These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4180#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2372 fasta sequence [GGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGGCGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGCGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGAGCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAACAGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGATTTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTGTTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTATCAG] [+] EMBL AK073061 [GGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGGCGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGCGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGAGCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAACAGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGATTTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTGTTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTATCAG] consensusID : consensus_4180#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1919 fasta sequence [GACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTCAATACTCTGTCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTATTAATTAGGAAGACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTTCTGCTTTCAACTGAAACTACTCTG] [+] EMBL AK109643 [GACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTCAATACTCTGTCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTATTAATTAGGAAGACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTTCTGCTTTCAACTGAAACTACTCTG] consensusID : consensus_4180#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1631 fasta sequence [TCAATGTGTCCTACAATAACCTGTCAGGGCCTGTGCCTGTAGCTCTTTCCAGCAAGTTCAATGCCAGCTCGTTCGCGGGAAACATCCAGCTCTGTGGGTACAATGGCTCCGCCATTTGCACCTCCATTTCCTCTCCAGCGACCATGGCGTCGCCGCCGGTGCCTTTGTCGCAGCGGCCAACACGGAAACTCAACAAGAGGGAGCTCATCTTTGCAGTCGGTGGCATCTGCTTGCTGTTCCTGCTCCTCTTCTGCTGCGTCCTCCTCTTCTGGAGGAAAGACAAGCAGGAGAGCGAGTCGCCCAAGAAGGGCGCCAAGGACGCCACCGCCAAGGCGGCGGCCGGGAAGTCCGGAGGCGGCGGTGGCGGCTCGGGCGGCGCCGGTGGTGACGGCGGCGGCAAGCTTGTCCACTTCGACGGGCCGCTCTCGTTCACGGCGGACGACCTGCTGTGCGCGACGGCGGAGATCCTGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACCATGGAGAATGGCACCTTCGTCGCGGTGAAGCGGCTCCGGGAGAAGATCGCCAAGAACCAGAAGGAGTTCGAGGCGGAGGTGAACGCGCTCGGCAAGCTCCGCCACCCCAACCTCCTCGCCCTCAGGGCCTACTACCTCGGCCCCAAGGGCGAGAAGCTCCTCGTCTTCGACTTCATGACCAAGGGCAACTCACCTCCTTCCTCCATGCTCGCGCCCCGGTCAGCCCGGTGGACTGGCCGACGAGGATGAACATCGCGTTGGGCGTGGCCCGTGGGCTGCACCACCTGCACGCGGAGGCGAGCATCGTGCACGGCAACCTGACGAGCAACAACATCCTGCTCGACGAGGGGAACGACGCCAGGATCGCCGACTGCGGCCTGTCGCGCCTCATGAACGCCACGGCCAACTCCAACGTCATCGCCGCGGCGGGCGCGCTGGGCTACCGCGCGCCGGAGCTCTCCAAGCTGAAGAAGGCCAACGCCAAGACGGACATCTACAGCCTCGGCATGATCATGCTCGAGCTCCTCACCGGCAAGTCGCCCGGCGACACGACCAACGGCCTCGACCTGCCGCAGTGGGTGGCCTCTGTCGTGGAGGAGGAGTGGACCAACGAGGTGTTCGACCTTGAGCTCATGAAGGACGCGGCCGCCGCGGGCTCGGAGACCGGCGAGGAGCTCGTGAAGACGCTCAAGCTGGCGCTGCACTGCGTCGATCCTTCACCGGCGGCGAGGCCAGAGGCCCAGCAGGTTCTCAGACAGCTCGAGCAGATCAAGCCCTCGGTGGCAGTATCGGCCTCCTCGTCCTTCACCGGCGAGCCGAGCCAAACCACCGCGACGGCGACGACGATCACCGACGACACAAAATCGACTATTACAGAGTAGTCAGCCTCTTGCAGACTGAAAAGTTTCGGTTCTTAGTTACTTCAGATCATCAATAAGTAGACTCCATAGTCTATTTTTCGGTCTGTATATAAGGCTTTTAGGGGGGTTAGGAGAATTTTGGTGCTCATGCCATTCTTTGATTCCTGAATTCTTTTGTATCTGCCAGAAGCACTCCTTGTTATCAGAAGATGATATGGGAGTGCTGGCTTCTCATTAAGTTTCAGGCAAACTTGTAGTGCTTCAG] [+] EMBL AK107121 [TCAATGTGTCCTACAATAACCTGTCAGGGCCTGTGCCTGTAGCTCTTTCCAGCAAGTTCAATGCCAGCTCGTTCGCGGGAAACATCCAGCTCTGTGGGTACAATGGCTCCGCCATTTGCACCTCCATTTCCTCTCCAGCGACCATGGCGTCGCCGCCGGTGCCTTTGTCGCAGCGGCCAACACGGAAACTCAACAAGAGGGAGCTCATCTTTGCAGTCGGTGGCATCTGCTTGCTGTTCCTGCTCCTCTTCTGCTGCGTCCTCCTCTTCTGGAGGAAAGACAAGCAGGAGAGCGAGTCGCCCAAGAAGGGCGCCAAGGACGCCACCGCCAAGGCGGCGGCCGGGAAGTCCGGAGGCGGCGGTGGCGGCTCGGGCGGCGCCGGTGGTGACGGCGGCGGCAAGCTTGTCCACTTCGACGGGCCGCTCTCGTTCACGGCGGACGACCTGCTGTGCGCGACGGCGGAGATCCTGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACCATGGAGAATGGCACCTTCGTCGCGGTGAAGCGGCTCCGGGAGAAGATCGCCAAGAACCAGAAGGAGTTCGAGGCGGAGGTGAACGCGCTCGGCAAGCTCCGCCACCCCAACCTCCTCGCCCTCAGGGCCTACTACCTCGGCCCCAAGGGCGAGAAGCTCCTCGTCTTCGACTTCATGACCAAGGGCAACTCACCTCCTTCCTCCATGCTCGCGCCCCGGTCAGCCCGGTGGACTGGCCGACGAGGATGAACATCGCGTTGGGCGTGGCCCGTGGGCTGCACCACCTGCACGCGGAGGCGAGCATCGTGCACGGCAACCTGACGAGCAACAACATCCTGCTCGACGAGGGGAACGACGCCAGGATCGCCGACTGCGGCCTGTCGCGCCTCATGAACGCCACGGCCAACTCCAACGTCATCGCCGCGGCGGGCGCGCTGGGCTACCGCGCGCCGGAGCTCTCCAAGCTGAAGAAGGCCAACGCCAAGACGGACATCTACAGCCTCGGCATGATCATGCTCGAGCTCCTCACCGGCAAGTCGCCCGGCGACACGACCAACGGCCTCGACCTGCCGCAGTGGGTGGCCTCTGTCGTGGAGGAGGAGTGGACCAACGAGGTGTTCGACCTTGAGCTCATGAAGGACGCGGCCGCCGCGGGCTCGGAGACCGGCGAGGAGCTCGTGAAGACGCTCAAGCTGGCGCTGCACTGCGTCGATCCTTCACCGGCGGCGAGGCCAGAGGCCCAGCAGGTTCTCAGACAGCTCGAGCAGATCAAGCCCTCGGTGGCAGTATCGGCCTCCTCGTCCTTCACCGGCGAGCCGAGCCAAACCACCGCGACGGCGACGACGATCACCGACGACACAAAATCGACTATTACAGAGTAGTCAGCCTCTTGCAGACTGAAAAGTTTCGGTTCTTAGTTACTTCAGATCATCAATAAGTAGACTCCATAGTCTATTTTTCGGTCTGTATATAAGGCTTTTAGGGGGGTTAGGAGAATTTTGGTGCTCATGCCATTCTTTGATTCCTGAATTCTTTTGTATCTGCCAGAAGCACTCCTTGTTATCAGAAGATGATATGGGAGTGCTGGCTTCTCATTAAGTTTCAGGCAAACTTGTAGTGCTTCAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4180#0 ------------------------------------------------------------ consensus_4180#1 GACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCG 60 consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 ------------------------------------------------------------ consensus_4180#1 GACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCC 120 consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 ------------------------------------------------------------ consensus_4180#1 CCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCG 180 consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 ------------------------------------------------------------ consensus_4180#1 TCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACC 240 consensus_4180#2 -------------------TCAATGTGTCCTACAA-TAACCTGTCAGGGCCTGTGC--CT 38 consensus_4180#0 ------------------------------------------------------------ consensus_4180#1 CCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGG 300 consensus_4180#2 GTAGCTCTTTCCAGCAAGTTCAATGCCAGCTCGTTCGCGGGAAACATCCAGCTCTGTGGG 98 consensus_4180#0 -------------------GGGCAAGGTCGTCGCCATCACC-CTCCCATGGCGCGGCCTC 40 consensus_4180#1 TCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACC-CTCCCATGGCGCGGCCTC 359 consensus_4180#2 T--ACAATGGCTCCGCCATTTGCACCTCCATTTCCTCTCCAGCGACCATGGCGTCGCC-- 154 *** * * ** * * ******** *** consensus_4180#0 GCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGC-CTCAGCCTCCA 99 consensus_4180#1 GCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGC-CTCAGCCTCCA 418 consensus_4180#2 GCCGGTGCCTTTGTCGCAGCGGCCAACACGGAAACTCAACAAGAGGGAGCTCATCTTTGC 214 ***** ** * ** * * * ** ** * * **** * * consensus_4180#0 CGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGG 159 consensus_4180#1 CGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGG 478 consensus_4180#2 AGTCGGTGGCATCTGCTTGCTGTTCCTGCTCCTCTTCTGCTGCGTCCTCCTCTTCTGGAG 274 * * * ***** * * *** * * ** *** * *** * * ** * * consensus_4180#0 CGTCTACCTCTTCAACAACCGCTTCTCCGGC---GCCGTCCCGGCCTCCATTGGCAACTG 216 consensus_4180#1 CGTCTACCTCTTCAACAACCGCTTCTCCGGC---GCCGTCCCGGCCTCCATTGGCAACTG 535 consensus_4180#2 GAAAGACAAGCAGGAGAGCGAGTCGCCCAAGAAGGGCGCCAAGGACGCCACCGCCAA--- 331 ** * * * * ** * ** * ** * *** * *** consensus_4180#0 CGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTC-CGTCCT 275 consensus_4180#1 CGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTC-CGTCCT 594 consensus_4180#2 GGCGGCGGCCGGGAAGTCCGGAGGCGGCGGTGGCGGCTCGGGCGGCGCCGGTGGTGACGG 391 * *** * * ** ** * * ** * * ******* * * * consensus_4180#0 CACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAAC--ACCATCTCCGG 333 consensus_4180#1 CACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAAC--ACCATCTCCGG 652 consensus_4180#2 CGGCGGCAAGCTTGTCCACTTCGACGGGCCGC--TCTCGTTCACGGCGGACGACCTGCTG 449 * ** * ** *** * * *** * *** *** * ** * ** * * consensus_4180#0 CGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAA 393 consensus_4180#1 CGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAA 712 consensus_4180#2 TG-CGCGACGGCGGAGATCCTGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACCAT 508 * * * * *** ** * * * ** ** * * * ** ** consensus_4180#0 CAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTC 453 consensus_4180#1 CAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTC 772 consensus_4180#2 GGAGAATGGCACCTTCGTCGCGGTGA-----AGCGGCTCCGGGAGAAGATCGCCAAGAAC 563 ** * * * ** * * * ******* * ** * * consensus_4180#0 GCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAAC-T 512 consensus_4180#1 GCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAAC-T 831 consensus_4180#2 -CAGAAGGAGTTCGAGGCGGAGGTGAACGCGCTCGGCAAGCTCCGCCACCCCAACCTCCT 622 * ***** * * * * * ** **** * *** * * * ** * * consensus_4180#0 CGCTCG-ATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGAC 571 consensus_4180#1 CGCTCG-ATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGAC 890 consensus_4180#2 CGCCCTCAGGGCCTACTACCTCGGCC-----CCAAGGGCGAGAAGCTCCTCGTCTTCGAC 677 *** * * **** **** * * ** * * ******* * ** * *** consensus_4180#0 CTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTC 631 consensus_4180#1 CTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTC 950 consensus_4180#2 TTCA-TGACCAAGGGCAACTCACCTCCTTCCTCCAT-------GCTCGCGCCCCGG--TC 727 ** ** * * *** * * ** *** * * ****** * *** ** consensus_4180#0 AAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAAC 691 consensus_4180#1 AAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAAC 1010 consensus_4180#2 AGCCCGGTGGAC-TGGCCGACGAGG--ATGAACATCGCG-TTGGGCGTGGCCCGTG-GGC 782 * ** * *** * *** * * * * * * ** * * * *** ** * consensus_4180#0 CTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCA 751 consensus_4180#1 CTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCA 1070 consensus_4180#2 TGCACCACCTGCACGCG-GAGGCGAGCATCGTGCACGGCAACCTGAC--GAGCAACAACA 839 *** ** ** * * * * ** ** ****** * * *** ** consensus_4180#0 GCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGC 811 consensus_4180#1 GCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGC 1130 consensus_4180#2 TCCT-GCTCGACGAGGGGAACGA---CGCCAGGATCGCCGACTGCGGCCTGTC--GCGCC 893 *** ***** ** ** ** ****** * * ** * *** * consensus_4180#0 TACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCA 871 consensus_4180#1 TACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCA 1190 consensus_4180#2 T------CATGAACGCCACGGCCAACTCCAACGTCATCGCCGCGGCGGGCGCGCTGGGCT 947 * * * *** * ** ** * **** * * * **** * consensus_4180#0 CCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCG 931 consensus_4180#1 CCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCG 1250 consensus_4180#2 ACCGCGCG----CCGGAGCTCTCCAAGCTGAA---GAAGGCCAACGCCAAGACGGACATC 1000 ****** * **** * ** * **** ** ***** * * consensus_4180#0 CTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTG 991 consensus_4180#1 CTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTG 1310 consensus_4180#2 TACAGCCTCGGCATGATCATGCTCGAGCTCCTCACCGGCAAGTCGCCCGGCGACACGACC 1060 * * *** * *** ** *** **** * * * *** * ** ** * consensus_4180#0 CTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAG 1051 consensus_4180#1 CTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAG 1370 consensus_4180#2 AACGGCCTCGACCTGCCGCAGTGGGTGGCCTCTGTCGTGGAGGAGGAGTGGACCAACGAG 1120 * * ** * * ** ** * * ** * ** ** * ** ** * ** consensus_4180#0 GCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCG 1111 consensus_4180#1 GCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCG 1430 consensus_4180#2 GTGTTCGAC-------CTTGAGCTCATGAAGGACGCGGCCGCCG--------CGGGCTCG 1165 * ** * **** * ** **** ** * **** *** consensus_4180#0 GGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGGCGGG 1171 consensus_4180#1 GGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGG 1490 consensus_4180#2 GAGACCGGCGAG---GAGCTCGTGAAGACGCTCAAGCTGGCGCTGCACTGCGTCGATCCT 1222 * * * * *** *** ** * * * * **** * *** consensus_4180#0 CCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGC 1231 consensus_4180#1 CCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGC 1550 consensus_4180#2 TCACCGGCGGCGAGGCCAGAGGCCCAGCAG-GTTCTCAGAC--AGCTCGAGCAGATCAAG 1279 * **** * * * ** * ** ** * ** * * * ** * * ** * consensus_4180#0 ACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGC-AGCCTTGTGGCGGTGAAGCG 1290 consensus_4180#1 ACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGC-AGCCTTGTGGCGGTGAAGCG 1609 consensus_4180#2 CCCTCGGTGGCAGTATCGGCCTCCTCGTCCTTCACCGGCGAGCCGAGCCAAACCACCGCG 1339 * * * * * ** * * ** **** **** * *** consensus_4180#0 GCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGG 1350 consensus_4180#1 GCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGG 1669 consensus_4180#2 AC-GGCGACGACGATCACCGACG-ACACAAAA---TCGACTATTACAGAGTAGT------ 1388 * * * ** ******* * * ****** **** * * * ** consensus_4180#0 CAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGA 1410 consensus_4180#1 CAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGA 1729 consensus_4180#2 CAGCCTCTTGCAGACTGAAAAGTTTCGGTTCTTAG----TTACTTCAGATCATCAATAAG 1444 ** ** ** * * * * * * ** * *** ** ** * consensus_4180#0 GAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCG 1470 consensus_4180#1 GAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTC- 1788 consensus_4180#2 TAGACTCCATAGTCTATTTTTCGGTCTGTATATAAGGCTTTTAGGGGGGTTAGG------ 1498 * **** ** *** * * ** ** * * * consensus_4180#0 CGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCG 1530 consensus_4180#1 -------AATACTCTG-TCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTA 1840 consensus_4180#2 -------AGAATTTTG----GTGCTCATGCCATTCTTTGATTC--CTGAATTCTTTTGTA 1545 * * * * * * consensus_4180#0 TGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCA-CCGCCAGCA 1589 consensus_4180#1 TTAATTAGGAA-----GACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTT 1895 consensus_4180#2 TCTGCCAGAAGCA---CTCCTTGTTATCAGAAGATGATATGGGAGTGCTGGCTTCTCATT 1602 * * * * ** * * * * consensus_4180#0 ATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCA 1649 consensus_4180#1 CTGCTTTCAACTGAAACTACTCTG------------------------------------ 1919 consensus_4180#2 AAG-TTTCAGGCAAACTTGTAGTGCTTCAG------------------------------ 1631 * ** consensus_4180#0 TGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCC 1709 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 CCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCA 1769 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 TCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGC 1829 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 CGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGCGTTCGACCTCGAGC 1889 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 TCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGG 1949 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 CGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGC 2009 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 AGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCG 2069 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 CAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGA 2129 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 GCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAAC 2189 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 AGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGAT 2249 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 TTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTG 2309 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 TTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTAT 2369 consensus_4180#1 ------------------------------------------------------------ consensus_4180#2 ------------------------------------------------------------ consensus_4180#0 CAG 2372 consensus_4180#1 --- consensus_4180#2 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||