAGTTCAGTGTTTGATTTGCTTAAAAAAAAAAAAAAAAAA]


>consensus_4165#1 CTCCCATATGGAATCTCCTGTGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGA ATCCCAAGATCCATTTCAAGCAATGCTACCTCTGTTGGAGCCATTTCTTACATGGATATT GAAGGGTTTAGATACAAAAGGGATGTTCTCTTCTGCTATGACCTTAAACTTCCTCCAGAT TTTGTTCCTAATAATGAAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACAT GCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATT GACTTCCTCTTCCGCCATGGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTG CAAAGCTTGAGGAGAGGTGATTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGG ATCTTAAATTCAACCCTTTACTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGT GTAATCACATTTGTCGAGCCTTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCA TACACATACAATCAGAAGAACCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATG CTTGCTTGATATTTGATTTTTGCCCAACAAGTTCAGTGTTTGATTTGCTTAAAAAAAAAA AAAAAAAA



consensusID : consensus_4165#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence
                              [ACGAGACAAGGGGGTTGGAGCCATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTTTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGACTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAACCCTTTACTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCCCATTTGTCGAGCCTTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAACCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTTTGCCCAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763361             [ACGAGACAAGGGGGTTGGAGCCATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAGGGATGTTCTCTTTTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGATGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAGGACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGGGTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGACTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAACCCTTTACTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCCCATTTGTCGAGCCTTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAACCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTTTGCCCAAAAAAAAAAAAAAAAAAAAAA]


>consensus_4165#2 ACGAGACAAGGGGGTTGGAGCCATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAG GGATGTTCTCTTTTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGA TGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAG GACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGG GTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGA CTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAACCCTTTA CTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCCCATTTGTCGAGCC TTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAA CCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTT TGCCCAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      CATTTTTTTCCCGTTCAAAAAAAAATATTGACATTTTTTTCCCCAACTGCCGGCGATATG 60
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      GCCGCTACGGCCGCCTCCTCCCTGTCCGCCGCCGCCGCCGCCGCTCGCCGGAGCTTCCCC 120
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      TCCCGCCTCCGACTCCTAGCACGCCGCCGCCGCCTCCCGTTCTCGTCCACCGCCTCCTTC 180
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      TCCGCCGCTGCGCCACCGGCTGCCGCGGCGAGCTTCGGCTGGGAGGACGCCCTCCGGGTC 240
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      GCCGCCGACGACCGGCGGGGCGACGAGTCCGACCTCTCCGGGTACTCCCGGAAGGTCGAC 300
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      ACCTGCAACCGAGGAATGGACAAGAAGGGGGAGTTCGTGGCGTTCATGGTGGAGGATCAG 360
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      GTTGTGGGGTATATCCACCAAGGTTTTGTTGAACATCTAAGAGACTTCCGTGATGTTTTT 420
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      ACCATTGCCTCGGGCAGCAATGGAAGCAATAATGTTGAACATGTGACTCTCCATTCATCT 480
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      CTAAGGACTCCAGATGAACGAACAAATGCTGTTGGAAGTGTCATAAGAAGTCTAGGAGAT 540
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      CTGATTCCAGGTATTCGAAATGAGCTCTATCCAATAACATCATCTTATGGCATGCCTGTG 600
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      TACTTCTCTCTGGAACGTGCTGCTGCCCCCTACTTTGGCTTATGGAGTTCATATGAATGG 660
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      GTATGTTGAGAAGGAGGGCCAGAAATTTCTTTGGATTGCTAAGAGAAGTGATACGAAGCA 720
                                                                                  

consensus_4165#1      ----------------------------------------CTCCCATATGGAATCTCCTG 20
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      GACCTTTCCAGGAATGCTTGATCATCTTGTTGCAGGTGGCCTGCCATATGGAATCTCCTG 780
                                                                                  

consensus_4165#1      TGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAG 80
consensus_4165#2      -----------------------------------------------------------A 1
consensus_4165#0      TGAAGAGAATGTTATCAAGGAATGTGAAGAGGAAGCAGGAATCCCAAGATCCATTTCAAG 840
                                                                                  

consensus_4165#1      CAATGCTACCTCTGTTGGAGCCATTTCTTACATGGATATTGAAGGGTTTAGATACAAAAG 140
consensus_4165#2      CGAGACAAGGGG-GTTGGAGCCATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAG 60
consensus_4165#0      CAATGCTACCTCTGTTGGAGCGATCTCTTACATGGATATTGAAGGGTTTAGATACAAAAG 900
                      * *  * *     ******** ** ***********************************

consensus_4165#1      GGATGTTCTCTTCTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGA 200
consensus_4165#2      GGATGTTCTCTTTTGCTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGA 120
consensus_4165#0      GGATGTTCTCTTCTGTTATGACCTTAAACTTCCTCCAGATTTTGTTCCTAATAATGAAGA 960
                      ************ ** ********************************************

consensus_4165#1      TGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAG 260
consensus_4165#2      TGGAGAGGTTGATAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAG 180
consensus_4165#0      TGGAGAGGTTGGTAGCTTCAGATTAATCCCTGTACCACATGCTGCAAATATTATCCGGAG 1020
                      *********** ************************************************

consensus_4165#1      GACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGCCATGG 320
consensus_4165#2      GACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGG 240
consensus_4165#0      GACACATTTTTTCAAGCCAAATTGCAACCTTGTGATTATTGACTTCCTCTTCCGTCATGG 1080
                      ****************************************************** *****

consensus_4165#1      GTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGA 380
consensus_4165#2      GTATATAAACCCAGATTACCTTGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGA 300
consensus_4165#0      GTATATAAACCCAGATTACCATGGCTACCTAAAGCTGCTGCAAAGCTTGAGGAGAGGTGA 1140
                      ******************** ***************************************

consensus_4165#1      TTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATCTTAAATTCAACCCTTTA 440
consensus_4165#2      CTGCTTGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAACCCTTTA 360
consensus_4165#0      TTGCTCGTAGTGCTGCCTTCAGTTCAGACTGATTATGAGGATTTTAAATTCAAGACTTTA 1200
                       **** ************************************ **********  *****

consensus_4165#1      CTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCACATTTGTCGAGCC 500
consensus_4165#2      CTCTGTCAAGTGCTTTCATGTCCTCCAGTGATCGCAGTGTGTAATCCCATTTGTCGAGCC 420
consensus_4165#0      CTCTGTCAAGTGCTTTCATCTCCTCCAGTGATCACTGTTTGTAATCACATTTGTCGAGCA 1260
                      ******************* ************* * ** ******* ************ 

consensus_4165#1      TTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAA 560
consensus_4165#2      TTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATACACATACAATCAGAAGAA 480
consensus_4165#0      TTGGTTCAGATTCTTGAAAACCTTAACCTCCATGGCTCCATATGCATACAATCTGAAGCA 1320
                      ******************************************  ********* **** *

consensus_4165#1      CCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTT 620
consensus_4165#2      CCAACTGTGGCTAGGATTATCCAACTAGCAAGTGCAAATGCTTGCTTGATATTTGATTTT 540
consensus_4165#0      TCAACGGTGGCTCGGATTATCCAACTAGCAAGTGCAAATGTTTGCTTGATATTTGATTTT 1380
                       **** ****** *************************** *******************

consensus_4165#1      TGCCCAACAAGTTCAG-TGTTTGATTTGCTTAAAAAAAAAAAAAAAAAA----------- 668
consensus_4165#2      TGCCCAAAAA---------------------AAAAAAAAAAAAAAAAA------------ 567
consensus_4165#0      TGCCAAACAAGTTCGGGTGTTTGATTTGCTTCAGCGAATTTGTGATGATGGACACCAGGC 1440
                      **** ** **                      *   **      *  *            

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      GTTGCGGAAGGTGGATCACATGGCATGGAACCATGGATGGATAGTTCGTCCCTTATCCTG 1500
                                                                                  

consensus_4165#1      ------------------------------------------------------------
consensus_4165#2      ------------------------------------------------------------
consensus_4165#0      TCTCTTTTTTTTTTTTTCTGGAAAACAGAGGATAGTACTGGATTTGAGTATGAACATAAA 1560
                                                                                  

consensus_4165#1      --------------------------------
consensus_4165#2      --------------------------------
consensus_4165#0      TAGTGAGGGAATATGAATTCATATATGGAGGA 1592
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)